Task 38680830

Name test_450-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND3840_0
Workunit 31622530
Created 27 Oct 2026, 1:45:29 UTC
Sent 27 Oct 2026, 1:45:33 UTC
Report deadline 1 Nov 2026, 1:45:33 UTC
Received 27 Oct 2026, 2:59:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652945
Run time 24 min 32 sec
CPU time 22 min 56 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 17,844.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 751.41 MB
Peak swap size 9.98 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
03:35:17 (15696): wrapper (7.9.26016): starting
03:35:17 (15696): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:35:18 (15696): Library/usr/bin/tar.exe exited; CPU time 0.015625
03:35:18 (15696): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
03:58:57 (15696): C:/Windows/system32/cmd.exe exited; CPU time 1376.859375
03:58:57 (15696): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27469965 bytes.
Dumping objects ->
{3835492} normal block at 0x0000015F97BD2F50, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835481} normal block at 0x0000015F97BD3B20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835470} normal block at 0x0000015F97BD35E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835459} normal block at 0x0000015F97BD31F0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835448} normal block at 0x0000015F95D90610, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835417} normal block at 0x0000015F97C1AE00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835404} normal block at 0x0000015F95D96E20, 8 bytes long.
 Data: <  &#193;&#149;_   > 00 00 C1 95 5F 01 00 00 
{3833967} normal block at 0x0000015F95D97460, 8 bytes long.
 Data: <&#240; &#200;&#151;_   > F0 00 C8 97 5F 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000015F95D8CE80, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000015F95D86460, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000015F95D91A00, 16 bytes long.
 Data: < &#162;&#217;&#149;_           > 98 A2 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000015F95D91960, 16 bytes long.
 Data: <p&#162;&#217;&#149;_           > 70 A2 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000015F95DDA840, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x0000015F95D91910, 16 bytes long.
 Data: <H&#162;&#217;&#149;_           > 48 A2 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000015F95D918C0, 16 bytes long.
 Data: < &#162;&#217;&#149;_           > 20 A2 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000015F95D91870, 16 bytes long.
 Data: <&#248;&#161;&#217;&#149;_           > F8 A1 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000015F95D91820, 16 bytes long.
 Data: <&#208;&#161;&#217;&#149;_           > D0 A1 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000015F95D90060, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000015F95D917D0, 16 bytes long.
 Data: <x8&#217;&#149;_           > 78 38 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000015F95DDA960, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000015F95D91730, 16 bytes long.
 Data: <P8&#217;&#149;_           > 50 38 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000015F95D914B0, 16 bytes long.
 Data: <(8&#217;&#149;_           > 28 38 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000015F95D912D0, 16 bytes long.
 Data: < 8&#217;&#149;_           > 00 38 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000015F95D916E0, 16 bytes long.
 Data: <&#216;7&#217;&#149;_           > D8 37 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000015F95D96DD0, 16 bytes long.
 Data: <&#176;7&#217;&#149;_           > B0 37 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000015F95D96F60, 16 bytes long.
 Data: < 7&#217;&#149;_           > 88 37 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000015F95DDA5A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000015F95D96D80, 16 bytes long.
 Data: <`7&#217;&#149;_           > 60 37 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000015F95D93760, 320 bytes long.
 Data: < m&#217;&#149;_   &#160;&#165;&#221;&#149;_   > 80 6D D9 95 5F 01 00 00 A0 A5 DD 95 5F 01 00 00 
{279} normal block at 0x0000015F95D974B0, 16 bytes long.
 Data: <&#176;&#161;&#217;&#149;_           > B0 A1 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000015F95D97410, 16 bytes long.
 Data: < &#161;&#217;&#149;_           > 88 A1 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000015F95DDA900, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x0000015F95D970F0, 16 bytes long.
 Data: <`&#161;&#217;&#149;_           > 60 A1 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000015F95DDA780, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000015F95D97000, 16 bytes long.
 Data: <&#168;&#160;&#217;&#149;_           > A8 A0 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000015F95D97370, 16 bytes long.
 Data: < &#160;&#217;&#149;_           > 80 A0 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000015F95D971E0, 16 bytes long.
 Data: <X&#160;&#217;&#149;_           > 58 A0 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000015F95D970A0, 16 bytes long.
 Data: <0&#160;&#217;&#149;_           > 30 A0 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000015F95D97190, 16 bytes long.
 Data: < &#160;&#217;&#149;_           > 08 A0 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000015F95D97320, 16 bytes long.
 Data: <&#224;&#159;&#217;&#149;_           > E0 9F D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000015F95D97050, 16 bytes long.
 Data: <&#240;&#255;&#216;&#149;_           > F0 FF D8 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000015F95D8FFF0, 40 bytes long.
 Data: <Pp&#217;&#149;_    &#174;&#193;&#151;_   > 50 70 D9 95 5F 01 00 00 00 AE C1 97 5F 01 00 00 
{265} normal block at 0x0000015F95D97140, 16 bytes long.
 Data: <&#192;&#159;&#217;&#149;_           > C0 9F D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000015F95D97280, 16 bytes long.
 Data: < &#159;&#217;&#149;_           > 98 9F D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000015F95DDAA80, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x0000015F95D96FB0, 16 bytes long.
 Data: <p&#159;&#217;&#149;_           > 70 9F D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000015F95D99F70, 992 bytes long.
 Data: <&#176;o&#217;&#149;_    &#170;&#221;&#149;_   > B0 6F D9 95 5F 01 00 00 80 AA DD 95 5F 01 00 00 
{97} normal block at 0x0000015F95D92480, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x0000015F95D910F0, 16 bytes long.
 Data: <&#224; &#217;&#149;_           > E0 03 D9 95 5F 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000015F95D903E0, 40 bytes long.
 Data: <&#240; &#217;&#149;_    $&#217;&#149;_   > F0 10 D9 95 5F 01 00 00 80 24 D9 95 5F 01 00 00 
{74} normal block at 0x0000015F95D91050, 16 bytes long.
 Data: < &#234;i(&#247;           > 80 EA 69 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000015F95D91D70, 16 bytes long.
 Data: <@&#233;i(&#247;           > 40 E9 69 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000015F95D913C0, 16 bytes long.
 Data: <&#248;Wf(&#247;           > F8 57 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000015F95D91D20, 16 bytes long.
 Data: <&#216;Wf(&#247;           > D8 57 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000015F95D91280, 16 bytes long.
 Data: <P f(&#247;           > 50 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000015F95D91E10, 16 bytes long.
 Data: <0 f(&#247;           > 30 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000015F95D91230, 16 bytes long.
 Data: <&#224; f(&#247;           > E0 02 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000015F95D91C80, 16 bytes long.
 Data: <  f(&#247;           > 10 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000015F95D91FA0, 16 bytes long.
 Data: <p f(&#247;           > 70 04 66 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000015F95D915F0, 16 bytes long.
 Data: < &#192;d(&#247;           > 18 C0 64 28 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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