Task 38689228

Name test_482-GPUGRID_TEST_ATM_40STEP_20261023-37-40-RND9971_0
Workunit 31630497
Created 28 Oct 2026, 19:21:00 UTC
Sent 28 Oct 2026, 19:21:03 UTC
Report deadline 2 Nov 2026, 19:21:03 UTC
Received 28 Oct 2026, 20:02:27 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 644191
Run time 37 min 52 sec
CPU time 35 min 36 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 5,717.53 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 659.37 MB
Peak swap size 3.70 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
20:25:20 (24740): wrapper (7.9.26016): starting
20:25:20 (24740): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:25:21 (24740): Library/usr/bin/tar.exe exited; CPU time 0.000000
20:25:21 (24740): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
21:02:04 (24740): C:/Windows/system32/cmd.exe exited; CPU time 2136.343750
21:02:04 (24740): called boinc_finish(0)
0 bytes in 0 Free Blocks.
726 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 32182261 bytes.
Dumping objects ->
{3835287} normal block at 0x0000021B5A794FE0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835276} normal block at 0x0000021B5A794E20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835265} normal block at 0x0000021B5A794DB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835254} normal block at 0x0000021B5A7953D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835243} normal block at 0x0000021B5A795360, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835212} normal block at 0x0000021B5C2D8A10, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835201} normal block at 0x0000021B5A77DC30, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835198} normal block at 0x0000021B5A78DBC0, 8 bytes long.
 Data: <  &#193;Z    > 00 00 C1 5A 1B 02 00 00 
{3834575} normal block at 0x0000021B5A77DD60, 235 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x0000021B5A78DB70, 8 bytes long.
 Data: <&#160;K3\    > A0 4B 33 5C 1B 02 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x0000021B5A791870, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000021B5A786210, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x0000021B5A7968C0, 16 bytes long.
 Data: <&#168;lyZ            > A8 6C 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000021B5A795C90, 16 bytes long.
 Data: < lyZ            > 80 6C 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000021B5A78F4A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x0000021B5A7967D0, 16 bytes long.
 Data: <XlyZ            > 58 6C 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000021B5A796780, 16 bytes long.
 Data: <0lyZ            > 30 6C 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000021B5A796190, 16 bytes long.
 Data: < lyZ            > 08 6C 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000021B5A796730, 16 bytes long.
 Data: <&#224;kyZ            > E0 6B 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000021B5A7952F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x0000021B5A7965F0, 16 bytes long.
 Data: <&#232;&#241;wZ            > E8 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000021B5A78F680, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x0000021B5A7960A0, 16 bytes long.
 Data: <&#192;&#241;wZ            > C0 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000021B5A7964B0, 16 bytes long.
 Data: < &#241;wZ            > 98 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000021B5A7966E0, 16 bytes long.
 Data: <p&#241;wZ            > 70 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000021B5A795E70, 16 bytes long.
 Data: <H&#241;wZ            > 48 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000021B5A796820, 16 bytes long.
 Data: < &#241;wZ            > 20 F1 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000021B5A796640, 16 bytes long.
 Data: <&#248;&#240;wZ            > F8 F0 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000021B5A78F620, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x0000021B5A795D80, 16 bytes long.
 Data: <&#208;&#240;wZ            > D0 F0 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000021B5A77F0D0, 320 bytes long.
 Data: < ]yZ     &#246;xZ    > 80 5D 79 5A 1B 02 00 00 20 F6 78 5A 1B 02 00 00 
{269} normal block at 0x0000021B5A795B50, 16 bytes long.
 Data: <&#192;kyZ            > C0 6B 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000021B5A796230, 16 bytes long.
 Data: < kyZ            > 98 6B 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000021B5A78FC80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x0000021B5A795C40, 16 bytes long.
 Data: <pkyZ            > 70 6B 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000021B5A790040, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x0000021B5A796550, 16 bytes long.
 Data: <&#184;jyZ            > B8 6A 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000021B5A796050, 16 bytes long.
 Data: < jyZ            > 90 6A 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000021B5A795A10, 16 bytes long.
 Data: <hjyZ            > 68 6A 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000021B5A795D30, 16 bytes long.
 Data: <@jyZ            > 40 6A 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000021B5A7959C0, 16 bytes long.
 Data: < jyZ            > 18 6A 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000021B5A796000, 16 bytes long.
 Data: <&#240;iyZ            > F0 69 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000021B5A796140, 16 bytes long.
 Data: <&#176;TyZ            > B0 54 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000021B5A7954B0, 40 bytes long.
 Data: <@ayZ     &#138;-\    > 40 61 79 5A 1B 02 00 00 10 8A 2D 5C 1B 02 00 00 
{255} normal block at 0x0000021B5A7960F0, 16 bytes long.
 Data: <&#208;iyZ            > D0 69 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000021B5A795F10, 16 bytes long.
 Data: <&#168;iyZ            > A8 69 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000021B5A78FCE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x0000021B5A795EC0, 16 bytes long.
 Data: < iyZ            > 80 69 79 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x0000021B5A796980, 992 bytes long.
 Data: <&#192;^yZ    &#224;&#252;xZ    > C0 5E 79 5A 1B 02 00 00 E0 FC 78 5A 1B 02 00 00 
{87} normal block at 0x0000021B5A78FC20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x0000021B5A78D8A0, 16 bytes long.
 Data: < &#215;wZ            > 00 D7 77 5A 1B 02 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x0000021B5A77D700, 40 bytes long.
 Data: <&#160;&#216;xZ     &#252;xZ    > A0 D8 78 5A 1B 02 00 00 20 FC 78 5A 1B 02 00 00 
{64} normal block at 0x0000021B5A78D760, 16 bytes long.
 Data: < &#234;&#202;&#215;&#246;           > 80 EA CA D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000021B5A78DE90, 16 bytes long.
 Data: <@&#233;&#202;&#215;&#246;           > 40 E9 CA D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000021B5A78D620, 16 bytes long.
 Data: <&#248;W&#199;&#215;&#246;           > F8 57 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000021B5A78DB20, 16 bytes long.
 Data: <&#216;W&#199;&#215;&#246;           > D8 57 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000021B5A78D800, 16 bytes long.
 Data: <P &#199;&#215;&#246;           > 50 04 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000021B5A78DAD0, 16 bytes long.
 Data: <0 &#199;&#215;&#246;           > 30 04 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000021B5A78DDF0, 16 bytes long.
 Data: <&#224; &#199;&#215;&#246;           > E0 02 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000021B5A78E340, 16 bytes long.
 Data: <  &#199;&#215;&#246;           > 10 04 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000021B5A78D8F0, 16 bytes long.
 Data: <p &#199;&#215;&#246;           > 70 04 C7 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000021B5A78E3E0, 16 bytes long.
 Data: < &#192;&#197;&#215;&#246;           > 18 C0 C5 D7 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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