Task 38688176

Name test_531-GPUGRID_TEST_ATM_40STEP_20261023-21-40-RND2848_0
Workunit 31629540
Created 28 Oct 2026, 12:09:26 UTC
Sent 28 Oct 2026, 12:09:30 UTC
Report deadline 2 Nov 2026, 12:09:30 UTC
Received 28 Oct 2026, 12:50:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 618582
Run time 30 min 18 sec
CPU time 22 min 6 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 83,070.51 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 749.48 MB
Peak swap size 13.15 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
05:20:03 (7652): wrapper (7.9.26016): starting
05:20:03 (7652): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
05:20:04 (7652): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:20:04 (7652): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:49:31 (7652): C:/Windows/system32/cmd.exe exited; CPU time 1326.265625
05:49:31 (7652): called boinc_finish(0)
0 bytes in 0 Free Blocks.
566 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 21003109 bytes.
Dumping objects ->
{3835569} normal block at 0x0000017F4983C7B0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835558} normal block at 0x0000017F47B24830, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835547} normal block at 0x0000017F47B24750, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835536} normal block at 0x0000017F47B24600, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835525} normal block at 0x0000017F47B24520, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835494} normal block at 0x0000017F4988AF70, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835483} normal block at 0x0000017F47B49E10, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835480} normal block at 0x0000017F47B1E6E0, 8 bytes long.
 Data: <  &#254;G    > 00 00 FE 47 7F 01 00 00 
{3834699} normal block at 0x0000017F47B49710, 155 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x0000017F47B1E050, 8 bytes long.
 Data: <&#192;&#219;lI    > C0 DB 6C 49 7F 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x0000017F47B202A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000017F47B15B70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x0000017F47B24C90, 16 bytes long.
 Data: <(_&#178;G            > 28 5F B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000017F47B25780, 16 bytes long.
 Data: < _&#178;G            > 00 5F B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000017F47B1F0B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x0000017F47B25640, 16 bytes long.
 Data: <&#216;^&#178;G            > D8 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000017F47B256E0, 16 bytes long.
 Data: <&#176;^&#178;G            > B0 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000017F47B24F60, 16 bytes long.
 Data: < ^&#178;G            > 88 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000017F47B25AA0, 16 bytes long.
 Data: <`^&#178;G            > 60 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000017F47B242F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x0000017F47B24F10, 16 bytes long.
 Data: < &#221;&#177;G            > 88 DD B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000017F47B1FBF0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x0000017F47B24E70, 16 bytes long.
 Data: <`&#221;&#177;G            > 60 DD B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000017F47B255F0, 16 bytes long.
 Data: <8&#221;&#177;G            > 38 DD B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000017F47B258C0, 16 bytes long.
 Data: < &#221;&#177;G            > 10 DD B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000017F47B25690, 16 bytes long.
 Data: <&#232;&#220;&#177;G            > E8 DC B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000017F47B25050, 16 bytes long.
 Data: <&#192;&#220;&#177;G            > C0 DC B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000017F47B25140, 16 bytes long.
 Data: < &#220;&#177;G            > 98 DC B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000017F47B1F2F0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x0000017F47B250F0, 16 bytes long.
 Data: <p&#220;&#177;G            > 70 DC B1 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000017F47B1DC70, 320 bytes long.
 Data: <&#240;P&#178;G    &#240;&#242;&#177;G    > F0 50 B2 47 7F 01 00 00 F0 F2 B1 47 7F 01 00 00 
{276} normal block at 0x0000017F47B24D80, 16 bytes long.
 Data: <@^&#178;G            > 40 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000017F47B253C0, 16 bytes long.
 Data: < ^&#178;G            > 18 5E B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000017F47B1F350, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x0000017F47B24E20, 16 bytes long.
 Data: <&#240;]&#178;G            > F0 5D B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000017F47B1F050, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x0000017F47B25460, 16 bytes long.
 Data: <8]&#178;G            > 38 5D B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000017F47B25280, 16 bytes long.
 Data: < ]&#178;G            > 10 5D B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000017F47B24EC0, 16 bytes long.
 Data: <&#232;\&#178;G            > E8 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000017F47B25410, 16 bytes long.
 Data: <&#192;\&#178;G            > C0 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000017F47B25870, 16 bytes long.
 Data: < \&#178;G            > 98 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000017F47B25AF0, 16 bytes long.
 Data: <p\&#178;G            > 70 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000017F47B25550, 16 bytes long.
 Data: <pF&#178;G            > 70 46 B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000017F47B24670, 40 bytes long.
 Data: <PU&#178;G    p&#175; I    > 50 55 B2 47 7F 01 00 00 70 AF 88 49 7F 01 00 00 
{262} normal block at 0x0000017F47B25320, 16 bytes long.
 Data: <P\&#178;G            > 50 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000017F47B255A0, 16 bytes long.
 Data: <(\&#178;G            > 28 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000017F47B1FB90, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x0000017F47B25370, 16 bytes long.
 Data: < \&#178;G            > 00 5C B2 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000017F47B25C00, 992 bytes long.
 Data: <pS&#178;G     &#251;&#177;G    > 70 53 B2 47 7F 01 00 00 90 FB B1 47 7F 01 00 00 
{94} normal block at 0x0000017F47B1EFF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x0000017F47B1E320, 16 bytes long.
 Data: <&#224;&#239;&#176;G            > E0 EF B0 47 7F 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x0000017F47B0EFE0, 40 bytes long.
 Data: < &#227;&#177;G    &#240;&#239;&#177;G    > 20 E3 B1 47 7F 01 00 00 F0 EF B1 47 7F 01 00 00 
{71} normal block at 0x0000017F47B1E910, 16 bytes long.
 Data: < &#234;#A&#247;           > 80 EA 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000017F47B1E410, 16 bytes long.
 Data: <@&#233;#A&#247;           > 40 E9 23 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000017F47B1E690, 16 bytes long.
 Data: <&#248;W A&#247;           > F8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000017F47B1E000, 16 bytes long.
 Data: <&#216;W A&#247;           > D8 57 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000017F47B1EC80, 16 bytes long.
 Data: <P  A&#247;           > 50 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000017F47B1E960, 16 bytes long.
 Data: <0  A&#247;           > 30 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000017F47B1E870, 16 bytes long.
 Data: <&#224;  A&#247;           > E0 02 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000017F47B1EB90, 16 bytes long.
 Data: <   A&#247;           > 10 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000017F47B1E7D0, 16 bytes long.
 Data: <p  A&#247;           > 70 04 20 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000017F47B1E500, 16 bytes long.
 Data: < &#192; A&#247;           > 18 C0 1E 41 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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