Task 38696531

Name test_10-GPUGRID_TEST_ATM_40STEP_20261023-33-40-RND6290_1
Workunit 31636954
Created 1 Nov 2026, 1:08:56 UTC
Sent 1 Nov 2026, 1:09:00 UTC
Report deadline 6 Nov 2026, 1:09:00 UTC
Received 1 Nov 2026, 7:09:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 400693
Run time 1 hours 36 min 11 sec
CPU time 1 hours 27 min 44 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 4,172.19 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 657.38 MB
Peak swap size 3.70 GB
Peak disk usage 3.27 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
06:35:40 (6976): wrapper (7.9.26016): starting
06:35:40 (6976): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:35:44 (6976): Library/usr/bin/tar.exe exited; CPU time 0.000000
06:35:44 (6976): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\14\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:08:14 (6976): C:/Windows/system32/cmd.exe exited; CPU time 5264.484375
08:08:14 (6976): called boinc_finish(0)
0 bytes in 0 Free Blocks.
546 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 61804971 bytes.
Dumping objects ->
{3835132} normal block at 0x0000025C33BF1600, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835121} normal block at 0x0000025C33BF0BF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835110} normal block at 0x0000025C33BF1750, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835099} normal block at 0x0000025C33BF1360, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835088} normal block at 0x0000025C33BF12F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835057} normal block at 0x0000025C33CE4510, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835046} normal block at 0x0000025C320FCE30, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835043} normal block at 0x0000025C320A6A60, 8 bytes long.
 Data: <   2\   > 00 00 08 32 5C 02 00 00 
{3834495} normal block at 0x0000025C320FCD60, 145 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833955} normal block at 0x0000025C320A75A0, 8 bytes long.
 Data: <P"&#212;3\   > 50 22 D4 33 5C 02 00 00 
..\zip\boinc_zip.cpp(122) : {309} normal block at 0x0000025C320B1890, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000025C320AD190, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{293} normal block at 0x0000025C320B2FB0, 16 bytes long.
 Data: <&#200;> 2\           > C8 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000025C320B2C90, 16 bytes long.
 Data: <&#160;> 2\           > A0 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000025C320ABAF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{290} normal block at 0x0000025C320B2C40, 16 bytes long.
 Data: <x> 2\           > 78 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000025C320B2BF0, 16 bytes long.
 Data: <P> 2\           > 50 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000025C320B36E0, 16 bytes long.
 Data: <(> 2\           > 28 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000025C320B2A10, 16 bytes long.
 Data: < > 2\           > 00 3E 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000025C320AD630, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{285} normal block at 0x0000025C320B2DD0, 16 bytes long.
 Data: <8&#191;	2\           > 38 BF 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000025C320AC570, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{283} normal block at 0x0000025C320B35F0, 16 bytes long.
 Data: < &#191;	2\           > 10 BF 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000025C320B2BA0, 16 bytes long.
 Data: <&#232;&#190;	2\           > E8 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000025C320B3690, 16 bytes long.
 Data: <&#192;&#190;	2\           > C0 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000025C320B2D80, 16 bytes long.
 Data: < &#190;	2\           > 98 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000025C320B2B50, 16 bytes long.
 Data: <p&#190;	2\           > 70 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000025C320B3640, 16 bytes long.
 Data: <H&#190;	2\           > 48 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000025C320AB9D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{275} normal block at 0x0000025C320B33C0, 16 bytes long.
 Data: < &#190;	2\           > 20 BE 09 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000025C3209BE20, 320 bytes long.
 Data: <&#192;3 2\   &#208;&#185; 2\   > C0 33 0B 32 5C 02 00 00 D0 B9 0A 32 5C 02 00 00 
{273} normal block at 0x0000025C320B3410, 16 bytes long.
 Data: <&#224;= 2\           > E0 3D 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000025C320B3140, 16 bytes long.
 Data: <&#184;= 2\           > B8 3D 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000025C320ABA90, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{270} normal block at 0x0000025C320B2B00, 16 bytes long.
 Data: < = 2\           > 90 3D 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000025C320AB8B0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{268} normal block at 0x0000025C320B3370, 16 bytes long.
 Data: <&#216;< 2\           > D8 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000025C320B31E0, 16 bytes long.
 Data: <&#176;< 2\           > B0 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000025C320B2AB0, 16 bytes long.
 Data: < < 2\           > 88 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000025C320B35A0, 16 bytes long.
 Data: <`< 2\           > 60 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000025C320B3050, 16 bytes long.
 Data: <8< 2\           > 38 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000025C320B2920, 16 bytes long.
 Data: < < 2\           > 10 3C 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000025C320B2880, 16 bytes long.
 Data: <&#240;&#215; 2\           > F0 D7 0A 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000025C320AD7F0, 40 bytes long.
 Data: < ( 2\    E&#206;3\   > 80 28 0B 32 5C 02 00 00 10 45 CE 33 5C 02 00 00 
{259} normal block at 0x0000025C320B2830, 16 bytes long.
 Data: <&#240;; 2\           > F0 3B 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000025C320B3730, 16 bytes long.
 Data: <&#200;; 2\           > C8 3B 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000025C320ABD90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{256} normal block at 0x0000025C320B2970, 16 bytes long.
 Data: <&#160;; 2\           > A0 3B 0B 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000025C320B3BA0, 992 bytes long.
 Data: <p) 2\    &#189; 2\   > 70 29 0B 32 5C 02 00 00 90 BD 0A 32 5C 02 00 00 
{91} normal block at 0x0000025C320AC030, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{90} normal block at 0x0000025C320A74B0, 16 bytes long.
 Data: <&#192;&#213; 2\           > C0 D5 0A 32 5C 02 00 00 00 00 00 00 00 00 00 00 
{89} normal block at 0x0000025C320AD5C0, 40 bytes long.
 Data: <&#176;t 2\   0&#192; 2\   > B0 74 0A 32 5C 02 00 00 30 C0 0A 32 5C 02 00 00 
{68} normal block at 0x0000025C320A7460, 16 bytes long.
 Data: < &#234;&#166;&#178;&#247;           > 80 EA A6 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000025C320A70A0, 16 bytes long.
 Data: <@&#233;&#166;&#178;&#247;           > 40 E9 A6 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000025C320A7500, 16 bytes long.
 Data: <&#248;W&#163;&#178;&#247;           > F8 57 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000025C320A7000, 16 bytes long.
 Data: <&#216;W&#163;&#178;&#247;           > D8 57 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000025C320A70F0, 16 bytes long.
 Data: <P &#163;&#178;&#247;           > 50 04 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000025C320A7050, 16 bytes long.
 Data: <0 &#163;&#178;&#247;           > 30 04 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000025C320A6D80, 16 bytes long.
 Data: <&#224; &#163;&#178;&#247;           > E0 02 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000025C320A6A10, 16 bytes long.
 Data: <  &#163;&#178;&#247;           > 10 04 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000025C320A68D0, 16 bytes long.
 Data: <p &#163;&#178;&#247;           > 70 04 A3 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000025C320A7550, 16 bytes long.
 Data: < &#192;&#161;&#178;&#247;           > 18 C0 A1 B2 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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