Task 38689305

Name test_482-GPUGRID_TEST_ATM_40STEP_20261023-38-40-RND9971_0
Workunit 31630573
Created 28 Oct 2026, 20:02:46 UTC
Sent 28 Oct 2026, 20:02:49 UTC
Report deadline 2 Nov 2026, 20:02:49 UTC
Received 28 Oct 2026, 20:58:50 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 613730
Run time 30 min 23 sec
CPU time 22 min 54 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 58,709.55 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 743.50 MB
Peak swap size 10.03 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:28:18 (32676): wrapper (7.9.26016): starting
21:28:18 (32676): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:28:19 (32676): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:28:19 (32676): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:57:41 (32676): C:/Windows/system32/cmd.exe exited; CPU time 1374.453125
21:57:41 (32676): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36691691 bytes.
Dumping objects ->
{3835716} normal block at 0x000001A33EDAC080, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835705} normal block at 0x000001A33EDABD00, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835694} normal block at 0x000001A33EDAC010, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835683} normal block at 0x000001A33EDAB590, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835672} normal block at 0x000001A33EDAC400, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835641} normal block at 0x000001A340AB84B0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835628} normal block at 0x000001A33ED80220, 8 bytes long.
 Data: <  &#211;>&#163;   > 00 00 D3 3E A3 01 00 00 
{3833972} normal block at 0x000001A33ED807C0, 8 bytes long.
 Data: <&#240;e&#177;@&#163;   > F0 65 B1 40 A3 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001A33ED7AFF0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001A33ED75610, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001A33ED88FC0, 16 bytes long.
 Data: <X&#147;&#216;>&#163;           > 58 93 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001A33ED88840, 16 bytes long.
 Data: <0&#147;&#216;>&#163;           > 30 93 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001A33ED820F0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001A33ED88C00, 16 bytes long.
 Data: < &#147;&#216;>&#163;           > 08 93 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001A33ED887F0, 16 bytes long.
 Data: <&#224;&#146;&#216;>&#163;           > E0 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001A33ED886B0, 16 bytes long.
 Data: <&#184;&#146;&#216;>&#163;           > B8 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001A33ED88660, 16 bytes long.
 Data: < &#146;&#216;>&#163;           > 90 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001A33ED83F30, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001A33ED88A20, 16 bytes long.
 Data: <X&#227;&#214;>&#163;           > 58 E3 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001A33ED82630, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001A33ED88200, 16 bytes long.
 Data: <0&#227;&#214;>&#163;           > 30 E3 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001A33ED88610, 16 bytes long.
 Data: < &#227;&#214;>&#163;           > 08 E3 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001A33ED881B0, 16 bytes long.
 Data: <&#224;&#226;&#214;>&#163;           > E0 E2 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001A33ED88CA0, 16 bytes long.
 Data: <&#184;&#226;&#214;>&#163;           > B8 E2 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001A33ED88ED0, 16 bytes long.
 Data: < &#226;&#214;>&#163;           > 90 E2 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001A33ED885C0, 16 bytes long.
 Data: <h&#226;&#214;>&#163;           > 68 E2 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001A33ED81D90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001A33ED88160, 16 bytes long.
 Data: <@&#226;&#214;>&#163;           > 40 E2 D6 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001A33ED6E240, 320 bytes long.
 Data: <` &#216;>&#163;     &#216;>&#163;   > 60 81 D8 3E A3 01 00 00 90 1D D8 3E A3 01 00 00 
{279} normal block at 0x000001A33ED88110, 16 bytes long.
 Data: <p&#146;&#216;>&#163;           > 70 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001A33ED88520, 16 bytes long.
 Data: <H&#146;&#216;>&#163;           > 48 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001A33ED82150, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001A33ED88BB0, 16 bytes long.
 Data: < &#146;&#216;>&#163;           > 20 92 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001A33ED81EB0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001A33ED88750, 16 bytes long.
 Data: <h&#145;&#216;>&#163;           > 68 91 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001A33ED883E0, 16 bytes long.
 Data: <@&#145;&#216;>&#163;           > 40 91 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001A33ED888E0, 16 bytes long.
 Data: < &#145;&#216;>&#163;           > 18 91 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001A33ED88570, 16 bytes long.
 Data: <&#240; &#216;>&#163;           > F0 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001A33ED88E80, 16 bytes long.
 Data: <&#200; &#216;>&#163;           > C8 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001A33ED88F70, 16 bytes long.
 Data: <&#160; &#216;>&#163;           > A0 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001A33ED887A0, 16 bytes long.
 Data: < <&#216;>&#163;           > 20 3C D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001A33ED83C20, 40 bytes long.
 Data: <&#160;&#135;&#216;>&#163;   &#176;&#132;&#171;@&#163;   > A0 87 D8 3E A3 01 00 00 B0 84 AB 40 A3 01 00 00 
{265} normal block at 0x000001A33ED88CF0, 16 bytes long.
 Data: <  &#216;>&#163;           > 80 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001A33ED884D0, 16 bytes long.
 Data: <X &#216;>&#163;           > 58 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001A33ED825D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001A33ED88390, 16 bytes long.
 Data: <0 &#216;>&#163;           > 30 90 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001A33ED89030, 992 bytes long.
 Data: <  &#216;>&#163;   &#208;%&#216;>&#163;   > 90 83 D8 3E A3 01 00 00 D0 25 D8 3E A3 01 00 00 
{97} normal block at 0x000001A33ED81FD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001A33ED801D0, 16 bytes long.
 Data: < @&#216;>&#163;           > 10 40 D8 3E A3 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001A33ED84010, 40 bytes long.
 Data: <&#208; &#216;>&#163;   &#208; &#216;>&#163;   > D0 01 D8 3E A3 01 00 00 D0 1F D8 3E A3 01 00 00 
{74} normal block at 0x000001A33ED7FEB0, 16 bytes long.
 Data: < &#234;2 &#247;           > 80 EA 32 BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001A33ED80770, 16 bytes long.
 Data: <@&#233;2 &#247;           > 40 E9 32 BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001A33ED7FFF0, 16 bytes long.
 Data: <&#248;W/ &#247;           > F8 57 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001A33ED80630, 16 bytes long.
 Data: <&#216;W/ &#247;           > D8 57 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001A33ED805E0, 16 bytes long.
 Data: <P / &#247;           > 50 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001A33ED7FFA0, 16 bytes long.
 Data: <0 / &#247;           > 30 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001A33ED7FF50, 16 bytes long.
 Data: <&#224; / &#247;           > E0 02 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001A33ED80C70, 16 bytes long.
 Data: <  / &#247;           > 10 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001A33ED80450, 16 bytes long.
 Data: <p / &#247;           > 70 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001A33ED80590, 16 bytes long.
 Data: < &#192;- &#247;           > 18 C0 2D BD F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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