Task 38687907

Name test_246-GPUGRID_TEST_ATM_40STEP_20261023-38-40-RND6729_0
Workunit 31629278
Created 28 Oct 2026, 10:28:41 UTC
Sent 28 Oct 2026, 10:28:45 UTC
Report deadline 2 Nov 2026, 10:28:45 UTC
Received 28 Oct 2026, 10:43:55 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 626084
Run time 13 min 28 sec
CPU time 11 min 43 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 82,578.99 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 742.33 MB
Peak swap size 13.15 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
11:29:37 (12420): wrapper (7.9.26016): starting
11:29:37 (12420): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:29:38 (12420): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:29:38 (12420): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
11:42:32 (12420): C:/Windows/system32/cmd.exe exited; CPU time 703.906250
11:42:32 (12420): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 10682215 bytes.
Dumping objects ->
{3835237} normal block at 0x0000027354A6A2D0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x0000027354A6AB20, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835215} normal block at 0x0000027354A6A260, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835204} normal block at 0x0000027354A6A030, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835193} normal block at 0x0000027354A44CD0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835162} normal block at 0x00000273567DA900, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835151} normal block at 0x00000273567EEE10, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835148} normal block at 0x0000027354A3E300, 8 bytes long.
 Data: <   Us   > 00 00 06 55 73 02 00 00 
{3834544} normal block at 0x00000273567EF230, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x0000027354A3E2B0, 8 bytes long.
 Data: <&#176;D&#131;Vs   > B0 44 83 56 73 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x0000027354A41760, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000027354A36E10, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x0000027354A464E0, 16 bytes long.
 Data: < j&#164;Ts           > 08 6A A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000027354A46170, 16 bytes long.
 Data: <&#224;i&#164;Ts           > E0 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000027354A3FA30, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x0000027354A45A90, 16 bytes long.
 Data: <&#184;i&#164;Ts           > B8 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000027354A45720, 16 bytes long.
 Data: < i&#164;Ts           > 90 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000027354A45F90, 16 bytes long.
 Data: <hi&#164;Ts           > 68 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000027354A45D60, 16 bytes long.
 Data: <@i&#164;Ts           > 40 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000027354A44E20, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x0000027354A46030, 16 bytes long.
 Data: <&#232;&#231;&#162;Ts           > E8 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000027354A3F7F0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x0000027354A45D10, 16 bytes long.
 Data: <&#192;&#231;&#162;Ts           > C0 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000027354A45810, 16 bytes long.
 Data: < &#231;&#162;Ts           > 98 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000027354A45FE0, 16 bytes long.
 Data: <p&#231;&#162;Ts           > 70 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000027354A46260, 16 bytes long.
 Data: <H&#231;&#162;Ts           > 48 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000027354A45BD0, 16 bytes long.
 Data: < &#231;&#162;Ts           > 20 E7 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000027354A458B0, 16 bytes long.
 Data: <&#248;&#230;&#162;Ts           > F8 E6 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000027354A3EDD0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x0000027354A46670, 16 bytes long.
 Data: <&#208;&#230;&#162;Ts           > D0 E6 A2 54 73 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000027354A2E6D0, 320 bytes long.
 Data: <pf&#164;Ts   &#208;&#237;&#163;Ts   > 70 66 A4 54 73 02 00 00 D0 ED A3 54 73 02 00 00 
{277} normal block at 0x0000027354A457C0, 16 bytes long.
 Data: < i&#164;Ts           > 20 69 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000027354A45C20, 16 bytes long.
 Data: <&#248;h&#164;Ts           > F8 68 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000027354A3FC10, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x0000027354A462B0, 16 bytes long.
 Data: <&#208;h&#164;Ts           > D0 68 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000027354A3F910, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x0000027354A460D0, 16 bytes long.
 Data: < h&#164;Ts           > 18 68 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000027354A46440, 16 bytes long.
 Data: <&#240;g&#164;Ts           > F0 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000027354A45F40, 16 bytes long.
 Data: <&#200;g&#164;Ts           > C8 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000027354A45E50, 16 bytes long.
 Data: <&#160;g&#164;Ts           > A0 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027354A45AE0, 16 bytes long.
 Data: <xg&#164;Ts           > 78 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000027354A463F0, 16 bytes long.
 Data: <Pg&#164;Ts           > 50 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000027354A46350, 16 bytes long.
 Data: <@M&#164;Ts           > 40 4D A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000027354A44D40, 40 bytes long.
 Data: <Pc&#164;Ts    &#169;}Vs   > 50 63 A4 54 73 02 00 00 00 A9 7D 56 73 02 00 00 
{263} normal block at 0x0000027354A46120, 16 bytes long.
 Data: <0g&#164;Ts           > 30 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000027354A46080, 16 bytes long.
 Data: < g&#164;Ts           > 08 67 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000027354A3F2B0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x0000027354A45A40, 16 bytes long.
 Data: <&#224;f&#164;Ts           > E0 66 A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000027354A466E0, 992 bytes long.
 Data: <@Z&#164;Ts   &#176;&#242;&#163;Ts   > 40 5A A4 54 73 02 00 00 B0 F2 A3 54 73 02 00 00 
{95} normal block at 0x0000027354A3F010, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x0000027354A3D5E0, 16 bytes long.
 Data: < K&#164;Ts           > 10 4B A4 54 73 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x0000027354A44B10, 40 bytes long.
 Data: <&#224;&#213;&#163;Ts    &#240;&#163;Ts   > E0 D5 A3 54 73 02 00 00 10 F0 A3 54 73 02 00 00 
{72} normal block at 0x0000027354A3D810, 16 bytes long.
 Data: < &#234;&#201;{&#247;           > 80 EA C9 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000027354A3DB30, 16 bytes long.
 Data: <@&#233;&#201;{&#247;           > 40 E9 C9 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000027354A3D770, 16 bytes long.
 Data: <&#248;W&#198;{&#247;           > F8 57 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000027354A3E260, 16 bytes long.
 Data: <&#216;W&#198;{&#247;           > D8 57 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000027354A3E210, 16 bytes long.
 Data: <P &#198;{&#247;           > 50 04 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000027354A3E1C0, 16 bytes long.
 Data: <0 &#198;{&#247;           > 30 04 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000027354A3DC20, 16 bytes long.
 Data: <&#224; &#198;{&#247;           > E0 02 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000027354A3E120, 16 bytes long.
 Data: <  &#198;{&#247;           > 10 04 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000027354A3D450, 16 bytes long.
 Data: <p &#198;{&#247;           > 70 04 C6 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000027354A3DF40, 16 bytes long.
 Data: < &#192;&#196;{&#247;           > 18 C0 C4 7B F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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