Task 38687909

Name test_287-GPUGRID_TEST_ATM_40STEP_20261023-36-40-RND9350_0
Workunit 31629280
Created 28 Oct 2026, 10:29:01 UTC
Sent 28 Oct 2026, 10:29:05 UTC
Report deadline 2 Nov 2026, 10:29:05 UTC
Received 28 Oct 2026, 11:03:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 585486
Run time 33 min 50 sec
CPU time 30 min 51 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 21,377.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 705.86 MB
Peak swap size 6.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
05:30:47 (20848): wrapper (7.9.26016): starting
05:30:47 (20848): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
05:30:49 (20848): Library/usr/bin/tar.exe exited; CPU time 0.000000
05:30:49 (20848): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\13\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
06:03:14 (20848): C:/Windows/system32/cmd.exe exited; CPU time 1851.125000
06:03:14 (20848): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 42612379 bytes.
Dumping objects ->
{3835265} normal block at 0x000001F6B21FEF20, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835254} normal block at 0x000001F6B04C6330, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835243} normal block at 0x000001F6B04C62C0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835232} normal block at 0x000001F6B04C61E0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835221} normal block at 0x000001F6B04C6170, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835190} normal block at 0x000001F6B224CF90, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835177} normal block at 0x000001F6B04C0190, 8 bytes long.
 Data: <  &#158;&#176;&#246;   > 00 00 9E B0 F6 01 00 00 
{3833963} normal block at 0x000001F6B04BFF10, 8 bytes long.
 Data: < K-&#178;&#246;   > 90 4B 2D B2 F6 01 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x000001F6B04C19E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x000001F6B04B7370, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x000001F6B04C6720, 16 bytes long.
 Data: <xxL&#176;&#246;           > 78 78 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000001F6B04C71C0, 16 bytes long.
 Data: <PxL&#176;&#246;           > 50 78 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001F6B04C0D90, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x000001F6B04C6680, 16 bytes long.
 Data: <(xL&#176;&#246;           > 28 78 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001F6B04C7120, 16 bytes long.
 Data: < xL&#176;&#246;           > 00 78 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001F6B04C6C70, 16 bytes long.
 Data: <&#216;wL&#176;&#246;           > D8 77 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001F6B04C6A40, 16 bytes long.
 Data: <&#176;wL&#176;&#246;           > B0 77 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001F6B04C63A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x000001F6B04C6C20, 16 bytes long.
 Data: <&#200;&#248;K&#176;&#246;           > C8 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001F6B04C0FD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x000001F6B04C68B0, 16 bytes long.
 Data: <&#160;&#248;K&#176;&#246;           > A0 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001F6B04C69A0, 16 bytes long.
 Data: <x&#248;K&#176;&#246;           > 78 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001F6B04C70D0, 16 bytes long.
 Data: <P&#248;K&#176;&#246;           > 50 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001F6B04C7080, 16 bytes long.
 Data: <(&#248;K&#176;&#246;           > 28 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001F6B04C7350, 16 bytes long.
 Data: < &#248;K&#176;&#246;           > 00 F8 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001F6B04C7030, 16 bytes long.
 Data: <&#216;&#247;K&#176;&#246;           > D8 F7 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001F6B04C0F70, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x000001F6B04C6D60, 16 bytes long.
 Data: <&#176;&#247;K&#176;&#246;           > B0 F7 4B B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001F6B04BF7B0, 320 bytes long.
 Data: <`mL&#176;&#246;   p L&#176;&#246;   > 60 6D 4C B0 F6 01 00 00 70 0F 4C B0 F6 01 00 00 
{277} normal block at 0x000001F6B04C6950, 16 bytes long.
 Data: < wL&#176;&#246;           > 90 77 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001F6B04C72B0, 16 bytes long.
 Data: <hwL&#176;&#246;           > 68 77 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001F6B04C1690, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x000001F6B04C6590, 16 bytes long.
 Data: <@wL&#176;&#246;           > 40 77 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001F6B04C1330, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x000001F6B04C7300, 16 bytes long.
 Data: < vL&#176;&#246;           > 88 76 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001F6B04C6FE0, 16 bytes long.
 Data: <`vL&#176;&#246;           > 60 76 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001F6B04C6F90, 16 bytes long.
 Data: <8vL&#176;&#246;           > 38 76 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001F6B04C7210, 16 bytes long.
 Data: < vL&#176;&#246;           > 10 76 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001F6B04C7170, 16 bytes long.
 Data: <&#232;uL&#176;&#246;           > E8 75 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001F6B04C6F40, 16 bytes long.
 Data: <&#192;uL&#176;&#246;           > C0 75 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001F6B04C74E0, 16 bytes long.
 Data: <PbL&#176;&#246;           > 50 62 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001F6B04C6250, 40 bytes long.
 Data: <&#224;tL&#176;&#246;    &#207;$&#178;&#246;   > E0 74 4C B0 F6 01 00 00 90 CF 24 B2 F6 01 00 00 
{263} normal block at 0x000001F6B04C6EA0, 16 bytes long.
 Data: <&#160;uL&#176;&#246;           > A0 75 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001F6B04C66D0, 16 bytes long.
 Data: <xuL&#176;&#246;           > 78 75 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001F6B04C1810, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x000001F6B04C7490, 16 bytes long.
 Data: <PuL&#176;&#246;           > 50 75 4C B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001F6B04C7550, 992 bytes long.
 Data: < tL&#176;&#246;     L&#176;&#246;   > 90 74 4C B0 F6 01 00 00 10 18 4C B0 F6 01 00 00 
{95} normal block at 0x000001F6B04C0B50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x000001F6B04BFC90, 16 bytes long.
 Data: <&#192;&#225;J&#176;&#246;           > C0 E1 4A B0 F6 01 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x000001F6B04AE1C0, 40 bytes long.
 Data: < &#252;K&#176;&#246;   P L&#176;&#246;   > 90 FC 4B B0 F6 01 00 00 50 0B 4C B0 F6 01 00 00 
{72} normal block at 0x000001F6B04BFE70, 16 bytes long.
 Data: < &#234;L7&#247;           > 80 EA 4C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000001F6B04BFAB0, 16 bytes long.
 Data: <@&#233;L7&#247;           > 40 E9 4C 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001F6B04C0370, 16 bytes long.
 Data: <&#248;WI7&#247;           > F8 57 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001F6B04BFD80, 16 bytes long.
 Data: <&#216;WI7&#247;           > D8 57 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001F6B04BFA60, 16 bytes long.
 Data: <P I7&#247;           > 50 04 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001F6B04C0320, 16 bytes long.
 Data: <0 I7&#247;           > 30 04 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001F6B04C0050, 16 bytes long.
 Data: <&#224; I7&#247;           > E0 02 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001F6B04BFE20, 16 bytes long.
 Data: <  I7&#247;           > 10 04 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001F6B04C0780, 16 bytes long.
 Data: <p I7&#247;           > 70 04 49 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001F6B04C0000, 16 bytes long.
 Data: < &#192;G7&#247;           > 18 C0 47 37 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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