Task 38689134

Name test_363-GPUGRID_TEST_ATM_40STEP_20261023-39-40-RND1539_0
Workunit 31630409
Created 28 Oct 2026, 18:37:34 UTC
Sent 28 Oct 2026, 18:37:42 UTC
Report deadline 2 Nov 2026, 18:37:42 UTC
Received 28 Oct 2026, 19:07:47 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648831
Run time 27 min 46 sec
CPU time 24 min 56 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 83,070.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 737.08 MB
Peak swap size 13.15 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
03:32:27 (28104): wrapper (7.9.26016): starting
03:32:27 (28104): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
03:32:29 (28104): Library/usr/bin/tar.exe exited; CPU time 0.000000
03:32:29 (28104): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
03:58:33 (28104): C:/Windows/system32/cmd.exe exited; CPU time 1496.062500
03:58:33 (28104): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27997375 bytes.
Dumping objects ->
{3835370} normal block at 0x000001E6B9D1D950, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835359} normal block at 0x000001E6B9D1E2F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835348} normal block at 0x000001E6B9D1D4F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835337} normal block at 0x000001E6B9D1E3D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835326} normal block at 0x000001E6B9D1DD40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835295} normal block at 0x000001E6BBEDCE50, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835284} normal block at 0x000001E6BBEF2A00, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835281} normal block at 0x000001E6B9CEE3F0, 8 bytes long.
 Data: <   &#186;    > 00 00 03 BA E6 01 00 00 
{3834663} normal block at 0x000001E6BBEF2950, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834061} normal block at 0x000001E6B9CEE440, 8 bytes long.
 Data: <`&#219;&#205;&#185;    > 60 DB CD B9 E6 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001E6B9CE92B0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001E6B9CE1C10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001E6B9CFA570, 16 bytes long.
 Data: <(&#179;&#207;&#185;            > 28 B3 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001E6B9CFA8E0, 16 bytes long.
 Data: < &#179;&#207;&#185;            > 00 B3 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001E6B9CF5850, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001E6B9CFA520, 16 bytes long.
 Data: <&#216;&#178;&#207;&#185;            > D8 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001E6B9CFA020, 16 bytes long.
 Data: <&#176;&#178;&#207;&#185;            > B0 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001E6B9CFA4D0, 16 bytes long.
 Data: < &#178;&#207;&#185;            > 88 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001E6B9CF9F30, 16 bytes long.
 Data: <`&#178;&#207;&#185;            > 60 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001E6B9CF4540, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001E6B9CFA2F0, 16 bytes long.
 Data: <( &#207;&#185;            > 28 9D CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001E6B9CF62D0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001E6B9CFAB60, 16 bytes long.
 Data: <  &#207;&#185;            > 00 9D CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001E6B9CFA0C0, 16 bytes long.
 Data: <&#216; &#207;&#185;            > D8 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001E6B9CFA840, 16 bytes long.
 Data: <&#176; &#207;&#185;            > B0 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E6B9CF9EE0, 16 bytes long.
 Data: <  &#207;&#185;            > 88 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E6B9CFAB10, 16 bytes long.
 Data: <` &#207;&#185;            > 60 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001E6B9CFA890, 16 bytes long.
 Data: <8 &#207;&#185;            > 38 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001E6B9CF6330, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001E6B9CFA480, 16 bytes long.
 Data: <  &#207;&#185;            > 10 9C CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001E6B9CF9C10, 320 bytes long.
 Data: < &#164;&#207;&#185;    0c&#207;&#185;    > 80 A4 CF B9 E6 01 00 00 30 63 CF B9 E6 01 00 00 
{277} normal block at 0x000001E6B9CFA1B0, 16 bytes long.
 Data: <@&#178;&#207;&#185;            > 40 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001E6B9CF9E90, 16 bytes long.
 Data: < &#178;&#207;&#185;            > 18 B2 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E6B9CF5910, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001E6B9CFA430, 16 bytes long.
 Data: < &#177;&#207;&#185;            > F0 B1 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001E6B9CF6270, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001E6B9CFA3E0, 16 bytes long.
 Data: <8&#177;&#207;&#185;            > 38 B1 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001E6B9CFAD40, 16 bytes long.
 Data: < &#177;&#207;&#185;            > 10 B1 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001E6B9CFA980, 16 bytes long.
 Data: < &#176;&#207;&#185;            > E8 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E6B9CFACF0, 16 bytes long.
 Data: <&#192;&#176;&#207;&#185;            > C0 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001E6B9CFA110, 16 bytes long.
 Data: < &#176;&#207;&#185;            > 98 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001E6B9CFADE0, 16 bytes long.
 Data: <p&#176;&#207;&#185;            > 70 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001E6B9CFA7A0, 16 bytes long.
 Data: <&#208;D&#207;&#185;            > D0 44 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001E6B9CF44D0, 40 bytes long.
 Data: < &#167;&#207;&#185;    P&#206; &#187;    > A0 A7 CF B9 E6 01 00 00 50 CE ED BB E6 01 00 00 
{263} normal block at 0x000001E6B9CFACA0, 16 bytes long.
 Data: <P&#176;&#207;&#185;            > 50 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001E6B9CFA7F0, 16 bytes long.
 Data: <(&#176;&#207;&#185;            > 28 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001E6B9CF6450, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001E6B9CFAD90, 16 bytes long.
 Data: < &#176;&#207;&#185;            > 00 B0 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001E6B9CFB000, 992 bytes long.
 Data: < &#173;&#207;&#185;    Pd&#207;&#185;    > 90 AD CF B9 E6 01 00 00 50 64 CF B9 E6 01 00 00 
{95} normal block at 0x000001E6B9CF5D30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001E6B9CEEBC0, 16 bytes long.
 Data: <0I&#207;&#185;            > 30 49 CF B9 E6 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001E6B9CF4930, 40 bytes long.
 Data: <&#192; &#206;&#185;    0]&#207;&#185;    > C0 EB CE B9 E6 01 00 00 30 5D CF B9 E6 01 00 00 
{70} normal block at 0x000001E6B9CEE3A0, 16 bytes long.
 Data: <   ;            > 80 EA 03 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001E6B9CEE6C0, 16 bytes long.
 Data: <@  ;            > 40 E9 03 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001E6B9CEDF40, 16 bytes long.
 Data: < W ;            > F8 57 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001E6B9CEDEF0, 16 bytes long.
 Data: <&#216;W ;            > D8 57 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001E6B9CEEC10, 16 bytes long.
 Data: <P  ;            > 50 04 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001E6B9CEEB20, 16 bytes long.
 Data: <0  ;            > 30 04 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001E6B9CEDEA0, 16 bytes long.
 Data: <   ;            > E0 02 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001E6B9CEE800, 16 bytes long.
 Data: <   ;            > 10 04 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001E6B9CEDDB0, 16 bytes long.
 Data: <p  ;            > 70 04 00 3B F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001E6B9CEE710, 16 bytes long.
 Data: < &#192; :            > 18 C0 FE 3A F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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