Task 38688455

Name test_782-GPUGRID_TEST_ATM_40STEP_20261023-39-40-RND6811_0
Workunit 31629807
Created 28 Oct 2026, 14:03:36 UTC
Sent 28 Oct 2026, 14:03:44 UTC
Report deadline 2 Nov 2026, 14:03:44 UTC
Received 28 Oct 2026, 15:15:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 618582
Run time 32 min 2 sec
CPU time 22 min 8 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 83,070.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 752.51 MB
Peak swap size 13.16 GB
Peak disk usage 3.75 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
07:41:55 (8020): wrapper (7.9.26016): starting
07:41:55 (8020): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:41:59 (8020): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:41:59 (8020): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:13:05 (8020): C:/Windows/system32/cmd.exe exited; CPU time 1328.328125
08:13:05 (8020): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 19179989 bytes.
Dumping objects ->
{3835569} normal block at 0x00000257BCCDC4D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835558} normal block at 0x00000257BAF442E0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835547} normal block at 0x00000257BAF44900, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835536} normal block at 0x00000257BAF44660, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835525} normal block at 0x00000257BAF445F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835494} normal block at 0x00000257BCD27740, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835483} normal block at 0x00000257BAF692A0, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835480} normal block at 0x00000257BAF3E950, 8 bytes long.
 Data: <  Q&#187;W   > 00 00 51 BB 57 02 00 00 
{3834699} normal block at 0x00000257BAF6A0A0, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x00000257BAF3ECC0, 8 bytes long.
 Data: <`K&#219;&#188;W   > 60 4B DB BC 57 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000257BAF3FED0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000257BAF35AD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000257BAF45950, 16 bytes long.
 Data: < _&#244;&#186;W           > 18 5F F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000257BAF44F50, 16 bytes long.
 Data: <&#240;^&#244;&#186;W           > F0 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000257BAF3F700, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000257BAF45360, 16 bytes long.
 Data: <&#200;^&#244;&#186;W           > C8 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000257BAF45450, 16 bytes long.
 Data: <&#160;^&#244;&#186;W           > A0 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000257BAF457C0, 16 bytes long.
 Data: <x^&#244;&#186;W           > 78 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000257BAF45B80, 16 bytes long.
 Data: <P^&#244;&#186;W           > 50 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000257BAF44970, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000257BAF45310, 16 bytes long.
 Data: <x&#221;&#243;&#186;W           > 78 DD F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000257BAF3EF80, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000257BAF452C0, 16 bytes long.
 Data: <P&#221;&#243;&#186;W           > 50 DD F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000257BAF45770, 16 bytes long.
 Data: <(&#221;&#243;&#186;W           > 28 DD F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000257BAF45680, 16 bytes long.
 Data: < &#221;&#243;&#186;W           > 00 DD F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000257BAF44F00, 16 bytes long.
 Data: <&#216;&#220;&#243;&#186;W           > D8 DC F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000257BAF45400, 16 bytes long.
 Data: <&#176;&#220;&#243;&#186;W           > B0 DC F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000257BAF45270, 16 bytes long.
 Data: < &#220;&#243;&#186;W           > 88 DC F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000257BAF3F6A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000257BAF456D0, 16 bytes long.
 Data: <`&#220;&#243;&#186;W           > 60 DC F3 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000257BAF3DC60, 320 bytes long.
 Data: <&#208;V&#244;&#186;W   &#160;&#246;&#243;&#186;W   > D0 56 F4 BA 57 02 00 00 A0 F6 F3 BA 57 02 00 00 
{276} normal block at 0x00000257BAF45B30, 16 bytes long.
 Data: <0^&#244;&#186;W           > 30 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000257BAF45AE0, 16 bytes long.
 Data: < ^&#244;&#186;W           > 08 5E F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000257BAF3F580, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000257BAF44CD0, 16 bytes long.
 Data: <&#224;]&#244;&#186;W           > E0 5D F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000257BAF3F520, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000257BAF45A90, 16 bytes long.
 Data: <(]&#244;&#186;W           > 28 5D F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000257BAF45720, 16 bytes long.
 Data: < ]&#244;&#186;W           > 00 5D F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000257BAF45630, 16 bytes long.
 Data: <&#216;\&#244;&#186;W           > D8 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000257BAF45590, 16 bytes long.
 Data: <&#176;\&#244;&#186;W           > B0 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000257BAF44C80, 16 bytes long.
 Data: < \&#244;&#186;W           > 88 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000257BAF45540, 16 bytes long.
 Data: <`\&#244;&#186;W           > 60 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000257BAF44D70, 16 bytes long.
 Data: <&#208;F&#244;&#186;W           > D0 46 F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000257BAF446D0, 40 bytes long.
 Data: <pM&#244;&#186;W   @w&#210;&#188;W   > 70 4D F4 BA 57 02 00 00 40 77 D2 BC 57 02 00 00 
{262} normal block at 0x00000257BAF44FF0, 16 bytes long.
 Data: <@\&#244;&#186;W           > 40 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000257BAF455E0, 16 bytes long.
 Data: < \&#244;&#186;W           > 18 5C F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000257BAF3F280, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000257BAF44DC0, 16 bytes long.
 Data: <&#240;[&#244;&#186;W           > F0 5B F4 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000257BAF45BF0, 992 bytes long.
 Data: <&#192;M&#244;&#186;W    &#242;&#243;&#186;W   > C0 4D F4 BA 57 02 00 00 80 F2 F3 BA 57 02 00 00 
{94} normal block at 0x00000257BAF3F4C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000257BAF3E4A0, 16 bytes long.
 Data: <&#176;&#239;&#242;&#186;W           > B0 EF F2 BA 57 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000257BAF2EFB0, 40 bytes long.
 Data: <&#160;&#228;&#243;&#186;W   &#192;&#244;&#243;&#186;W   > A0 E4 F3 BA 57 02 00 00 C0 F4 F3 BA 57 02 00 00 
{71} normal block at 0x00000257BAF3DF00, 16 bytes long.
 Data: < &#234;#A&#247;           > 80 EA 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000257BAF3E720, 16 bytes long.
 Data: <@&#233;#A&#247;           > 40 E9 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000257BAF3E130, 16 bytes long.
 Data: <&#248;W A&#247;           > F8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000257BAF3E0E0, 16 bytes long.
 Data: <&#216;W A&#247;           > D8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000257BAF3E770, 16 bytes long.
 Data: <P  A&#247;           > 50 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000257BAF3DEB0, 16 bytes long.
 Data: <0  A&#247;           > 30 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000257BAF3E450, 16 bytes long.
 Data: <&#224;  A&#247;           > E0 02 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000257BAF3E220, 16 bytes long.
 Data: <   A&#247;           > 10 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000257BAF3E090, 16 bytes long.
 Data: <p  A&#247;           > 70 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000257BAF3E040, 16 bytes long.
 Data: < &#192; A&#247;           > 18 C0 1E 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


©2026 Universitat Pompeu Fabra