Task 38699028

Name test_515-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND2744_2
Workunit 31639029
Created 3 Nov 2026, 11:18:03 UTC
Sent 3 Nov 2026, 11:18:07 UTC
Report deadline 8 Nov 2026, 11:18:07 UTC
Received 3 Nov 2026, 14:32:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 629236
Run time 1 hours 22 min 47 sec
CPU time 1 hours 16 min 29 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 13,386.28 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 686.49 MB
Peak swap size 5.35 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
14:08:55 (3648): wrapper (7.9.26016): starting
14:08:55 (3648): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
14:08:57 (3648): Library/usr/bin/tar.exe exited; CPU time 0.000000
14:08:57 (3648): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
15:29:42 (3648): C:/Windows/system32/cmd.exe exited; CPU time 4589.015625
15:29:42 (3648): called boinc_finish(0)
0 bytes in 0 Free Blocks.
426 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 87131136 bytes.
Dumping objects ->
{3835279} normal block at 0x000002AA9E810BE0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835268} normal block at 0x000002AA9E811200, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835257} normal block at 0x000002AA9E8108D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835246} normal block at 0x000002AA9E811350, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835235} normal block at 0x000002AA9E8112E0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835204} normal block at 0x000002AA9E8BC9D0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835193} normal block at 0x000002AA9E962470, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835190} normal block at 0x000002AA9CD96EB0, 8 bytes long.
 Data: <  &#215;&#156;&#170;   > 00 00 D7 9C AA 02 00 00 
{3834561} normal block at 0x000002AA9E9621F0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x000002AA9CD96E60, 8 bytes long.
 Data: <&#176;Z&#132;&#158;&#170;   > B0 5A 84 9E AA 02 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000002AA9CDA2550, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002AA9CD8AC90, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000002AA9CDA4030, 16 bytes long.
 Data: <&#248;G&#218;&#156;&#170;           > F8 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002AA9CDA3860, 16 bytes long.
 Data: <&#208;G&#218;&#156;&#170;           > D0 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002AA9CD9CC90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000002AA9CDA3770, 16 bytes long.
 Data: <&#168;G&#218;&#156;&#170;           > A8 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002AA9CDA3E00, 16 bytes long.
 Data: < G&#218;&#156;&#170;           > 80 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002AA9CDA3680, 16 bytes long.
 Data: <XG&#218;&#156;&#170;           > 58 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002AA9CDA35E0, 16 bytes long.
 Data: <0G&#218;&#156;&#170;           > 30 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002AA9CD9B480, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000002AA9CDA3F90, 16 bytes long.
 Data: < ]&#216;&#156;&#170;           > 98 5D D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002AA9CD9CBD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000002AA9CDA3DB0, 16 bytes long.
 Data: <p]&#216;&#156;&#170;           > 70 5D D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002AA9CDA34A0, 16 bytes long.
 Data: <H]&#216;&#156;&#170;           > 48 5D D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002AA9CDA42B0, 16 bytes long.
 Data: < ]&#216;&#156;&#170;           > 20 5D D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002AA9CDA3D60, 16 bytes long.
 Data: <&#248;\&#216;&#156;&#170;           > F8 5C D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002AA9CDA3EA0, 16 bytes long.
 Data: <&#208;\&#216;&#156;&#170;           > D0 5C D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002AA9CDA3C20, 16 bytes long.
 Data: <&#168;\&#216;&#156;&#170;           > A8 5C D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002AA9CD9D170, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000002AA9CDA3A90, 16 bytes long.
 Data: < \&#216;&#156;&#170;           > 80 5C D8 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002AA9CD85C80, 320 bytes long.
 Data: < :&#218;&#156;&#170;   p&#209;&#217;&#156;&#170;   > 90 3A DA 9C AA 02 00 00 70 D1 D9 9C AA 02 00 00 
{271} normal block at 0x000002AA9CDA3BD0, 16 bytes long.
 Data: < G&#218;&#156;&#170;           > 10 47 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002AA9CDA3B80, 16 bytes long.
 Data: <&#232;F&#218;&#156;&#170;           > E8 46 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002AA9CD9CAB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000002AA9CDA3D10, 16 bytes long.
 Data: <&#192;F&#218;&#156;&#170;           > C0 46 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002AA9CD9C9F0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000002AA9CDA33B0, 16 bytes long.
 Data: < F&#218;&#156;&#170;           > 08 46 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002AA9CDA3400, 16 bytes long.
 Data: <&#224;E&#218;&#156;&#170;           > E0 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002AA9CDA4210, 16 bytes long.
 Data: <&#184;E&#218;&#156;&#170;           > B8 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002AA9CDA3A40, 16 bytes long.
 Data: < E&#218;&#156;&#170;           > 90 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002AA9CDA3360, 16 bytes long.
 Data: <hE&#218;&#156;&#170;           > 68 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002AA9CDA3900, 16 bytes long.
 Data: <@E&#218;&#156;&#170;           > 40 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002AA9CDA4170, 16 bytes long.
 Data: <P&#185;&#217;&#156;&#170;           > 50 B9 D9 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002AA9CD9B950, 40 bytes long.
 Data: <pA&#218;&#156;&#170;   &#208;&#201;&#139;&#158;&#170;   > 70 41 DA 9C AA 02 00 00 D0 C9 8B 9E AA 02 00 00 
{257} normal block at 0x000002AA9CDA3F40, 16 bytes long.
 Data: < E&#218;&#156;&#170;           > 20 45 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002AA9CDA3EF0, 16 bytes long.
 Data: <&#248;D&#218;&#156;&#170;           > F8 44 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002AA9CD9CF90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000002AA9CDA3C70, 16 bytes long.
 Data: <&#208;D&#218;&#156;&#170;           > D0 44 DA 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002AA9CDA44D0, 992 bytes long.
 Data: <p<&#218;&#156;&#170;    &#207;&#217;&#156;&#170;   > 70 3C DA 9C AA 02 00 00 90 CF D9 9C AA 02 00 00 
{89} normal block at 0x000002AA9CD9CF30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000002AA9CD96820, 16 bytes long.
 Data: < &#180;&#217;&#156;&#170;           > 10 B4 D9 9C AA 02 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000002AA9CD9B410, 40 bytes long.
 Data: < h&#217;&#156;&#170;   0&#207;&#217;&#156;&#170;   > 20 68 D9 9C AA 02 00 00 30 CF D9 9C AA 02 00 00 
{66} normal block at 0x000002AA9CD96730, 16 bytes long.
 Data: < &#234; &#177;&#247;           > 80 EA 9D B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002AA9CD96D70, 16 bytes long.
 Data: <@&#233; &#177;&#247;           > 40 E9 9D B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002AA9CD96870, 16 bytes long.
 Data: <&#248;W&#154;&#177;&#247;           > F8 57 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002AA9CD96CD0, 16 bytes long.
 Data: <&#216;W&#154;&#177;&#247;           > D8 57 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002AA9CD97040, 16 bytes long.
 Data: <P &#154;&#177;&#247;           > 50 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002AA9CD969B0, 16 bytes long.
 Data: <0 &#154;&#177;&#247;           > 30 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002AA9CD96C30, 16 bytes long.
 Data: <&#224; &#154;&#177;&#247;           > E0 02 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002AA9CD97360, 16 bytes long.
 Data: <  &#154;&#177;&#247;           > 10 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002AA9CD968C0, 16 bytes long.
 Data: <p &#154;&#177;&#247;           > 70 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002AA9CD974A0, 16 bytes long.
 Data: < &#192; &#177;&#247;           > 18 C0 98 B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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