Task 38672324

Name test_907-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND1048_0
Workunit 31614478
Created 25 Oct 2026, 23:05:15 UTC
Sent 25 Oct 2026, 23:05:19 UTC
Report deadline 30 Oct 2026, 23:05:19 UTC
Received 26 Oct 2026, 0:50:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648022
Run time 25 min 5 sec
CPU time 22 min 9 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 18,986.54 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 805.33 MB
Peak swap size 10.01 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
02:20:47 (25596): wrapper (7.9.26016): starting
02:20:47 (25596): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
02:20:48 (25596): Library/usr/bin/tar.exe exited; CPU time 0.015625
02:20:48 (25596): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:44:59 (25596): C:/Windows/system32/cmd.exe exited; CPU time 1329.625000
02:44:59 (25596): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36055577 bytes.
Dumping objects ->
{3835491} normal block at 0x00000186F9054550, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835480} normal block at 0x00000186F9054780, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835469} normal block at 0x00000186F9054BE0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835458} normal block at 0x00000186F7134D20, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835447} normal block at 0x00000186F7135340, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835416} normal block at 0x00000186F8FFBC10, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835403} normal block at 0x00000186F712D9F0, 8 bytes long.
 Data: <  o&#247;&#134;   > 00 00 6F F7 86 01 00 00 
{3833963} normal block at 0x00000186F712E260, 8 bytes long.
 Data: < F &#247;&#134;   > 90 46 13 F7 86 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000186F7131480, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000186F7126C50, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000186F7136200, 16 bytes long.
 Data: <8k &#247;&#134;           > 38 6B 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000186F7135D00, 16 bytes long.
 Data: < k &#247;&#134;           > 10 6B 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000186F712F3F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000186F71358A0, 16 bytes long.
 Data: <&#232;j &#247;&#134;           > E8 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000186F7135F30, 16 bytes long.
 Data: <&#192;j &#247;&#134;           > C0 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000186F7136750, 16 bytes long.
 Data: < j &#247;&#134;           > 98 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000186F7136160, 16 bytes long.
 Data: <pj &#247;&#134;           > 70 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000186F7134D90, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000186F7136700, 16 bytes long.
 Data: <(&#235; &#247;&#134;           > 28 EB 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000186F712FF30, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000186F7135EE0, 16 bytes long.
 Data: < &#235; &#247;&#134;           > 00 EB 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000186F71358F0, 16 bytes long.
 Data: <&#216;&#234; &#247;&#134;           > D8 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000186F7135940, 16 bytes long.
 Data: <&#176;&#234; &#247;&#134;           > B0 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000186F7135C60, 16 bytes long.
 Data: < &#234; &#247;&#134;           > 88 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000186F7136570, 16 bytes long.
 Data: <`&#234; &#247;&#134;           > 60 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000186F7135B20, 16 bytes long.
 Data: <8&#234; &#247;&#134;           > 38 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000186F712F7B0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000186F71365C0, 16 bytes long.
 Data: < &#234; &#247;&#134;           > 10 EA 11 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000186F711EA10, 320 bytes long.
 Data: <&#192;e &#247;&#134;   &#176;&#247; &#247;&#134;   > C0 65 13 F7 86 01 00 00 B0 F7 12 F7 86 01 00 00 
{277} normal block at 0x00000186F7135B70, 16 bytes long.
 Data: <Pj &#247;&#134;           > 50 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000186F7135E90, 16 bytes long.
 Data: <(j &#247;&#134;           > 28 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000186F712FBD0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000186F71362F0, 16 bytes long.
 Data: < j &#247;&#134;           > 00 6A 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000186F712FFF0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000186F7136610, 16 bytes long.
 Data: <Hi &#247;&#134;           > 48 69 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000186F71359E0, 16 bytes long.
 Data: < i &#247;&#134;           > 20 69 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000186F7136430, 16 bytes long.
 Data: <&#248;h &#247;&#134;           > F8 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000186F7135F80, 16 bytes long.
 Data: <&#208;h &#247;&#134;           > D0 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000186F7135850, 16 bytes long.
 Data: <&#168;h &#247;&#134;           > A8 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000186F7135AD0, 16 bytes long.
 Data: < h &#247;&#134;           > 80 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000186F7135E40, 16 bytes long.
 Data: <`R &#247;&#134;           > 60 52 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000186F7135260, 40 bytes long.
 Data: <@^ &#247;&#134;    &#188;&#255;&#248;&#134;   > 40 5E 13 F7 86 01 00 00 10 BC FF F8 86 01 00 00 
{263} normal block at 0x00000186F7136660, 16 bytes long.
 Data: <`h &#247;&#134;           > 60 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000186F71366B0, 16 bytes long.
 Data: <8h &#247;&#134;           > 38 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000186F712F750, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000186F7136110, 16 bytes long.
 Data: < h &#247;&#134;           > 10 68 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000186F7136810, 992 bytes long.
 Data: < a &#247;&#134;   P&#247; &#247;&#134;   > 10 61 13 F7 86 01 00 00 50 F7 12 F7 86 01 00 00 
{95} normal block at 0x00000186F712FCF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000186F712D9A0, 16 bytes long.
 Data: <0P &#247;&#134;           > 30 50 13 F7 86 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000186F7135030, 40 bytes long.
 Data: <&#160;&#217; &#247;&#134;   &#240;&#252; &#247;&#134;   > A0 D9 12 F7 86 01 00 00 F0 FC 12 F7 86 01 00 00 
{72} normal block at 0x00000186F712DC70, 16 bytes long.
 Data: < &#234;&#249;P&#246;           > 80 EA F9 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000186F712E2B0, 16 bytes long.
 Data: <@&#233;&#249;P&#246;           > 40 E9 F9 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000186F712E300, 16 bytes long.
 Data: <&#248;W&#246;P&#246;           > F8 57 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000186F712DA40, 16 bytes long.
 Data: <&#216;W&#246;P&#246;           > D8 57 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000186F712DCC0, 16 bytes long.
 Data: <P &#246;P&#246;           > 50 04 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000186F712D900, 16 bytes long.
 Data: <0 &#246;P&#246;           > 30 04 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000186F712D8B0, 16 bytes long.
 Data: <&#224; &#246;P&#246;           > E0 02 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000186F712D950, 16 bytes long.
 Data: <  &#246;P&#246;           > 10 04 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000186F712DE00, 16 bytes long.
 Data: <p &#246;P&#246;           > 70 04 F6 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000186F712D400, 16 bytes long.
 Data: < &#192;&#244;P&#246;           > 18 C0 F4 50 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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