Task 38696310

Name test_7-GPUGRID_TEST_ATM_40STEP_20261023-22-40-RND6747_0
Workunit 31636951
Created 31 Oct 2026, 22:00:35 UTC
Sent 31 Oct 2026, 22:00:38 UTC
Report deadline 5 Nov 2026, 22:00:38 UTC
Received 31 Oct 2026, 22:22:15 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 650764
Run time 21 min 9 sec
CPU time 19 min 1 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 30,871.08 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 725.17 MB
Peak swap size 6.92 GB
Peak disk usage 3.59 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
00:01:38 (33948): wrapper (7.9.26016): starting
00:01:38 (33948): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:01:40 (33948): Library/usr/bin/tar.exe exited; CPU time 0.000000
00:01:40 (33948): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:21:55 (33948): C:/Windows/system32/cmd.exe exited; CPU time 1141.015625
00:21:55 (33948): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 23592533 bytes.
Dumping objects ->
{3835229} normal block at 0x000001468CF94630, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x000001468CF94550, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835207} normal block at 0x000001468CF94400, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835196} normal block at 0x000001468CF94320, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835185} normal block at 0x000001468CF942B0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835154} normal block at 0x000001468EC8BBC0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835141} normal block at 0x000001468CF8EB60, 8 bytes long.
 Data: <  J F   > 00 00 4A 8D 46 01 00 00 
{3833941} normal block at 0x000001468CF8F3D0, 8 bytes long.
 Data: <0&#172;&#251;&#140;F   > 30 AC FB 8C 46 01 00 00 
..\zip\boinc_zip.cpp(122) : {302} normal block at 0x000001468CF853E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001468CF861E0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{286} normal block at 0x000001468CF94B20, 16 bytes long.
 Data: < Z&#249;&#140;F           > 98 5A F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001468CF95200, 16 bytes long.
 Data: <pZ&#249;&#140;F           > 70 5A F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001468CF92810, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{283} normal block at 0x000001468CF94D00, 16 bytes long.
 Data: <HZ&#249;&#140;F           > 48 5A F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001468CF94A30, 16 bytes long.
 Data: < Z&#249;&#140;F           > 20 5A F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001468CF948F0, 16 bytes long.
 Data: <&#248;Y&#249;&#140;F           > F8 59 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001468CF95390, 16 bytes long.
 Data: <&#208;Y&#249;&#140;F           > D0 59 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001468CF940F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{278} normal block at 0x000001468CF951B0, 16 bytes long.
 Data: <&#248;&#147;&#248;&#140;F           > F8 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001468CF92450, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{276} normal block at 0x000001468CF95610, 16 bytes long.
 Data: <&#208;&#147;&#248;&#140;F           > D0 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001468CF94C60, 16 bytes long.
 Data: <&#168;&#147;&#248;&#140;F           > A8 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001468CF94800, 16 bytes long.
 Data: < &#147;&#248;&#140;F           > 80 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001468CF949E0, 16 bytes long.
 Data: <X&#147;&#248;&#140;F           > 58 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001468CF95110, 16 bytes long.
 Data: <0&#147;&#248;&#140;F           > 30 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001468CF952A0, 16 bytes long.
 Data: < &#147;&#248;&#140;F           > 08 93 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001468CF92390, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{268} normal block at 0x000001468CF95340, 16 bytes long.
 Data: <&#224;&#146;&#248;&#140;F           > E0 92 F8 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001468CF892E0, 320 bytes long.
 Data: <@S&#249;&#140;F    #&#249;&#140;F   > 40 53 F9 8C 46 01 00 00 90 23 F9 8C 46 01 00 00 
{266} normal block at 0x000001468CF94EE0, 16 bytes long.
 Data: <&#176;Y&#249;&#140;F           > B0 59 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001468CF947B0, 16 bytes long.
 Data: < Y&#249;&#140;F           > 88 59 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001468CF927B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{263} normal block at 0x000001468CF94BC0, 16 bytes long.
 Data: <`Y&#249;&#140;F           > 60 59 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001468CF92750, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{261} normal block at 0x000001468CF95480, 16 bytes long.
 Data: <&#168;X&#249;&#140;F           > A8 58 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001468CF94A80, 16 bytes long.
 Data: < X&#249;&#140;F           > 80 58 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001468CF94FD0, 16 bytes long.
 Data: <XX&#249;&#140;F           > 58 58 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001468CF954D0, 16 bytes long.
 Data: <0X&#249;&#140;F           > 30 58 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001468CF94E40, 16 bytes long.
 Data: < X&#249;&#140;F           > 08 58 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001468CF95250, 16 bytes long.
 Data: <&#224;W&#249;&#140;F           > E0 57 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000001468CF948A0, 16 bytes long.
 Data: <&#192;E&#249;&#140;F           > C0 45 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001468CF945C0, 40 bytes long.
 Data: <&#160;H&#249;&#140;F   &#192;&#187;&#200;&#142;F   > A0 48 F9 8C 46 01 00 00 C0 BB C8 8E 46 01 00 00 
{252} normal block at 0x000001468CF955C0, 16 bytes long.
 Data: <&#192;W&#249;&#140;F           > C0 57 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x000001468CF94850, 16 bytes long.
 Data: < W&#249;&#140;F           > 98 57 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000001468CF91C70, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{249} normal block at 0x000001468CF956B0, 16 bytes long.
 Data: <pW&#249;&#140;F           > 70 57 F9 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{248} normal block at 0x000001468CF95770, 992 bytes long.
 Data: <&#176;V&#249;&#140;F   p &#249;&#140;F   > B0 56 F9 8C 46 01 00 00 70 1C F9 8C 46 01 00 00 
{84} normal block at 0x000001468CF91FD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{83} normal block at 0x000001468CF8E9D0, 16 bytes long.
 Data: <&#224;&#236;&#247;&#140;F           > E0 EC F7 8C 46 01 00 00 00 00 00 00 00 00 00 00 
{82} normal block at 0x000001468CF7ECE0, 40 bytes long.
 Data: <&#208;&#233;&#248;&#140;F   &#208; &#249;&#140;F   > D0 E9 F8 8C 46 01 00 00 D0 1F F9 8C 46 01 00 00 
{61} normal block at 0x000001468CF8F010, 16 bytes long.
 Data: < &#234;a1&#247;           > 80 EA 61 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001468CF8F560, 16 bytes long.
 Data: <@&#233;a1&#247;           > 40 E9 61 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001468CF8ECA0, 16 bytes long.
 Data: <&#248;W^1&#247;           > F8 57 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001468CF8F330, 16 bytes long.
 Data: <&#216;W^1&#247;           > D8 57 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001468CF8E980, 16 bytes long.
 Data: <P ^1&#247;           > 50 04 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001468CF8EF20, 16 bytes long.
 Data: <0 ^1&#247;           > 30 04 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001468CF8F150, 16 bytes long.
 Data: <&#224; ^1&#247;           > E0 02 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000001468CF8F510, 16 bytes long.
 Data: <  ^1&#247;           > 10 04 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000001468CF8EED0, 16 bytes long.
 Data: <p ^1&#247;           > 70 04 5E 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000001468CF8F060, 16 bytes long.
 Data: < &#192;\1&#247;           > 18 C0 5C 31 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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