Task 38683286

Name test_362-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND6100_0
Workunit 31624860
Created 27 Oct 2026, 11:14:56 UTC
Sent 27 Oct 2026, 11:15:02 UTC
Report deadline 1 Nov 2026, 11:15:02 UTC
Received 27 Oct 2026, 12:24:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652945
Run time 22 min 27 sec
CPU time 20 min 58 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 17,844.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 752.07 MB
Peak swap size 9.98 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
13:02:14 (32020): wrapper (7.9.26016): starting
13:02:14 (32020): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
13:02:15 (32020): Library/usr/bin/tar.exe exited; CPU time 0.000000
13:02:15 (32020): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:23:50 (32020): C:/Windows/system32/cmd.exe exited; CPU time 1258.765625
13:23:50 (32020): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 25642065 bytes.
Dumping objects ->
{3835492} normal block at 0x0000020AC6A036C0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x0000020AC6A03AB0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835470} normal block at 0x0000020AC6A03A40, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835459} normal block at 0x0000020AC6A03730, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835448} normal block at 0x0000020AC4AAFFF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835417} normal block at 0x0000020AC6A4D580, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835404} normal block at 0x0000020AC4AB6D80, 8 bytes long.
 Data: <  &#163;&#196;    > 00 00 A3 C4 0A 02 00 00 
{3833967} normal block at 0x0000020AC4AB7320, 8 bytes long.
 Data: <&#240; &#171;&#198;    > F0 00 AB C6 0A 02 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000020AC4AACFC0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000020AC4AA5FE0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000020AC4AB1870, 16 bytes long.
 Data: < &#162;&#171;&#196;            > 98 A2 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000020AC4AB1780, 16 bytes long.
 Data: <p&#162;&#171;&#196;            > 70 A2 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000020AC4AFA420, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x0000020AC4AB1690, 16 bytes long.
 Data: <H&#162;&#171;&#196;            > 48 A2 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000020AC4AB1640, 16 bytes long.
 Data: < &#162;&#171;&#196;            > 20 A2 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000020AC4AB1500, 16 bytes long.
 Data: <&#248;&#161;&#171;&#196;            > F8 A1 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000020AC4AB1B40, 16 bytes long.
 Data: <&#208;&#161;&#171;&#196;            > D0 A1 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000020AC4AB05A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000020AC4AB14B0, 16 bytes long.
 Data: <x8&#171;&#196;            > 78 38 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000020AC4AFABA0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000020AC4AB1820, 16 bytes long.
 Data: <P8&#171;&#196;            > 50 38 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000020AC4AB11E0, 16 bytes long.
 Data: <(8&#171;&#196;            > 28 38 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000020AC4AB13C0, 16 bytes long.
 Data: < 8&#171;&#196;            > 00 38 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000020AC4AB1D70, 16 bytes long.
 Data: <&#216;7&#171;&#196;            > D8 37 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000020AC4AB7460, 16 bytes long.
 Data: <&#176;7&#171;&#196;            > B0 37 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000020AC4AB6DD0, 16 bytes long.
 Data: < 7&#171;&#196;            > 88 37 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000020AC4AFA7E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000020AC4AB7410, 16 bytes long.
 Data: <`7&#171;&#196;            > 60 37 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000020AC4AB3760, 320 bytes long.
 Data: < t&#171;&#196;    &#224;&#167;&#175;&#196;    > 10 74 AB C4 0A 02 00 00 E0 A7 AF C4 0A 02 00 00 
{279} normal block at 0x0000020AC4AB6E20, 16 bytes long.
 Data: <&#176;&#161;&#171;&#196;            > B0 A1 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000020AC4AB73C0, 16 bytes long.
 Data: < &#161;&#171;&#196;            > 88 A1 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000020AC4AFAC60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x0000020AC4AB7190, 16 bytes long.
 Data: <`&#161;&#171;&#196;            > 60 A1 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000020AC4AFA3C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000020AC4AB7280, 16 bytes long.
 Data: <&#168;&#160;&#171;&#196;            > A8 A0 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000020AC4AB74B0, 16 bytes long.
 Data: < &#160;&#171;&#196;            > 80 A0 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000020AC4AB7140, 16 bytes long.
 Data: <X&#160;&#171;&#196;            > 58 A0 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000020AC4AB70F0, 16 bytes long.
 Data: <0&#160;&#171;&#196;            > 30 A0 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000020AC4AB7230, 16 bytes long.
 Data: < &#160;&#171;&#196;            > 08 A0 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000020AC4AB7370, 16 bytes long.
 Data: <&#224;&#159;&#171;&#196;            > E0 9F AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000020AC4AB70A0, 16 bytes long.
 Data: <  &#171;&#196;            > 00 03 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000020AC4AB0300, 40 bytes long.
 Data: <&#160;p&#171;&#196;     &#213;&#164;&#198;    > A0 70 AB C4 0A 02 00 00 80 D5 A4 C6 0A 02 00 00 
{265} normal block at 0x0000020AC4AB7000, 16 bytes long.
 Data: <&#192;&#159;&#171;&#196;            > C0 9F AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000020AC4AB6FB0, 16 bytes long.
 Data: < &#159;&#171;&#196;            > 98 9F AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000020AC4AFA360, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x0000020AC4AB6F60, 16 bytes long.
 Data: <p&#159;&#171;&#196;            > 70 9F AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000020AC4AB9F70, 992 bytes long.
 Data: <`o&#171;&#196;    `&#163;&#175;&#196;    > 60 6F AB C4 0A 02 00 00 60 A3 AF C4 0A 02 00 00 
{97} normal block at 0x0000020AC4AB24E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x0000020AC4AB1AF0, 16 bytes long.
 Data: <&#208; &#171;&#196;            > D0 00 AB C4 0A 02 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000020AC4AB00D0, 40 bytes long.
 Data: <&#240; &#171;&#196;    &#224;$&#171;&#196;    > F0 1A AB C4 0A 02 00 00 E0 24 AB C4 0A 02 00 00 
{74} normal block at 0x0000020AC4AB1F00, 16 bytes long.
 Data: < &#234;i(&#247;           > 80 EA 69 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000020AC4AB1E10, 16 bytes long.
 Data: <@&#233;i(&#247;           > 40 E9 69 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000020AC4AB10A0, 16 bytes long.
 Data: <&#248;Wf(&#247;           > F8 57 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000020AC4AB1F50, 16 bytes long.
 Data: <&#216;Wf(&#247;           > D8 57 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000020AC4AB15A0, 16 bytes long.
 Data: <P f(&#247;           > 50 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000020AC4AB1050, 16 bytes long.
 Data: <0 f(&#247;           > 30 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000020AC4AB1280, 16 bytes long.
 Data: <&#224; f(&#247;           > E0 02 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000020AC4AB1BE0, 16 bytes long.
 Data: <  f(&#247;           > 10 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000020AC4AB1B90, 16 bytes long.
 Data: <p f(&#247;           > 70 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000020AC4AB1140, 16 bytes long.
 Data: < &#192;d(&#247;           > 18 C0 64 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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