Task 38699716

Name test_474-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND8718_0
Workunit 31640092
Created 5 Nov 2026, 7:16:34 UTC
Sent 5 Nov 2026, 7:16:36 UTC
Report deadline 10 Nov 2026, 7:16:36 UTC
Received 5 Nov 2026, 7:44:33 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 578932
Run time 24 min 55 sec
CPU time 23 min 45 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 34,102.83 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 718.98 MB
Peak swap size 10.01 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:20:11 (52924): wrapper (7.9.26016): starting
07:20:11 (52924): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:20:12 (52924): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:20:12 (52924): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:44:06 (52924): C:/Windows/system32/cmd.exe exited; CPU time 1425.968750
07:44:06 (52924): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36464195 bytes.
Dumping objects ->
{3835293} normal block at 0x00000297C6B88A20, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835282} normal block at 0x00000297C881A520, 32 bytes long.
 Data: <HOME=D:\BOINC\sl> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835271} normal block at 0x00000297C881B1E0, 32 bytes long.
 Data: <TMP=D:\BOINC\slo> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 6F 
{3835260} normal block at 0x00000297C881AE20, 32 bytes long.
 Data: <TEMP=D:\BOINC\sl> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
{3835249} normal block at 0x00000297C881B360, 32 bytes long.
 Data: <TMPDIR=D:\BOINC\> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 5C 
{3835218} normal block at 0x00000297C6B892E0, 48 bytes long.
 Data: <PATH=D:\BOINC\sl> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 5C 73 6C 
..\api\boinc_api.cpp(309) : {3835205} normal block at 0x00000297C6B79F40, 8 bytes long.
 Data: <  &#180;&#198;&#151;   > 00 00 B4 C6 97 02 00 00 
{3833998} normal block at 0x00000297C6B7A3A0, 8 bytes long.
 Data: < |&#130;&#200;&#151;   > 10 7C 82 C8 97 02 00 00 
..\zip\boinc_zip.cpp(122) : {328} normal block at 0x00000297C6B86100, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{313} normal block at 0x00000297C6B87180, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{312} normal block at 0x00000297C6B881D0, 16 bytes long.
 Data: < &#135;&#184;&#198;&#151;           > 18 87 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{311} normal block at 0x00000297C6B877D0, 16 bytes long.
 Data: <&#240;&#134;&#184;&#198;&#151;           > F0 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{310} normal block at 0x00000297C6B7FC40, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{309} normal block at 0x00000297C6B87AF0, 16 bytes long.
 Data: <&#200;&#134;&#184;&#198;&#151;           > C8 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{308} normal block at 0x00000297C6B88180, 16 bytes long.
 Data: <&#160;&#134;&#184;&#198;&#151;           > A0 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{307} normal block at 0x00000297C6B88130, 16 bytes long.
 Data: <x&#134;&#184;&#198;&#151;           > 78 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{306} normal block at 0x00000297C6B87B90, 16 bytes long.
 Data: <P&#134;&#184;&#198;&#151;           > 50 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{305} normal block at 0x00000297C6B88E10, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{304} normal block at 0x00000297C6B87F00, 16 bytes long.
 Data: < q&#184;&#198;&#151;           > 18 71 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x00000297C6B809C0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{302} normal block at 0x00000297C6B87A50, 16 bytes long.
 Data: <&#240;p&#184;&#198;&#151;           > F0 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x00000297C6B88040, 16 bytes long.
 Data: <&#200;p&#184;&#198;&#151;           > C8 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000297C6B87780, 16 bytes long.
 Data: <&#160;p&#184;&#198;&#151;           > A0 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000297C6B87EB0, 16 bytes long.
 Data: <xp&#184;&#198;&#151;           > 78 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000297C6B87FA0, 16 bytes long.
 Data: <Pp&#184;&#198;&#151;           > 50 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000297C6B878C0, 16 bytes long.
 Data: <(p&#184;&#198;&#151;           > 28 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000297C6B802A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{294} normal block at 0x00000297C6B87730, 16 bytes long.
 Data: < p&#184;&#198;&#151;           > 00 70 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000297C6B87000, 320 bytes long.
 Data: <0w&#184;&#198;&#151;   &#160; &#184;&#198;&#151;   > 30 77 B8 C6 97 02 00 00 A0 02 B8 C6 97 02 00 00 
{292} normal block at 0x00000297C6B87E60, 16 bytes long.
 Data: <0&#134;&#184;&#198;&#151;           > 30 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000297C6B87550, 16 bytes long.
 Data: < &#134;&#184;&#198;&#151;           > 08 86 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000297C6B80180, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{289} normal block at 0x00000297C6B87820, 16 bytes long.
 Data: <&#224;&#133;&#184;&#198;&#151;           > E0 85 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000297C6B7FD60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{287} normal block at 0x00000297C6B87D70, 16 bytes long.
 Data: <(&#133;&#184;&#198;&#151;           > 28 85 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000297C6B879B0, 16 bytes long.
 Data: < &#133;&#184;&#198;&#151;           > 00 85 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000297C6B87C30, 16 bytes long.
 Data: <&#216;&#132;&#184;&#198;&#151;           > D8 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000297C6B874B0, 16 bytes long.
 Data: <&#176;&#132;&#184;&#198;&#151;           > B0 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000297C6B876E0, 16 bytes long.
 Data: < &#132;&#184;&#198;&#151;           > 88 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000297C6B87CD0, 16 bytes long.
 Data: <`&#132;&#184;&#198;&#151;           > 60 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000297C6B873C0, 16 bytes long.
 Data: <&#176;&#137;&#184;&#198;&#151;           > B0 89 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000297C6B889B0, 40 bytes long.
 Data: <&#192;s&#184;&#198;&#151;   &#224;&#146;&#184;&#198;&#151;   > C0 73 B8 C6 97 02 00 00 E0 92 B8 C6 97 02 00 00 
{278} normal block at 0x00000297C6B87A00, 16 bytes long.
 Data: <@&#132;&#184;&#198;&#151;           > 40 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000297C6B87C80, 16 bytes long.
 Data: < &#132;&#184;&#198;&#151;           > 18 84 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000297C6B7FEE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{275} normal block at 0x00000297C6B87460, 16 bytes long.
 Data: <&#240;&#131;&#184;&#198;&#151;           > F0 83 B8 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000297C6B883F0, 992 bytes long.
 Data: <`t&#184;&#198;&#151;   &#224;&#254;&#183;&#198;&#151;   > 60 74 B8 C6 97 02 00 00 E0 FE B7 C6 97 02 00 00 
{110} normal block at 0x00000297C6B80360, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{109} normal block at 0x00000297C6B79EF0, 16 bytes long.
 Data: <&#176;&#244;&#183;&#198;&#151;           > B0 F4 B7 C6 97 02 00 00 00 00 00 00 00 00 00 00 
{108} normal block at 0x00000297C6B7F4B0, 40 bytes long.
 Data: <&#240;&#158;&#183;&#198;&#151;   ` &#184;&#198;&#151;   > F0 9E B7 C6 97 02 00 00 60 03 B8 C6 97 02 00 00 
{87} normal block at 0x00000297C6B7A210, 16 bytes long.
 Data: < &#234;*&#243;&#247;           > 80 EA 2A F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x00000297C6B799F0, 16 bytes long.
 Data: <@&#233;*&#243;&#247;           > 40 E9 2A F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x00000297C6B79630, 16 bytes long.
 Data: <&#248;W'&#243;&#247;           > F8 57 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x00000297C6B7A300, 16 bytes long.
 Data: <&#216;W'&#243;&#247;           > D8 57 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{83} normal block at 0x00000297C6B79E50, 16 bytes long.
 Data: <P '&#243;&#247;           > 50 04 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x00000297C6B7A170, 16 bytes long.
 Data: <0 '&#243;&#247;           > 30 04 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{81} normal block at 0x00000297C6B79BD0, 16 bytes long.
 Data: <&#224; '&#243;&#247;           > E0 02 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{80} normal block at 0x00000297C6B7A4E0, 16 bytes long.
 Data: <  '&#243;&#247;           > 10 04 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{79} normal block at 0x00000297C6B797C0, 16 bytes long.
 Data: <p '&#243;&#247;           > 70 04 27 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
{78} normal block at 0x00000297C6B7A0D0, 16 bytes long.
 Data: < &#192;%&#243;&#247;           > 18 C0 25 F3 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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