Task 38689035

Name test_128-GPUGRID_TEST_ATM_40STEP_20261023-19-40-RND4886_0
Workunit 31630316
Created 28 Oct 2026, 17:51:03 UTC
Sent 28 Oct 2026, 17:51:05 UTC
Report deadline 2 Nov 2026, 17:51:05 UTC
Received 28 Oct 2026, 18:54:00 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 615292
Run time 30 min 51 sec
CPU time 25 min 47 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,314.97 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 692.95 MB
Peak swap size 6.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
12:22:45 (22720): wrapper (7.9.26016): starting
12:22:45 (22720): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
12:22:46 (22720): Library/usr/bin/tar.exe exited; CPU time 0.000000
12:22:46 (22720): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:52:49 (22720): C:/Windows/system32/cmd.exe exited; CPU time 1547.656250
12:52:49 (22720): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28129425 bytes.
Dumping objects ->
{3835228} normal block at 0x0000014ECACD45E0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835217} normal block at 0x0000014ECACD4570, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835206} normal block at 0x0000014ECACD4AB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835195} normal block at 0x0000014ECACD4A40, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835184} normal block at 0x0000014ECACD4810, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835153} normal block at 0x0000014ECC8AB600, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835142} normal block at 0x0000014ECC8BEE10, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835139} normal block at 0x0000014ECACCF380, 8 bytes long.
 Data: <   &#203;N   > 00 00 05 CB 4E 01 00 00 
{3834539} normal block at 0x0000014ECC8BECB0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x0000014ECACCEAC0, 8 bytes long.
 Data: < X&#147;&#204;N   > 20 58 93 CC 4E 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000014ECACD0C20, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000014ECACC6170, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000014ECACD55E0, 16 bytes long.
 Data: <&#168;e&#205;&#202;N           > A8 65 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000014ECACD54A0, 16 bytes long.
 Data: < e&#205;&#202;N           > 80 65 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000014ECACD01D0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000014ECACD5400, 16 bytes long.
 Data: <Xe&#205;&#202;N           > 58 65 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000014ECACD54F0, 16 bytes long.
 Data: <0e&#205;&#202;N           > 30 65 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000014ECACD5590, 16 bytes long.
 Data: < e&#205;&#202;N           > 08 65 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000014ECACD56D0, 16 bytes long.
 Data: <&#224;d&#205;&#202;N           > E0 64 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000014ECACD4880, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000014ECACD6080, 16 bytes long.
 Data: <&#232;&#142;&#204;&#202;N           > E8 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000014ECACCF870, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000014ECACD52C0, 16 bytes long.
 Data: <&#192;&#142;&#204;&#202;N           > C0 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000014ECACD5BD0, 16 bytes long.
 Data: < &#142;&#204;&#202;N           > 98 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000014ECACD5EF0, 16 bytes long.
 Data: <p&#142;&#204;&#202;N           > 70 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000014ECACD6030, 16 bytes long.
 Data: <H&#142;&#204;&#202;N           > 48 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000014ECACD5770, 16 bytes long.
 Data: < &#142;&#204;&#202;N           > 20 8E CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000014ECACD57C0, 16 bytes long.
 Data: <&#248; &#204;&#202;N           > F8 8D CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000014ECACCF750, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x0000014ECACD53B0, 16 bytes long.
 Data: <&#208; &#204;&#202;N           > D0 8D CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000014ECACC8DD0, 320 bytes long.
 Data: <&#176;S&#205;&#202;N   P&#247;&#204;&#202;N   > B0 53 CD CA 4E 01 00 00 50 F7 CC CA 4E 01 00 00 
{276} normal block at 0x0000014ECACD5DB0, 16 bytes long.
 Data: <&#192;d&#205;&#202;N           > C0 64 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000014ECACD5B80, 16 bytes long.
 Data: < d&#205;&#202;N           > 98 64 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000014ECACCF6F0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000014ECACD6210, 16 bytes long.
 Data: <pd&#205;&#202;N           > 70 64 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000014ECACCFB70, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000014ECACD5900, 16 bytes long.
 Data: <&#184;c&#205;&#202;N           > B8 63 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000014ECACD6170, 16 bytes long.
 Data: < c&#205;&#202;N           > 90 63 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000014ECACD5F90, 16 bytes long.
 Data: <hc&#205;&#202;N           > 68 63 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000014ECACD5540, 16 bytes long.
 Data: <@c&#205;&#202;N           > 40 63 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000014ECACD59A0, 16 bytes long.
 Data: < c&#205;&#202;N           > 18 63 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000014ECACD5FE0, 16 bytes long.
 Data: <&#240;b&#205;&#202;N           > F0 62 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000014ECACD5360, 16 bytes long.
 Data: < K&#205;&#202;N           > 20 4B CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000014ECACD4B20, 40 bytes long.
 Data: <`S&#205;&#202;N    &#182;&#138;&#204;N   > 60 53 CD CA 4E 01 00 00 00 B6 8A CC 4E 01 00 00 
{262} normal block at 0x0000014ECACD5A40, 16 bytes long.
 Data: <&#208;b&#205;&#202;N           > D0 62 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000014ECACD6120, 16 bytes long.
 Data: <&#168;b&#205;&#202;N           > A8 62 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000014ECACD0050, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000014ECACD5F40, 16 bytes long.
 Data: < b&#205;&#202;N           > 80 62 CD CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000014ECACD6280, 992 bytes long.
 Data: <@_&#205;&#202;N   P &#205;&#202;N   > 40 5F CD CA 4E 01 00 00 50 00 CD CA 4E 01 00 00 
{94} normal block at 0x0000014ECACCFE70, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x0000014ECACCEB10, 16 bytes long.
 Data: <&#192;&#228;&#204;&#202;N           > C0 E4 CC CA 4E 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x0000014ECACCE4C0, 40 bytes long.
 Data: < &#235;&#204;&#202;N   p&#254;&#204;&#202;N   > 10 EB CC CA 4E 01 00 00 70 FE CC CA 4E 01 00 00 
{71} normal block at 0x0000014ECACCF1F0, 16 bytes long.
 Data: < &#234;~ &#246;           > 80 EA 7E 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000014ECACCE980, 16 bytes long.
 Data: <@&#233;~ &#246;           > 40 E9 7E 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000014ECACCF330, 16 bytes long.
 Data: <&#248;W{ &#246;           > F8 57 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000014ECACCEF20, 16 bytes long.
 Data: <&#216;W{ &#246;           > D8 57 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000014ECACCE930, 16 bytes long.
 Data: <P { &#246;           > 50 04 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000014ECACCF1A0, 16 bytes long.
 Data: <0 { &#246;           > 30 04 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000014ECACCF010, 16 bytes long.
 Data: <&#224; { &#246;           > E0 02 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000014ECACCE890, 16 bytes long.
 Data: <  { &#246;           > 10 04 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000014ECACCE8E0, 16 bytes long.
 Data: <p { &#246;           > 70 04 7B 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000014ECACCECF0, 16 bytes long.
 Data: < &#192;y &#246;           > 18 C0 79 08 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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