Task 38689250

Name test_6-GPUGRID_TEST_ATM_40STEP_20261023-28-40-RND2363_0
Workunit 31630519
Created 28 Oct 2026, 19:30:58 UTC
Sent 28 Oct 2026, 19:31:04 UTC
Report deadline 2 Nov 2026, 19:31:04 UTC
Received 28 Oct 2026, 20:28:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 613730
Run time 29 min 54 sec
CPU time 23 min 21 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 58,709.55 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.37 MB
Peak swap size 10.02 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
20:58:25 (35372): wrapper (7.9.26016): starting
20:58:25 (35372): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:58:27 (35372): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:58:27 (35372): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:27:08 (35372): C:/Windows/system32/cmd.exe exited; CPU time 1401.671875
21:27:08 (35372): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36118091 bytes.
Dumping objects ->
{3835716} normal block at 0x000001C23439C400, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835705} normal block at 0x000001C23439C240, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835694} normal block at 0x000001C23439C390, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835683} normal block at 0x000001C23439B980, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835672} normal block at 0x000001C23439BFA0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835641} normal block at 0x000001C2361C8730, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835628} normal block at 0x000001C23436FDC0, 8 bytes long.
 Data: <   4&#194;   > 00 00 88 34 C2 01 00 00 
{3833972} normal block at 0x000001C234370A90, 8 bytes long.
 Data: <&#240;e"6&#194;   > F0 65 22 36 C2 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001C23436B4F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001C234364AD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001C234378B60, 16 bytes long.
 Data: <X&#147;74&#194;           > 58 93 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001C2343780C0, 16 bytes long.
 Data: <0&#147;74&#194;           > 30 93 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001C234371DF0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001C234378570, 16 bytes long.
 Data: < &#147;74&#194;           > 08 93 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001C234378DE0, 16 bytes long.
 Data: <&#224;&#146;74&#194;           > E0 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001C234378B10, 16 bytes long.
 Data: <&#184;&#146;74&#194;           > B8 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001C234378480, 16 bytes long.
 Data: < &#146;74&#194;           > 90 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001C234373FA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001C234378070, 16 bytes long.
 Data: <X&#227;54&#194;           > 58 E3 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001C234372630, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001C234378AC0, 16 bytes long.
 Data: <0&#227;54&#194;           > 30 E3 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001C2343786B0, 16 bytes long.
 Data: < &#227;54&#194;           > 08 E3 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001C234378C50, 16 bytes long.
 Data: <&#224;&#226;54&#194;           > E0 E2 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001C234378840, 16 bytes long.
 Data: <&#184;&#226;54&#194;           > B8 E2 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001C2343783E0, 16 bytes long.
 Data: < &#226;54&#194;           > 90 E2 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001C234378A70, 16 bytes long.
 Data: <h&#226;54&#194;           > 68 E2 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001C234371FD0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001C234378340, 16 bytes long.
 Data: <@&#226;54&#194;           > 40 E2 35 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001C23435E240, 320 bytes long.
 Data: <@ 74&#194;   &#208; 74&#194;   > 40 83 37 34 C2 01 00 00 D0 1F 37 34 C2 01 00 00 
{279} normal block at 0x000001C2343782F0, 16 bytes long.
 Data: <p&#146;74&#194;           > 70 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001C234378430, 16 bytes long.
 Data: <H&#146;74&#194;           > 48 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001C234372510, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001C234378A20, 16 bytes long.
 Data: < &#146;74&#194;           > 20 92 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001C234372A50, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001C234378980, 16 bytes long.
 Data: <h&#145;74&#194;           > 68 91 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001C234378CF0, 16 bytes long.
 Data: <@&#145;74&#194;           > 40 91 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001C234378520, 16 bytes long.
 Data: < &#145;74&#194;           > 18 91 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001C2343788E0, 16 bytes long.
 Data: <&#240; 74&#194;           > F0 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001C2343787A0, 16 bytes long.
 Data: <&#200; 74&#194;           > C8 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001C234378930, 16 bytes long.
 Data: <&#160; 74&#194;           > A0 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001C234378890, 16 bytes long.
 Data: <@;74&#194;           > 40 3B 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001C234373B40, 40 bytes long.
 Data: <  74&#194;   0&#135; 6&#194;   > 90 88 37 34 C2 01 00 00 30 87 1C 36 C2 01 00 00 
{265} normal block at 0x000001C234378F70, 16 bytes long.
 Data: <  74&#194;           > 80 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001C2343789D0, 16 bytes long.
 Data: <X 74&#194;           > 58 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001C2343728D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001C234378700, 16 bytes long.
 Data: <0 74&#194;           > 30 90 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001C234379030, 992 bytes long.
 Data: < &#135;74&#194;   &#208;(74&#194;   > 00 87 37 34 C2 01 00 00 D0 28 37 34 C2 01 00 00 
{97} normal block at 0x000001C2343727B0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001C23436FE10, 16 bytes long.
 Data: <`:74&#194;           > 60 3A 37 34 C2 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001C234373A60, 40 bytes long.
 Data: < &#254;64&#194;   &#176;'74&#194;   > 10 FE 36 34 C2 01 00 00 B0 27 37 34 C2 01 00 00 
{74} normal block at 0x000001C23436FE60, 16 bytes long.
 Data: < &#234;2 &#247;           > 80 EA 32 BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001C23436FFA0, 16 bytes long.
 Data: <@&#233;2 &#247;           > 40 E9 32 BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001C23436FF50, 16 bytes long.
 Data: <&#248;W/ &#247;           > F8 57 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001C234370400, 16 bytes long.
 Data: <&#216;W/ &#247;           > D8 57 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001C2343705E0, 16 bytes long.
 Data: <P / &#247;           > 50 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001C234370C70, 16 bytes long.
 Data: <0 / &#247;           > 30 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001C2343709F0, 16 bytes long.
 Data: <&#224; / &#247;           > E0 02 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001C234370220, 16 bytes long.
 Data: <  / &#247;           > 10 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001C234370270, 16 bytes long.
 Data: <p / &#247;           > 70 04 2F BD F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001C234370B30, 16 bytes long.
 Data: < &#192;- &#247;           > 18 C0 2D BD F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra