Task 38688727

Name test_747-GPUGRID_TEST_ATM_40STEP_20261023-33-40-RND7757_0
Workunit 31630051
Created 28 Oct 2026, 15:48:30 UTC
Sent 28 Oct 2026, 15:48:36 UTC
Report deadline 2 Nov 2026, 15:48:36 UTC
Received 28 Oct 2026, 17:19:26 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 618582
Run time 32 min 8 sec
CPU time 22 min 6 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 83,070.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 749.98 MB
Peak swap size 13.15 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
09:43:35 (25808): wrapper (7.9.26016): starting
09:43:35 (25808): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
09:43:36 (25808): Library/usr/bin/tar.exe exited; CPU time 0.000000
09:43:36 (25808): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\6\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
10:15:00 (25808): C:/Windows/system32/cmd.exe exited; CPU time 1326.515625
10:15:00 (25808): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 27762415 bytes.
Dumping objects ->
{3835569} normal block at 0x000001FE282FC430, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835558} normal block at 0x000001FE265C4280, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835547} normal block at 0x000001FE265C4980, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835536} normal block at 0x000001FE265C4910, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835525} normal block at 0x000001FE265C4830, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835494} normal block at 0x000001FE28347DF0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835483} normal block at 0x000001FE265E9A90, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835480} normal block at 0x000001FE265BE0A0, 8 bytes long.
 Data: <  &#179;&&#254;   > 00 00 B3 26 FE 01 00 00 
{3834699} normal block at 0x000001FE265E9390, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001FE265BE500, 8 bytes long.
 Data: <&#192;&#219; (&#254;   > C0 DB 1E 28 FE 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001FE265C02A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001FE265B5780, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001FE265C5500, 16 bytes long.
 Data: <(_\&&#254;           > 28 5F 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001FE265C5B40, 16 bytes long.
 Data: < _\&&#254;           > 00 5F 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001FE265BF290, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001FE265C4F10, 16 bytes long.
 Data: <&#216;^\&&#254;           > D8 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001FE265C51E0, 16 bytes long.
 Data: <&#176;^\&&#254;           > B0 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001FE265C5640, 16 bytes long.
 Data: < ^\&&#254;           > 88 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001FE265C5AF0, 16 bytes long.
 Data: <`^\&&#254;           > 60 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001FE265C48A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001FE265C50F0, 16 bytes long.
 Data: < &#221;[&&#254;           > 88 DD 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001FE265BF5F0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001FE265C4E70, 16 bytes long.
 Data: <`&#221;[&&#254;           > 60 DD 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001FE265C55F0, 16 bytes long.
 Data: <8&#221;[&&#254;           > 38 DD 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001FE265C5960, 16 bytes long.
 Data: < &#221;[&&#254;           > 10 DD 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001FE265C54B0, 16 bytes long.
 Data: <&#232;&#220;[&&#254;           > E8 DC 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001FE265C4E20, 16 bytes long.
 Data: <&#192;&#220;[&&#254;           > C0 DC 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001FE265C50A0, 16 bytes long.
 Data: < &#220;[&&#254;           > 98 DC 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001FE265BF350, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001FE265C5410, 16 bytes long.
 Data: <p&#220;[&&#254;           > 70 DC 5B 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001FE265BDC70, 320 bytes long.
 Data: < T\&&#254;   P&#243;[&&#254;   > 10 54 5C 26 FE 01 00 00 50 F3 5B 26 FE 01 00 00 
{276} normal block at 0x000001FE265C5AA0, 16 bytes long.
 Data: <@^\&&#254;           > 40 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001FE265C56E0, 16 bytes long.
 Data: < ^\&&#254;           > 18 5E 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001FE265BF230, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001FE265C5140, 16 bytes long.
 Data: <&#240;]\&&#254;           > F0 5D 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001FE265BF1D0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001FE265C5550, 16 bytes long.
 Data: <8]\&&#254;           > 38 5D 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001FE265C5870, 16 bytes long.
 Data: < ]\&&#254;           > 10 5D 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001FE265C5A50, 16 bytes long.
 Data: <&#232;\\&&#254;           > E8 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001FE265C55A0, 16 bytes long.
 Data: <&#192;\\&&#254;           > C0 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001FE265C5A00, 16 bytes long.
 Data: < \\&&#254;           > 98 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001FE265C52D0, 16 bytes long.
 Data: <p\\&&#254;           > 70 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001FE265C5820, 16 bytes long.
 Data: <`C\&&#254;           > 60 43 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001FE265C4360, 40 bytes long.
 Data: < X\&&#254;   &#240;}4(&#254;   > 20 58 5C 26 FE 01 00 00 F0 7D 34 28 FE 01 00 00 
{262} normal block at 0x000001FE265C57D0, 16 bytes long.
 Data: <P\\&&#254;           > 50 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001FE265C5460, 16 bytes long.
 Data: <(\\&&#254;           > 28 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001FE265BF650, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001FE265C5690, 16 bytes long.
 Data: < \\&&#254;           > 00 5C 5C 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001FE265C5C00, 992 bytes long.
 Data: < V\&&#254;   P&#246;[&&#254;   > 90 56 5C 26 FE 01 00 00 50 F6 5B 26 FE 01 00 00 
{94} normal block at 0x000001FE265BEFF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001FE265BDFB0, 16 bytes long.
 Data: <&#224;&#239;Z&&#254;           > E0 EF 5A 26 FE 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001FE265AEFE0, 40 bytes long.
 Data: <&#176;&#223;[&&#254;   &#240;&#239;[&&#254;   > B0 DF 5B 26 FE 01 00 00 F0 EF 5B 26 FE 01 00 00 
{71} normal block at 0x000001FE265BE690, 16 bytes long.
 Data: < &#234;#A&#247;           > 80 EA 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001FE265BE7D0, 16 bytes long.
 Data: <@&#233;#A&#247;           > 40 E9 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001FE265BE050, 16 bytes long.
 Data: <&#248;W A&#247;           > F8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001FE265BE320, 16 bytes long.
 Data: <&#216;W A&#247;           > D8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001FE265BECD0, 16 bytes long.
 Data: <P  A&#247;           > 50 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001FE265BE6E0, 16 bytes long.
 Data: <0  A&#247;           > 30 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001FE265BE640, 16 bytes long.
 Data: <&#224;  A&#247;           > E0 02 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001FE265BEA00, 16 bytes long.
 Data: <   A&#247;           > 10 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001FE265BE230, 16 bytes long.
 Data: <p  A&#247;           > 70 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001FE265BE000, 16 bytes long.
 Data: < &#192; A&#247;           > 18 C0 1E 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra