Task 38689331

Name test_698-GPUGRID_TEST_ATM_40STEP_20261023-34-40-RND2961_0
Workunit 31630597
Created 28 Oct 2026, 20:16:26 UTC
Sent 28 Oct 2026, 20:16:31 UTC
Report deadline 2 Nov 2026, 20:16:31 UTC
Received 28 Oct 2026, 20:59:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648117
Run time 20 min 4 sec
CPU time 18 min 17 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 32,121.39 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 703.13 MB
Peak swap size 6.96 GB
Peak disk usage 4.09 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:39:27 (9448): wrapper (7.9.26016): starting
21:39:27 (9448): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:39:28 (9448): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:39:28 (9448): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\BOINC\data\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\BOINC\data\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:58:16 (9448): C:/Windows/system32/cmd.exe exited; CPU time 1097.515625
21:58:16 (9448): called boinc_finish(0)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27441929 bytes.
Dumping objects ->
{3835311} normal block at 0x000002659D77F700, 48 bytes long.
 Data: <PATH=E:\BOINC\da> 50 41 54 48 3D 45 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835300} normal block at 0x000002659D819730, 32 bytes long.
 Data: <HOME=E:\BOINC\da> 48 4F 4D 45 3D 45 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835289} normal block at 0x000002659D819970, 32 bytes long.
 Data: <TMP=E:\BOINC\dat> 54 4D 50 3D 45 3A 5C 42 4F 49 4E 43 5C 64 61 74 
{3835278} normal block at 0x000002659D819610, 32 bytes long.
 Data: <TEMP=E:\BOINC\da> 54 45 4D 50 3D 45 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835267} normal block at 0x000002659D8197F0, 32 bytes long.
 Data: <TMPDIR=E:\BOINC\> 54 4D 50 44 49 52 3D 45 3A 5C 42 4F 49 4E 43 5C 
{3835236} normal block at 0x000002659D77ED60, 48 bytes long.
 Data: <PATH=E:\BOINC\da> 50 41 54 48 3D 45 3A 5C 42 4F 49 4E 43 5C 64 61 
{3835225} normal block at 0x000002659D7E1230, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835222} normal block at 0x000002659BA81270, 8 bytes long.
 Data: <  &#248;&#155;e   > 00 00 F8 9B 65 02 00 00 
{3834590} normal block at 0x000002659D7E1860, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833977} normal block at 0x000002659BA80FA0, 8 bytes long.
 Data: <`\&#130;&#157;e   > 60 5C 82 9D 65 02 00 00 
..\zip\boinc_zip.cpp(122) : {320} normal block at 0x000002659BA782B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{305} normal block at 0x000002659BA79A80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{304} normal block at 0x000002659BA88970, 16 bytes long.
 Data: <X&#141;&#168;&#155;e           > 58 8D A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{303} normal block at 0x000002659BA882E0, 16 bytes long.
 Data: <0&#141;&#168;&#155;e           > 30 8D A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{302} normal block at 0x000002659BA833A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{301} normal block at 0x000002659BA88650, 16 bytes long.
 Data: < &#141;&#168;&#155;e           > 08 8D A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000002659BA88240, 16 bytes long.
 Data: <&#224;&#140;&#168;&#155;e           > E0 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x000002659BA88740, 16 bytes long.
 Data: <&#184;&#140;&#168;&#155;e           > B8 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000002659BA87C50, 16 bytes long.
 Data: < &#140;&#168;&#155;e           > 90 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000002659BA860D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{296} normal block at 0x000002659BA88600, 16 bytes long.
 Data: <X#&#167;&#155;e           > 58 23 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000002659BA832E0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{294} normal block at 0x000002659BA88880, 16 bytes long.
 Data: <0#&#167;&#155;e           > 30 23 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002659BA886F0, 16 bytes long.
 Data: < #&#167;&#155;e           > 08 23 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002659BA87D90, 16 bytes long.
 Data: <&#224;"&#167;&#155;e           > E0 22 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002659BA87BB0, 16 bytes long.
 Data: <&#184;"&#167;&#155;e           > B8 22 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002659BA87C00, 16 bytes long.
 Data: < "&#167;&#155;e           > 90 22 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002659BA87CA0, 16 bytes long.
 Data: <h"&#167;&#155;e           > 68 22 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002659BA82B00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{286} normal block at 0x000002659BA88420, 16 bytes long.
 Data: <@"&#167;&#155;e           > 40 22 A7 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002659BA72240, 320 bytes long.
 Data: < &#132;&#168;&#155;e    +&#168;&#155;e   > 20 84 A8 9B 65 02 00 00 00 2B A8 9B 65 02 00 00 
{284} normal block at 0x000002659BA886A0, 16 bytes long.
 Data: <p&#140;&#168;&#155;e           > 70 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002659BA88560, 16 bytes long.
 Data: <H&#140;&#168;&#155;e           > 48 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002659BA82860, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{281} normal block at 0x000002659BA88060, 16 bytes long.
 Data: < &#140;&#168;&#155;e           > 20 8C A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002659BA829E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{279} normal block at 0x000002659BA87E30, 16 bytes long.
 Data: <h&#139;&#168;&#155;e           > 68 8B A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002659BA87F20, 16 bytes long.
 Data: <@&#139;&#168;&#155;e           > 40 8B A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002659BA881F0, 16 bytes long.
 Data: < &#139;&#168;&#155;e           > 18 8B A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002659BA87E80, 16 bytes long.
 Data: <&#240;&#138;&#168;&#155;e           > F0 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002659BA887E0, 16 bytes long.
 Data: <&#200;&#138;&#168;&#155;e           > C8 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002659BA885B0, 16 bytes long.
 Data: <&#160;&#138;&#168;&#155;e           > A0 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002659BA87B60, 16 bytes long.
 Data: < f&#168;&#155;e           > 80 66 A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002659BA86680, 40 bytes long.
 Data: <`{&#168;&#155;e   `&#237;w&#157;e   > 60 7B A8 9B 65 02 00 00 60 ED 77 9D 65 02 00 00 
{270} normal block at 0x000002659BA88830, 16 bytes long.
 Data: < &#138;&#168;&#155;e           > 80 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002659BA88010, 16 bytes long.
 Data: <X&#138;&#168;&#155;e           > 58 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002659BA82FE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{267} normal block at 0x000002659BA881A0, 16 bytes long.
 Data: <0&#138;&#168;&#155;e           > 30 8A A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002659BA88A30, 992 bytes long.
 Data: <&#160; &#168;&#155;e   &#224;/&#168;&#155;e   > A0 81 A8 9B 65 02 00 00 E0 2F A8 9B 65 02 00 00 
{102} normal block at 0x000002659BA82DA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{101} normal block at 0x000002659BA80960, 16 bytes long.
 Data: <``&#168;&#155;e           > 60 60 A8 9B 65 02 00 00 00 00 00 00 00 00 00 00 
{100} normal block at 0x000002659BA86060, 40 bytes long.
 Data: <`	&#168;&#155;e   &#160;-&#168;&#155;e   > 60 09 A8 9B 65 02 00 00 A0 2D A8 9B 65 02 00 00 
{79} normal block at 0x000002659BA808C0, 16 bytes long.
 Data: < &#234;>}&#246;           > 80 EA 3E 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{78} normal block at 0x000002659BA80690, 16 bytes long.
 Data: <@&#233;>}&#246;           > 40 E9 3E 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{77} normal block at 0x000002659BA81130, 16 bytes long.
 Data: <&#248;W;}&#246;           > F8 57 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{76} normal block at 0x000002659BA80A50, 16 bytes long.
 Data: <&#216;W;}&#246;           > D8 57 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{75} normal block at 0x000002659BA80780, 16 bytes long.
 Data: <P ;}&#246;           > 50 04 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000002659BA80B90, 16 bytes long.
 Data: <0 ;}&#246;           > 30 04 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000002659BA80870, 16 bytes long.
 Data: <&#224; ;}&#246;           > E0 02 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002659BA81400, 16 bytes long.
 Data: <  ;}&#246;           > 10 04 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002659BA80B40, 16 bytes long.
 Data: <p ;}&#246;           > 70 04 3B 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002659BA80D20, 16 bytes long.
 Data: < &#192;9}&#246;           > 18 C0 39 7D F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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