Task 38687993

Name test_585-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND8742_0
Workunit 31629363
Created 28 Oct 2026, 10:56:55 UTC
Sent 28 Oct 2026, 10:56:56 UTC
Report deadline 2 Nov 2026, 10:56:56 UTC
Received 28 Oct 2026, 12:40:06 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 602451
Run time 1 hours 41 min 45 sec
CPU time 1 hours 37 min 16 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 2,200.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 682.59 MB
Peak swap size 5.20 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
11:57:55 (652): wrapper (7.9.26016): starting
11:57:55 (652): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:57:56 (652): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:57:56 (652): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
13:39:51 (652): C:/Windows/system32/cmd.exe exited; CPU time 5836.750000
13:39:51 (652): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 98548051 bytes.
Dumping objects ->
{3835513} normal block at 0x000001C3C4B15390, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835502} normal block at 0x000001C3C4B150F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835491} normal block at 0x000001C3C4B14C90, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835480} normal block at 0x000001C3C4B14F30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835469} normal block at 0x000001C3C4B14EC0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835438} normal block at 0x000001C3C68146C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835425} normal block at 0x000001C3C4B0EEC0, 8 bytes long.
 Data: <  &#172;&#196;&#195;   > 00 00 AC C4 C3 01 00 00 
{3833967} normal block at 0x000001C3C4B0F500, 8 bytes long.
 Data: < J&#135;&#198;&#195;   > 20 4A 87 C6 C3 01 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x000001C3C4B112F0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x000001C3C4B05A40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x000001C3C4B15B30, 16 bytes long.
 Data: < g&#177;&#196;&#195;           > 88 67 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001C3C4B15EA0, 16 bytes long.
 Data: <`g&#177;&#196;&#195;           > 60 67 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001C3C4B10300, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x000001C3C4B15720, 16 bytes long.
 Data: <8g&#177;&#196;&#195;           > 38 67 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001C3C4B15A90, 16 bytes long.
 Data: < g&#177;&#196;&#195;           > 10 67 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001C3C4B15680, 16 bytes long.
 Data: <&#232;f&#177;&#196;&#195;           > E8 66 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001C3C4B15AE0, 16 bytes long.
 Data: <&#192;f&#177;&#196;&#195;           > C0 66 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001C3C4B14E50, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x000001C3C4B15630, 16 bytes long.
 Data: <X&#182;&#175;&#196;&#195;           > 58 B6 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001C3C4B10420, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x000001C3C4B158B0, 16 bytes long.
 Data: <0&#182;&#175;&#196;&#195;           > 30 B6 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001C3C4B16300, 16 bytes long.
 Data: < &#182;&#175;&#196;&#195;           > 08 B6 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001C3C4B155E0, 16 bytes long.
 Data: <&#224;&#181;&#175;&#196;&#195;           > E0 B5 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001C3C4B156D0, 16 bytes long.
 Data: <&#184;&#181;&#175;&#196;&#195;           > B8 B5 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001C3C4B15590, 16 bytes long.
 Data: < &#181;&#175;&#196;&#195;           > 90 B5 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001C3C4B15810, 16 bytes long.
 Data: <h&#181;&#175;&#196;&#195;           > 68 B5 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001C3C4B0FBE0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x000001C3C4B16210, 16 bytes long.
 Data: <@&#181;&#175;&#196;&#195;           > 40 B5 AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001C3C4AFB540, 320 bytes long.
 Data: < b&#177;&#196;&#195;   &#224;&#251;&#176;&#196;&#195;   > 10 62 B1 C4 C3 01 00 00 E0 FB B0 C4 C3 01 00 00 
{279} normal block at 0x000001C3C4B15CC0, 16 bytes long.
 Data: <&#160;f&#177;&#196;&#195;           > A0 66 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001C3C4B163F0, 16 bytes long.
 Data: <xf&#177;&#196;&#195;           > 78 66 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001C3C4B0FA60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x000001C3C4B15860, 16 bytes long.
 Data: <Pf&#177;&#196;&#195;           > 50 66 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001C3C4B0F9A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x000001C3C4B15FE0, 16 bytes long.
 Data: < e&#177;&#196;&#195;           > 98 65 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001C3C4B157C0, 16 bytes long.
 Data: <pe&#177;&#196;&#195;           > 70 65 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001C3C4B154A0, 16 bytes long.
 Data: <He&#177;&#196;&#195;           > 48 65 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001C3C4B15A40, 16 bytes long.
 Data: < e&#177;&#196;&#195;           > 20 65 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001C3C4B15E00, 16 bytes long.
 Data: <&#248;d&#177;&#196;&#195;           > F8 64 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001C3C4B16120, 16 bytes long.
 Data: <&#208;d&#177;&#196;&#195;           > D0 64 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001C3C4B15D10, 16 bytes long.
 Data: < P&#177;&#196;&#195;           > 80 50 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001C3C4B15080, 40 bytes long.
 Data: < ]&#177;&#196;&#195;   &#192;F &#198;&#195;   > 10 5D B1 C4 C3 01 00 00 C0 46 81 C6 C3 01 00 00 
{265} normal block at 0x000001C3C4B15540, 16 bytes long.
 Data: <&#176;d&#177;&#196;&#195;           > B0 64 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001C3C4B159A0, 16 bytes long.
 Data: < d&#177;&#196;&#195;           > 88 64 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001C3C4B0F8E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x000001C3C4B16030, 16 bytes long.
 Data: <`d&#177;&#196;&#195;           > 60 64 B1 C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001C3C4B16460, 992 bytes long.
 Data: <0`&#177;&#196;&#195;   &#224;&#248;&#176;&#196;&#195;   > 30 60 B1 C4 C3 01 00 00 E0 F8 B0 C4 C3 01 00 00 
{97} normal block at 0x000001C3C4B0FB80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x000001C3C4B0EAB0, 16 bytes long.
 Data: < &#239;&#175;&#196;&#195;           > 90 EF AF C4 C3 01 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x000001C3C4AFEF90, 40 bytes long.
 Data: <&#176;&#234;&#176;&#196;&#195;    &#251;&#176;&#196;&#195;   > B0 EA B0 C4 C3 01 00 00 80 FB B0 C4 C3 01 00 00 
{74} normal block at 0x000001C3C4B0E920, 16 bytes long.
 Data: < &#234;&#187;&#242;&#246;           > 80 EA BB F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000001C3C4B0EE70, 16 bytes long.
 Data: <@&#233;&#187;&#242;&#246;           > 40 E9 BB F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000001C3C4B0EE20, 16 bytes long.
 Data: <&#248;W&#184;&#242;&#246;           > F8 57 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001C3C4B0EB50, 16 bytes long.
 Data: <&#216;W&#184;&#242;&#246;           > D8 57 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001C3C4B0F1E0, 16 bytes long.
 Data: <P &#184;&#242;&#246;           > 50 04 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001C3C4B0F5A0, 16 bytes long.
 Data: <0 &#184;&#242;&#246;           > 30 04 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001C3C4B0EF60, 16 bytes long.
 Data: <&#224; &#184;&#242;&#246;           > E0 02 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001C3C4B0E8D0, 16 bytes long.
 Data: <  &#184;&#242;&#246;           > 10 04 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001C3C4B0F4B0, 16 bytes long.
 Data: <p &#184;&#242;&#246;           > 70 04 B8 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001C3C4B0F820, 16 bytes long.
 Data: < &#192;&#182;&#242;&#246;           > 18 C0 B6 F2 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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