Task 38698439

Name test_532-GPUGRID_TEST_ATM_40STEP_20261023-34-40-RND5048_0
Workunit 31638959
Created 2 Nov 2026, 14:19:22 UTC
Sent 2 Nov 2026, 14:19:23 UTC
Report deadline 7 Nov 2026, 14:19:23 UTC
Received 2 Nov 2026, 15:31:09 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 591223
Run time 1 hours 9 min 19 sec
CPU time 1 hours 5 min 25 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,066.02 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 678.73 MB
Peak swap size 6.76 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
09:22:54 (37280): wrapper (7.9.26016): starting
09:22:54 (37280): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
09:23:16 (37280): Library/usr/bin/tar.exe exited; CPU time 0.312500
09:23:16 (37280): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:29:56 (37280): C:/Windows/system32/cmd.exe exited; CPU time 3924.937500
10:29:56 (37280): called boinc_finish(0)
0 bytes in 0 Free Blocks.
526 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 89150979 bytes.
Dumping objects ->
{3835243} normal block at 0x00000246A29DAB30, 48 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835232} normal block at 0x00000246A29DB2A0, 48 bytes long.
 Data: <HOME=D:\ProgramD> 48 4F 4D 45 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835221} normal block at 0x00000246A29DB5B0, 48 bytes long.
 Data: <TMP=D:\ProgramDa> 54 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835210} normal block at 0x00000246A29DAF90, 48 bytes long.
 Data: <TEMP=D:\ProgramD> 54 45 4D 50 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835199} normal block at 0x00000246A29DB8C0, 48 bytes long.
 Data: <TMPDIR=D:\Progra> 54 4D 50 44 49 52 3D 44 3A 5C 50 72 6F 67 72 61 
{3835168} normal block at 0x00000246A29DA340, 64 bytes long.
 Data: <PATH=D:\ProgramD> 50 41 54 48 3D 44 3A 5C 50 72 6F 67 72 61 6D 44 
{3835157} normal block at 0x00000246A2A0D590, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835154} normal block at 0x00000246A29B0CE0, 8 bytes long.
 Data: <  &#147;&#162;F   > 00 00 93 A2 46 02 00 00 
{3834554} normal block at 0x00000246A2A0D660, 135 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x00000246A29B0F10, 8 bytes long.
 Data: < &#222; &#162;F   > 00 DE 99 A2 46 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x00000246A29A5A80, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000246A29A6A70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x00000246A29B5CB0, 16 bytes long.
 Data: < o&#155;&#162;F           > 98 6F 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000246A29B6BB0, 16 bytes long.
 Data: <po&#155;&#162;F           > 70 6F 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000246A29B1470, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x00000246A29B6B10, 16 bytes long.
 Data: <Ho&#155;&#162;F           > 48 6F 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000246A29B6840, 16 bytes long.
 Data: < o&#155;&#162;F           > 20 6F 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000246A29B6750, 16 bytes long.
 Data: <&#248;n&#155;&#162;F           > F8 6E 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000246A29B6520, 16 bytes long.
 Data: <&#208;n&#155;&#162;F           > D0 6E 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000246A29B4B60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x00000246A29B6A70, 16 bytes long.
 Data: <X&#204; &#162;F           > 58 CC 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000246A29B11D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x00000246A29B6110, 16 bytes long.
 Data: <0&#204; &#162;F           > 30 CC 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000246A29B67A0, 16 bytes long.
 Data: < &#204; &#162;F           > 08 CC 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000246A29B64D0, 16 bytes long.
 Data: <&#224;&#203; &#162;F           > E0 CB 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000246A29B5F80, 16 bytes long.
 Data: <&#184;&#203; &#162;F           > B8 CB 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000246A29B6340, 16 bytes long.
 Data: < &#203; &#162;F           > 90 CB 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000246A29B6480, 16 bytes long.
 Data: <h&#203; &#162;F           > 68 CB 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000246A29B1D70, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x00000246A29B69D0, 16 bytes long.
 Data: <@&#203; &#162;F           > 40 CB 99 A2 46 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000246A299CB40, 320 bytes long.
 Data: <&#208;i&#155;&#162;F   p &#155;&#162;F   > D0 69 9B A2 46 02 00 00 70 1D 9B A2 46 02 00 00 
{278} normal block at 0x00000246A29B6700, 16 bytes long.
 Data: <&#176;n&#155;&#162;F           > B0 6E 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000246A29B6AC0, 16 bytes long.
 Data: < n&#155;&#162;F           > 88 6E 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000246A29B1230, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x00000246A29B60C0, 16 bytes long.
 Data: <`n&#155;&#162;F           > 60 6E 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000246A29B1050, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x00000246A29B68E0, 16 bytes long.
 Data: <&#168;m&#155;&#162;F           > A8 6D 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000246A29B5EE0, 16 bytes long.
 Data: < m&#155;&#162;F           > 80 6D 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000246A29B6B60, 16 bytes long.
 Data: <Xm&#155;&#162;F           > 58 6D 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000246A29B66B0, 16 bytes long.
 Data: <0m&#155;&#162;F           > 30 6D 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000246A29B63E0, 16 bytes long.
 Data: < m&#155;&#162;F           > 08 6D 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000246A29B6890, 16 bytes long.
 Data: <&#224;l&#155;&#162;F           > E0 6C 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000246A29B61B0, 16 bytes long.
 Data: <&#160;I&#155;&#162;F           > A0 49 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000246A29B49A0, 40 bytes long.
 Data: <&#176;a&#155;&#162;F   @&#163; &#162;F   > B0 61 9B A2 46 02 00 00 40 A3 9D A2 46 02 00 00 
{264} normal block at 0x00000246A29B6C00, 16 bytes long.
 Data: <&#192;l&#155;&#162;F           > C0 6C 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000246A29B6980, 16 bytes long.
 Data: < l&#155;&#162;F           > 98 6C 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000246A29B1F50, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x00000246A29B6020, 16 bytes long.
 Data: <pl&#155;&#162;F           > 70 6C 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000246A29B6C70, 992 bytes long.
 Data: < `&#155;&#162;F   P &#155;&#162;F   > 20 60 9B A2 46 02 00 00 50 1F 9B A2 46 02 00 00 
{96} normal block at 0x00000246A29B1350, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x00000246A29B0EC0, 16 bytes long.
 Data: < J&#155;&#162;F           > 10 4A 9B A2 46 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x00000246A29B4A10, 40 bytes long.
 Data: <&#192; &#155;&#162;F   P &#155;&#162;F   > C0 0E 9B A2 46 02 00 00 50 13 9B A2 46 02 00 00 
{73} normal block at 0x00000246A29B0420, 16 bytes long.
 Data: < &#234;&#248; &#246;           > 80 EA F8 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000246A29B0E70, 16 bytes long.
 Data: <@&#233;&#248; &#246;           > 40 E9 F8 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000246A29B08D0, 16 bytes long.
 Data: <&#248;W&#245; &#246;           > F8 57 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000246A29B0790, 16 bytes long.
 Data: <&#216;W&#245; &#246;           > D8 57 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000246A29B09C0, 16 bytes long.
 Data: <P &#245; &#246;           > 50 04 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000246A29B0240, 16 bytes long.
 Data: <0 &#245; &#246;           > 30 04 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000246A29B05B0, 16 bytes long.
 Data: <&#224; &#245; &#246;           > E0 02 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000246A29B0510, 16 bytes long.
 Data: <  &#245; &#246;           > 10 04 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000246A29B0560, 16 bytes long.
 Data: <p &#245; &#246;           > 70 04 F5 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000246A29B01F0, 16 bytes long.
 Data: < &#192;&#243; &#246;           > 18 C0 F3 18 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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