Task 38699935

Name test_794-GPUGRID_TEST_ATM_40STEP_20261023-38-40-RND6563_0
Workunit 31640282
Created 6 Nov 2026, 6:53:52 UTC
Sent 6 Nov 2026, 6:53:59 UTC
Report deadline 11 Nov 2026, 6:53:59 UTC
Received 6 Nov 2026, 23:22:18 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 643641
Run time 37 min 34 sec
CPU time 35 min 36 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 16,200.74 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 724.81 MB
Peak swap size 9.91 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:45:51 (153684): wrapper (7.9.26016): starting
17:45:51 (153684): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:45:52 (153684): Library/usr/bin/tar.exe exited; CPU time 0.046875
17:45:52 (153684): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\30\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\30\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:21:54 (153684): C:/Windows/system32/cmd.exe exited; CPU time 2136.468750
18:21:54 (153684): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 51048641 bytes.
Dumping objects ->
{3835230} normal block at 0x000002B8A4F14590, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835219} normal block at 0x000002B8A4F14C20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835208} normal block at 0x000002B8A4F14520, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835197} normal block at 0x000002B8A30E4C60, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835186} normal block at 0x000002B8A30E4B10, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835155} normal block at 0x000002B8A4EBB350, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835142} normal block at 0x000002B8A30DEF10, 8 bytes long.
 Data: <  n&#163;&#184;   > 00 00 6E A3 B8 02 00 00 
{3833957} normal block at 0x000002B8A30DF820, 8 bytes long.
 Data: <&#192;&#223;&#220;&#164;&#184;   > C0 DF DC A4 B8 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000002B8A30E17F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002B8A30D6C30, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000002B8A30E6100, 16 bytes long.
 Data: <8X &#163;&#184;           > 38 58 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002B8A30E5A70, 16 bytes long.
 Data: < X &#163;&#184;           > 10 58 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002B8A30DFD20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000002B8A30E5F70, 16 bytes long.
 Data: <&#232;W &#163;&#184;           > E8 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002B8A30E6650, 16 bytes long.
 Data: <&#192;W &#163;&#184;           > C0 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002B8A30E6380, 16 bytes long.
 Data: < W &#163;&#184;           > 98 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002B8A30E6290, 16 bytes long.
 Data: <pW &#163;&#184;           > 70 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002B8A30E4DB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000002B8A30E6740, 16 bytes long.
 Data: <&#232;&#231; &#163;&#184;           > E8 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002B8A30E0620, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000002B8A30E5F20, 16 bytes long.
 Data: <&#192;&#231; &#163;&#184;           > C0 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002B8A30E5B60, 16 bytes long.
 Data: < &#231; &#163;&#184;           > 98 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002B8A30E5ED0, 16 bytes long.
 Data: <p&#231; &#163;&#184;           > 70 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002B8A30E60B0, 16 bytes long.
 Data: <H&#231; &#163;&#184;           > 48 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002B8A30E61F0, 16 bytes long.
 Data: < &#231; &#163;&#184;           > 20 E7 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002B8A30E59D0, 16 bytes long.
 Data: <&#248;&#230; &#163;&#184;           > F8 E6 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002B8A30DFFC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000002B8A30E6010, 16 bytes long.
 Data: <&#208;&#230; &#163;&#184;           > D0 E6 0D A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002B8A30DE6D0, 320 bytes long.
 Data: < ` &#163;&#184;   &#192;&#255; &#163;&#184;   > 10 60 0E A3 B8 02 00 00 C0 FF 0D A3 B8 02 00 00 
{274} normal block at 0x000002B8A30E5CF0, 16 bytes long.
 Data: <PW &#163;&#184;           > 50 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002B8A30E6330, 16 bytes long.
 Data: <(W &#163;&#184;           > 28 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002B8A30E07A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000002B8A30E6470, 16 bytes long.
 Data: < W &#163;&#184;           > 00 57 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002B8A30DFE40, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000002B8A30E5E80, 16 bytes long.
 Data: <HV &#163;&#184;           > 48 56 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002B8A30E62E0, 16 bytes long.
 Data: < V &#163;&#184;           > 20 56 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002B8A30E5980, 16 bytes long.
 Data: <&#248;U &#163;&#184;           > F8 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002B8A30E68D0, 16 bytes long.
 Data: <&#208;U &#163;&#184;           > D0 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002B8A30E66F0, 16 bytes long.
 Data: <&#168;U &#163;&#184;           > A8 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002B8A30DF230, 16 bytes long.
 Data: < U &#163;&#184;           > 80 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002B8A30DEF60, 16 bytes long.
 Data: <&#224;O &#163;&#184;           > E0 4F 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002B8A30E4FE0, 40 bytes long.
 Data: <`&#239; &#163;&#184;   P&#179;&#235;&#164;&#184;   > 60 EF 0D A3 B8 02 00 00 50 B3 EB A4 B8 02 00 00 
{260} normal block at 0x000002B8A30DF910, 16 bytes long.
 Data: <`U &#163;&#184;           > 60 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002B8A30DF730, 16 bytes long.
 Data: <8U &#163;&#184;           > 38 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002B8A30DFC00, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000002B8A30DF6E0, 16 bytes long.
 Data: < U &#163;&#184;           > 10 55 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002B8A30E5510, 992 bytes long.
 Data: <&#224;&#246; &#163;&#184;    &#252; &#163;&#184;   > E0 F6 0D A3 B8 02 00 00 00 FC 0D A3 B8 02 00 00 
{92} normal block at 0x000002B8A30E08C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000002B8A30DED30, 16 bytes long.
 Data: < N &#163;&#184;           > 20 4E 0E A3 B8 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000002B8A30E4E20, 40 bytes long.
 Data: <0&#237; &#163;&#184;   &#192;  &#163;&#184;   > 30 ED 0D A3 B8 02 00 00 C0 08 0E A3 B8 02 00 00 
{69} normal block at 0x000002B8A30DEBF0, 16 bytes long.
 Data: < &#234;^&#130;&#247;           > 80 EA 5E 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002B8A30DF280, 16 bytes long.
 Data: <@&#233;^&#130;&#247;           > 40 E9 5E 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002B8A30DF7D0, 16 bytes long.
 Data: <&#248;W[&#130;&#247;           > F8 57 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002B8A30DF4B0, 16 bytes long.
 Data: <&#216;W[&#130;&#247;           > D8 57 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002B8A30DF500, 16 bytes long.
 Data: <P [&#130;&#247;           > 50 04 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002B8A30DEA10, 16 bytes long.
 Data: <0 [&#130;&#247;           > 30 04 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002B8A30DED80, 16 bytes long.
 Data: <&#224; [&#130;&#247;           > E0 02 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002B8A30DF2D0, 16 bytes long.
 Data: <  [&#130;&#247;           > 10 04 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002B8A30DF960, 16 bytes long.
 Data: <p [&#130;&#247;           > 70 04 5B 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002B8A30DEBA0, 16 bytes long.
 Data: < &#192;Y&#130;&#247;           > 18 C0 59 82 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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