Task 38688928

Name test_985-GPUGRID_TEST_ATM_40STEP_20261023-17-40-RND4642_0
Workunit 31630221
Created 28 Oct 2026, 17:04:19 UTC
Sent 28 Oct 2026, 17:04:23 UTC
Report deadline 2 Nov 2026, 17:04:23 UTC
Received 28 Oct 2026, 18:36:25 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 550227
Run time 1 hours 30 min 20 sec
CPU time 1 hours 17 min 59 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,806.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 673.24 MB
Peak swap size 5.24 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
10:09:20 (10064): wrapper (7.9.26016): starting
10:09:20 (10064): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
10:09:24 (10064): Library/usr/bin/tar.exe exited; CPU time 0.015625
10:09:24 (10064): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\4\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
11:35:38 (10064): C:/Windows/system32/cmd.exe exited; CPU time 4679.625000
11:35:38 (10064): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 73136157 bytes.
Dumping objects ->
{3835221} normal block at 0x000001B1695F0840, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835210} normal block at 0x000001B1695F0CA0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835199} normal block at 0x000001B1695F15D0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835188} normal block at 0x000001B1695F13A0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x000001B1695F1100, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835146} normal block at 0x000001B16969CF60, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835133} normal block at 0x000001B167AE6360, 8 bytes long.
 Data: <  &#171;g&#177;   > 00 00 AB 67 B1 01 00 00 
{3833949} normal block at 0x000001B167AE5A00, 8 bytes long.
 Data: <@&#230;&#188;g&#177;   > 40 E6 BC 67 B1 01 00 00 
..\zip\boinc_zip.cpp(122) : {306} normal block at 0x000001B167AF13D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001B167ADB730, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{290} normal block at 0x000001B167AF2DC0, 16 bytes long.
 Data: <XG&#175;g&#177;           > 58 47 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001B167AF2BE0, 16 bytes long.
 Data: <0G&#175;g&#177;           > 30 47 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001B167AEAF00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{287} normal block at 0x000001B167AF2B90, 16 bytes long.
 Data: < G&#175;g&#177;           > 08 47 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001B167AF2A50, 16 bytes long.
 Data: <&#224;F&#175;g&#177;           > E0 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001B167AF3130, 16 bytes long.
 Data: <&#184;F&#175;g&#177;           > B8 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001B167AF2F00, 16 bytes long.
 Data: < F&#175;g&#177;           > 90 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001B167AEC8D0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{282} normal block at 0x000001B167AF25A0, 16 bytes long.
 Data: <X&#191;&#173;g&#177;           > 58 BF AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001B167AEAB40, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{280} normal block at 0x000001B167AF3180, 16 bytes long.
 Data: <0&#191;&#173;g&#177;           > 30 BF AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001B167AF2640, 16 bytes long.
 Data: < &#191;&#173;g&#177;           > 08 BF AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001B167AF2D70, 16 bytes long.
 Data: <&#224;&#190;&#173;g&#177;           > E0 BE AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001B167AF2550, 16 bytes long.
 Data: <&#184;&#190;&#173;g&#177;           > B8 BE AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001B167AF2730, 16 bytes long.
 Data: < &#190;&#173;g&#177;           > 90 BE AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001B167AF2AA0, 16 bytes long.
 Data: <h&#190;&#173;g&#177;           > 68 BE AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001B167AEAE40, 32 bytes long.
 Data: <CUDA_DEVICE=1 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 31 00 50 55 
{272} normal block at 0x000001B167AF2820, 16 bytes long.
 Data: <@&#190;&#173;g&#177;           > 40 BE AD 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001B167ADBE40, 320 bytes long.
 Data: < (&#175;g&#177;   @&#174;&#174;g&#177;   > 20 28 AF 67 B1 01 00 00 40 AE AE 67 B1 01 00 00 
{270} normal block at 0x000001B167AF2960, 16 bytes long.
 Data: <pF&#175;g&#177;           > 70 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001B167AF26E0, 16 bytes long.
 Data: <HF&#175;g&#177;           > 48 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001B167AEB440, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{267} normal block at 0x000001B167AF2E60, 16 bytes long.
 Data: < F&#175;g&#177;           > 20 46 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001B167AEAAE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{265} normal block at 0x000001B167AF2FA0, 16 bytes long.
 Data: <hE&#175;g&#177;           > 68 45 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001B167AF2780, 16 bytes long.
 Data: <@E&#175;g&#177;           > 40 45 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001B167AF2A00, 16 bytes long.
 Data: < E&#175;g&#177;           > 18 45 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001B167AF2B40, 16 bytes long.
 Data: <&#240;D&#175;g&#177;           > F0 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001B167AF2C30, 16 bytes long.
 Data: <&#200;D&#175;g&#177;           > C8 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001B167AF3270, 16 bytes long.
 Data: <&#160;D&#175;g&#177;           > A0 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001B167AF2CD0, 16 bytes long.
 Data: <`&#200;&#174;g&#177;           > 60 C8 AE 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000001B167AEC860, 40 bytes long.
 Data: <&#208;,&#175;g&#177;   `&#207;ii&#177;   > D0 2C AF 67 B1 01 00 00 60 CF 69 69 B1 01 00 00 
{256} normal block at 0x000001B167AF25F0, 16 bytes long.
 Data: < D&#175;g&#177;           > 80 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001B167AF24B0, 16 bytes long.
 Data: <XD&#175;g&#177;           > 58 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x000001B167AEADE0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{253} normal block at 0x000001B167AF2910, 16 bytes long.
 Data: <0D&#175;g&#177;           > 30 44 AF 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000001B167AF4430, 992 bytes long.
 Data: < )&#175;g&#177;   &#224;&#173;&#174;g&#177;   > 10 29 AF 67 B1 01 00 00 E0 AD AE 67 B1 01 00 00 
{88} normal block at 0x000001B167AEA720, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{87} normal block at 0x000001B167AE61D0, 16 bytes long.
 Data: <&#192;&#197;&#174;g&#177;           > C0 C5 AE 67 B1 01 00 00 00 00 00 00 00 00 00 00 
{86} normal block at 0x000001B167AEC5C0, 40 bytes long.
 Data: <&#208;a&#174;g&#177;    &#167;&#174;g&#177;   > D0 61 AE 67 B1 01 00 00 20 A7 AE 67 B1 01 00 00 
{65} normal block at 0x000001B167AE6450, 16 bytes long.
 Data: < &#234;Q&#201;&#247;           > 80 EA 51 C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001B167AE6590, 16 bytes long.
 Data: <@&#233;Q&#201;&#247;           > 40 E9 51 C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001B167AE6400, 16 bytes long.
 Data: <&#248;WN&#201;&#247;           > F8 57 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001B167AE6540, 16 bytes long.
 Data: <&#216;WN&#201;&#247;           > D8 57 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001B167AE5CD0, 16 bytes long.
 Data: <P N&#201;&#247;           > 50 04 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001B167AE5C80, 16 bytes long.
 Data: <0 N&#201;&#247;           > 30 04 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001B167AE6680, 16 bytes long.
 Data: <&#224; N&#201;&#247;           > E0 02 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001B167AE6860, 16 bytes long.
 Data: <  N&#201;&#247;           > 10 04 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001B167AE65E0, 16 bytes long.
 Data: <p N&#201;&#247;           > 70 04 4E C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001B167AE64F0, 16 bytes long.
 Data: < &#192;L&#201;&#247;           > 18 C0 4C C9 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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