Task 38689169

Name test_721-GPUGRID_TEST_ATM_40STEP_20261023-35-40-RND5509_2
Workunit 31630146
Created 28 Oct 2026, 18:55:42 UTC
Sent 28 Oct 2026, 18:55:48 UTC
Report deadline 2 Nov 2026, 18:55:48 UTC
Received 28 Oct 2026, 19:24:51 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 641444
Run time 28 min 32 sec
CPU time 24 min 48 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 29,502.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 730.29 MB
Peak swap size 5.43 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:57:11 (34748): wrapper (7.9.26016): starting
19:57:11 (34748): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:57:15 (34748): Library/usr/bin/tar.exe exited; CPU time 0.031250
19:57:15 (34748): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\Boinc\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\Boinc\slots\7\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
20:24:27 (34748): C:/Windows/system32/cmd.exe exited; CPU time 1488.828125
20:24:27 (34748): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 33554253 bytes.
Dumping objects ->
{3835502} normal block at 0x00000188B1008A60, 48 bytes long.
 Data: <PATH=D:\Boinc\sl> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5C 73 6C 
{3835491} normal block at 0x00000188B2D11210, 32 bytes long.
 Data: <HOME=D:\Boinc\sl> 48 4F 4D 45 3D 44 3A 5C 42 6F 69 6E 63 5C 73 6C 
{3835480} normal block at 0x00000188B2D117B0, 32 bytes long.
 Data: <TMP=D:\Boinc\slo> 54 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5C 73 6C 6F 
{3835469} normal block at 0x00000188B2D11630, 32 bytes long.
 Data: <TEMP=D:\Boinc\sl> 54 45 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5C 73 6C 
{3835458} normal block at 0x00000188B2D10850, 32 bytes long.
 Data: <TMPDIR=D:\Boinc\> 54 4D 50 44 49 52 3D 44 3A 5C 42 6F 69 6E 63 5C 
{3835427} normal block at 0x00000188B1008DE0, 48 bytes long.
 Data: <PATH=D:\Boinc\sl> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5C 73 6C 
..\api\boinc_api.cpp(309) : {3835414} normal block at 0x00000188B0FDCBD0, 8 bytes long.
 Data: <  ^&#177;    > 00 00 5E B1 88 01 00 00 
{3833969} normal block at 0x00000188B0FDD2B0, 8 bytes long.
 Data: <`&#227;&#189;&#178;    > 60 E3 BD B2 88 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x00000188B0FE1D20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x00000188B0FD5950, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x00000188B0FE51E0, 16 bytes long.
 Data: <&#232;b&#254;&#176;            > E8 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000188B0FE50F0, 16 bytes long.
 Data: <&#192;b&#254;&#176;            > C0 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000188B0FDF220, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x00000188B0FE5190, 16 bytes long.
 Data: < b&#254;&#176;            > 98 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000188B0FE5780, 16 bytes long.
 Data: <pb&#254;&#176;            > 70 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000188B0FE5B40, 16 bytes long.
 Data: <Hb&#254;&#176;            > 48 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000188B0FE5050, 16 bytes long.
 Data: < b&#254;&#176;            > 20 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000188B0FDF8B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x00000188B0FE5F50, 16 bytes long.
 Data: <(&#246;&#252;&#176;            > 28 F6 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000188B0FDF100, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x00000188B0FE5690, 16 bytes long.
 Data: < &#246;&#252;&#176;            > 00 F6 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000188B0FE52D0, 16 bytes long.
 Data: <&#216;&#245;&#252;&#176;            > D8 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000188B0FE5F00, 16 bytes long.
 Data: <&#176;&#245;&#252;&#176;            > B0 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000188B0FE5C80, 16 bytes long.
 Data: < &#245;&#252;&#176;            > 88 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000188B0FE5EB0, 16 bytes long.
 Data: <`&#245;&#252;&#176;            > 60 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000188B0FE5730, 16 bytes long.
 Data: <8&#245;&#252;&#176;            > 38 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000188B0FDEE00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x00000188B0FE5E60, 16 bytes long.
 Data: < &#245;&#252;&#176;            > 10 F5 FC B0 88 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000188B0FCF510, 320 bytes long.
 Data: <`^&#254;&#176;     &#238;&#253;&#176;    > 60 5E FE B0 88 01 00 00 00 EE FD B0 88 01 00 00 
{280} normal block at 0x00000188B0FE5320, 16 bytes long.
 Data: < b&#254;&#176;            > 00 62 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000188B0FE5AF0, 16 bytes long.
 Data: <&#216;a&#254;&#176;            > D8 61 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000188B0FDF340, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x00000188B0FE5E10, 16 bytes long.
 Data: <&#176;a&#254;&#176;            > B0 61 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000188B0FDE5C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x00000188B0FE5AA0, 16 bytes long.
 Data: <&#248;`&#254;&#176;            > F8 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000188B0FE5D20, 16 bytes long.
 Data: <&#208;`&#254;&#176;            > D0 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000188B0FE5280, 16 bytes long.
 Data: <&#168;`&#254;&#176;            > A8 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000188B0FE5550, 16 bytes long.
 Data: < `&#254;&#176;            > 80 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000188B0FE5140, 16 bytes long.
 Data: <X`&#254;&#176;            > 58 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000188B0FE58C0, 16 bytes long.
 Data: <0`&#254;&#176;            > 30 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000188B0FE5370, 16 bytes long.
 Data: <@&#248;&#253;&#176;            > 40 F8 FD B0 88 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000188B0FDF840, 40 bytes long.
 Data: <pS&#254;&#176;    &#224;  &#177;    > 70 53 FE B0 88 01 00 00 E0 8D 00 B1 88 01 00 00 
{266} normal block at 0x00000188B0FE5DC0, 16 bytes long.
 Data: < `&#254;&#176;            > 10 60 FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000188B0FE5000, 16 bytes long.
 Data: <&#232;_&#254;&#176;            > E8 5F FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000188B0FDE8C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x00000188B0FE5CD0, 16 bytes long.
 Data: <&#192;_&#254;&#176;            > C0 5F FE B0 88 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000188B0FE5FC0, 992 bytes long.
 Data: <&#208;\&#254;&#176;    &#192;&#232;&#253;&#176;    > D0 5C FE B0 88 01 00 00 C0 E8 FD B0 88 01 00 00 
{98} normal block at 0x00000188B0FDEBC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x00000188B0FDCB80, 16 bytes long.
 Data: <&#224;&#250;&#253;&#176;            > E0 FA FD B0 88 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x00000188B0FDFAE0, 40 bytes long.
 Data: < &#203;&#253;&#176;    &#192;&#235;&#253;&#176;    > 80 CB FD B0 88 01 00 00 C0 EB FD B0 88 01 00 00 
{75} normal block at 0x00000188B0FDD850, 16 bytes long.
 Data: < &#234;&#226;&#149;&#247;           > 80 EA E2 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x00000188B0FDD530, 16 bytes long.
 Data: <@&#233;&#226;&#149;&#247;           > 40 E9 E2 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x00000188B0FDD0D0, 16 bytes long.
 Data: <&#248;W&#223;&#149;&#247;           > F8 57 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000188B0FDD4E0, 16 bytes long.
 Data: <&#216;W&#223;&#149;&#247;           > D8 57 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000188B0FDCD60, 16 bytes long.
 Data: <P &#223;&#149;&#247;           > 50 04 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000188B0FDD800, 16 bytes long.
 Data: <0 &#223;&#149;&#247;           > 30 04 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000188B0FDD6C0, 16 bytes long.
 Data: <&#224; &#223;&#149;&#247;           > E0 02 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000188B0FDD7B0, 16 bytes long.
 Data: <  &#223;&#149;&#247;           > 10 04 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000188B0FDD1C0, 16 bytes long.
 Data: <p &#223;&#149;&#247;           > 70 04 DF 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000188B0FDD490, 16 bytes long.
 Data: < &#192;&#221;&#149;&#247;           > 18 C0 DD 95 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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