Task 38688811

Name test_479-GPUGRID_TEST_ATM_40STEP_20261023-38-40-RND8676_0
Workunit 31630121
Created 28 Oct 2026, 16:18:01 UTC
Sent 28 Oct 2026, 16:18:05 UTC
Report deadline 2 Nov 2026, 16:18:05 UTC
Received 28 Oct 2026, 19:53:16 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 629236
Run time 1 hours 24 min 33 sec
CPU time 1 hours 16 min 43 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 13,386.28 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 685.17 MB
Peak swap size 5.35 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:27:49 (4600): wrapper (7.9.26016): starting
19:27:49 (4600): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:27:51 (4600): Library/usr/bin/tar.exe exited; CPU time 0.000000
19:27:51 (4600): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
20:50:24 (4600): C:/Windows/system32/cmd.exe exited; CPU time 4603.671875
20:50:24 (4600): called boinc_finish(0)
0 bytes in 0 Free Blocks.
426 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 88318728 bytes.
Dumping objects ->
{3835279} normal block at 0x000001EBDF041100, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835268} normal block at 0x000001EBDF0414F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835257} normal block at 0x000001EBDF040DF0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835246} normal block at 0x000001EBDF041560, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835235} normal block at 0x000001EBDF041250, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835204} normal block at 0x000001EBDF0EB8A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835193} normal block at 0x000001EBDF0EC5D0, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835190} normal block at 0x000001EBDD4D6C40, 8 bytes long.
 Data: <  &#234;&#222;&#235;   > 00 00 EA DE EB 01 00 00 
{3834561} normal block at 0x000001EBDF0EC350, 85 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x000001EBDD4D7000, 8 bytes long.
 Data: <&#192;l &#223;&#235;   > C0 6C 1D DF EB 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000001EBDD4E12D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EBDD4C5E00, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000001EBDD4E2B30, 16 bytes long.
 Data: <x5N&#221;&#235;           > 78 35 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001EBDD4E2E50, 16 bytes long.
 Data: <P5N&#221;&#235;           > 50 35 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EBDD4DD440, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000001EBDD4E2CC0, 16 bytes long.
 Data: <(5N&#221;&#235;           > 28 35 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EBDD4E28B0, 16 bytes long.
 Data: < 5N&#221;&#235;           > 00 35 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001EBDD4E2860, 16 bytes long.
 Data: <&#216;4N&#221;&#235;           > D8 34 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EBDD4E27C0, 16 bytes long.
 Data: <&#176;4N&#221;&#235;           > B0 34 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001EBDD4DB180, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000001EBDD4E2590, 16 bytes long.
 Data: < ]L&#221;&#235;           > 98 5D 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EBDD4DC960, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000001EBDD4E2EA0, 16 bytes long.
 Data: <p]L&#221;&#235;           > 70 5D 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EBDD4E22C0, 16 bytes long.
 Data: <H]L&#221;&#235;           > 48 5D 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001EBDD4E2DB0, 16 bytes long.
 Data: < ]L&#221;&#235;           > 20 5D 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EBDD4E2D60, 16 bytes long.
 Data: <&#248;\L&#221;&#235;           > F8 5C 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001EBDD4E2220, 16 bytes long.
 Data: <&#208;\L&#221;&#235;           > D0 5C 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001EBDD4E2A90, 16 bytes long.
 Data: <&#168;\L&#221;&#235;           > A8 5C 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001EBDD4DC840, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000001EBDD4E29F0, 16 bytes long.
 Data: < \L&#221;&#235;           > 80 5C 4C DD EB 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EBDD4C5C80, 320 bytes long.
 Data: <&#240;)N&#221;&#235;   @&#200;M&#221;&#235;   > F0 29 4E DD EB 01 00 00 40 C8 4D DD EB 01 00 00 
{271} normal block at 0x000001EBDD4E2770, 16 bytes long.
 Data: < 4N&#221;&#235;           > 90 34 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001EBDD4E24F0, 16 bytes long.
 Data: <h4N&#221;&#235;           > 68 34 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001EBDD4DC9C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000001EBDD4E20E0, 16 bytes long.
 Data: <@4N&#221;&#235;           > 40 34 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001EBDD4DD020, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000001EBDD4E2C20, 16 bytes long.
 Data: < 3N&#221;&#235;           > 88 33 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EBDD4E2D10, 16 bytes long.
 Data: <`3N&#221;&#235;           > 60 33 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001EBDD4E2BD0, 16 bytes long.
 Data: <83N&#221;&#235;           > 38 33 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001EBDD4E2450, 16 bytes long.
 Data: < 3N&#221;&#235;           > 10 33 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001EBDD4E21D0, 16 bytes long.
 Data: <&#232;2N&#221;&#235;           > E8 32 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001EBDD4E29A0, 16 bytes long.
 Data: <&#192;2N&#221;&#235;           > C0 32 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001EBDD4E25E0, 16 bytes long.
 Data: < &#180;M&#221;&#235;           > 20 B4 4D DD EB 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001EBDD4DB420, 40 bytes long.
 Data: <&#224;%N&#221;&#235;   &#160;&#184; &#223;&#235;   > E0 25 4E DD EB 01 00 00 A0 B8 0E DF EB 01 00 00 
{257} normal block at 0x000001EBDD4E2680, 16 bytes long.
 Data: <&#160;2N&#221;&#235;           > A0 32 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001EBDD4E3030, 16 bytes long.
 Data: <x2N&#221;&#235;           > 78 32 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001EBDD4DC6C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000001EBDD4E2130, 16 bytes long.
 Data: <P2N&#221;&#235;           > 50 32 4E DD EB 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001EBDD4E3250, 992 bytes long.
 Data: <0!N&#221;&#235;   &#192;&#198;M&#221;&#235;   > 30 21 4E DD EB 01 00 00 C0 C6 4D DD EB 01 00 00 
{89} normal block at 0x000001EBDD4DCCC0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000001EBDD4D67E0, 16 bytes long.
 Data: <&#240;&#177;M&#221;&#235;           > F0 B1 4D DD EB 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000001EBDD4DB1F0, 40 bytes long.
 Data: <&#224;gM&#221;&#235;   &#192;&#204;M&#221;&#235;   > E0 67 4D DD EB 01 00 00 C0 CC 4D DD EB 01 00 00 
{66} normal block at 0x000001EBDD4D6BA0, 16 bytes long.
 Data: < &#234; &#177;&#247;           > 80 EA 9D B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EBDD4D6AB0, 16 bytes long.
 Data: <@&#233; &#177;&#247;           > 40 E9 9D B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EBDD4D6790, 16 bytes long.
 Data: <&#248;W&#154;&#177;&#247;           > F8 57 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001EBDD4D6740, 16 bytes long.
 Data: <&#216;W&#154;&#177;&#247;           > D8 57 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001EBDD4D6330, 16 bytes long.
 Data: <P &#154;&#177;&#247;           > 50 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001EBDD4D66F0, 16 bytes long.
 Data: <0 &#154;&#177;&#247;           > 30 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001EBDD4D6F60, 16 bytes long.
 Data: <&#224; &#154;&#177;&#247;           > E0 02 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001EBDD4D6150, 16 bytes long.
 Data: <  &#154;&#177;&#247;           > 10 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001EBDD4D6FB0, 16 bytes long.
 Data: <p &#154;&#177;&#247;           > 70 04 9A B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001EBDD4D6880, 16 bytes long.
 Data: < &#192; &#177;&#247;           > 18 C0 98 B1 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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