Task 38688770

Name test_897-GPUGRID_TEST_ATM_40STEP_20261023-10-40-RND6886_0
Workunit 31630092
Created 28 Oct 2026, 16:03:23 UTC
Sent 28 Oct 2026, 16:03:29 UTC
Report deadline 2 Nov 2026, 16:03:29 UTC
Received 28 Oct 2026, 21:50:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 590980
Run time 3 hours 22 min 24 sec
CPU time 3 hours 2 min 10 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 10,947.62 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 732.77 MB
Peak swap size 6.89 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:15:49 (23484): wrapper (7.9.26016): starting
19:15:49 (23484): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:15:51 (23484): Library/usr/bin/tar.exe exited; CPU time 0.015625
19:15:51 (23484): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\17\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
22:29:53 (23484): C:/Windows/system32/cmd.exe exited; CPU time 10683.828125
22:29:53 (23484): app exit status: 0x40010004
22:29:53 (23484): called boinc_finish(195)
22:35:29 (24560): wrapper (7.9.26016): starting
22:35:29 (24560): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
Un sous-r&#130;pertoire ou un fichier C:\ProgramData\BOINC\slots\17\tmp existe d&#130;j&#133;.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:50:34 (24560): C:/Windows/system32/cmd.exe exited; CPU time 733.843750
22:50:34 (24560): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 16558743 bytes.
Dumping objects ->
{1813} normal block at 0x0000026E9FF05060, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1802} normal block at 0x0000026E9FF04CE0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1791} normal block at 0x0000026E9FF04B20, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1780} normal block at 0x0000026E9FF04E30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1769} normal block at 0x0000026E9FF04B90, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1738} normal block at 0x0000026E9FEEFA20, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1727} normal block at 0x0000026E9FEEC690, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {1724} normal block at 0x0000026E9FF06290, 8 bytes long.
 Data: <  ( n   > 00 00 28 A0 6E 02 00 00 
{1006} normal block at 0x0000026E9FEF0E20, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{310} normal block at 0x0000026E9FF06600, 8 bytes long.
 Data: < k  n   > 80 6B F0 9F 6E 02 00 00 
{301} normal block at 0x0000026E9FEEEE10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000026E9FF06240, 16 bytes long.
 Data: < j  n           > 88 6A F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000026E9FF065B0, 16 bytes long.
 Data: <`j  n           > 60 6A F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000026E9FF00C20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000026E9FF05F70, 16 bytes long.
 Data: <8j  n           > 38 6A F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000026E9FF05AC0, 16 bytes long.
 Data: < j  n           > 10 6A F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000026E9FF05D90, 16 bytes long.
 Data: < i  n           > E8 69 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000026E9FF06560, 16 bytes long.
 Data: < i  n           > C0 69 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026E9FF04AB0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000026E9FF06510, 16 bytes long.
 Data: <H   n           > 48 CB EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000026E9FF00F80, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000026E9FF06100, 16 bytes long.
 Data: <    n           > 20 CB EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000026E9FF06420, 16 bytes long.
 Data: <    n           > F8 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000026E9FF05A20, 16 bytes long.
 Data: <    n           > D0 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000026E9FF063D0, 16 bytes long.
 Data: <    n           > A8 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026E9FF066A0, 16 bytes long.
 Data: <    n           > 80 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000026E9FF064C0, 16 bytes long.
 Data: <X   n           > 58 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000026E9FF01400, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000026E9FF060B0, 16 bytes long.
 Data: <0   n           > 30 CA EE 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026E9FEECA30, 320 bytes long.
 Data: < `  n       n   > B0 60 F0 9F 6E 02 00 00 00 14 F0 9F 6E 02 00 00 
{280} normal block at 0x0000026E9FF05B10, 16 bytes long.
 Data: < i  n           > A0 69 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000026E9FF062E0, 16 bytes long.
 Data: <xi  n           > 78 69 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026E9FF01460, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000026E9FF06380, 16 bytes long.
 Data: <Pi  n           > 50 69 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000026E9FF013A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000026E9FF05B60, 16 bytes long.
 Data: < h  n           > 98 68 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000026E9FF05CF0, 16 bytes long.
 Data: <ph  n           > 70 68 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000026E9FF06060, 16 bytes long.
 Data: <Hh  n           > 48 68 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000026E9FF06330, 16 bytes long.
 Data: < h  n           > 20 68 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000026E9FF057F0, 16 bytes long.
 Data: < g  n           > F8 67 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000026E9FF06650, 16 bytes long.
 Data: < g  n           > D0 67 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026E9FF057A0, 16 bytes long.
 Data: < L  n           > 00 4C F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026E9FF04C00, 40 bytes long.
 Data: < W  n       n   > A0 57 F0 9F 6E 02 00 00 20 FA EE 9F 6E 02 00 00 
{266} normal block at 0x0000026E9FF066F0, 16 bytes long.
 Data: < g  n           > B0 67 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026E9FF061F0, 16 bytes long.
 Data: < g  n           > 88 67 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026E9FF01340, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000026E9FF059D0, 16 bytes long.
 Data: <`g  n           > 60 67 F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026E9FF06760, 992 bytes long.
 Data: < Y  n   @   n   > D0 59 F0 9F 6E 02 00 00 40 13 F0 9F 6E 02 00 00 
{98} normal block at 0x0000026E9FF015E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000026E9FF00660, 16 bytes long.
 Data: <pL  n           > 70 4C F0 9F 6E 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000026E9FF04C70, 40 bytes long.
 Data: <`   n       n   > 60 06 F0 9F 6E 02 00 00 E0 15 F0 9F 6E 02 00 00 
{75} normal block at 0x0000026E9FF002F0, 16 bytes long.
 Data: <                > 80 EA 04 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000026E9FF00750, 16 bytes long.
 Data: <@               > 40 E9 04 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000026E9FF00610, 16 bytes long.
 Data: < W              > F8 57 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000026E9FF00890, 16 bytes long.
 Data: < W              > D8 57 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000026E9FF00110, 16 bytes long.
 Data: <P               > 50 04 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000026E9FF001B0, 16 bytes long.
 Data: <0               > 30 04 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000026E9FF007F0, 16 bytes long.
 Data: <                > E0 02 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026E9FEFFA80, 16 bytes long.
 Data: <                > 10 04 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026E9FF00160, 16 bytes long.
 Data: <p               > 70 04 01 FF F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026E9FEFFFD0, 16 bytes long.
 Data: <                > 18 C0 FF FE F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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