Task 38687598

Name test_566-GPUGRID_TEST_ATM_40STEP_20261023-28-40-RND6042_0
Workunit 31628982
Created 28 Oct 2026, 8:39:52 UTC
Sent 28 Oct 2026, 8:40:00 UTC
Report deadline 2 Nov 2026, 8:40:00 UTC
Received 28 Oct 2026, 10:19:23 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 47 min 24 sec
CPU time 47 min 18 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,710.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 651.32 MB
Peak swap size 6.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
17:27:34 (32216): wrapper (7.9.26016): starting
17:27:34 (32216): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:27:35 (32216): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:27:35 (32216): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:14:05 (32216): C:/Windows/system32/cmd.exe exited; CPU time 2838.546875
18:14:05 (32216): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 42226267 bytes.
Dumping objects ->
{3835255} normal block at 0x000002053B78CCD0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835244} normal block at 0x000002053B78D1A0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x000002053B78C8E0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835222} normal block at 0x000002053B78CA30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x000002053B78CE90, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835180} normal block at 0x000002053EFC4AF0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835167} normal block at 0x000002053B789F80, 8 bytes long.
 Data: <  B=    > 00 00 42 3D 05 02 00 00 
{3834025} normal block at 0x000002053B78A0C0, 8 bytes long.
 Data: <  x;    > 10 A3 78 3B 05 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002053B787D40, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002053B788C80, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002053B789E40, 16 bytes long.
 Data: <  x;            > 08 92 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002053B789AD0, 16 bytes long.
 Data: <  x;            > E0 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002053B783060, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002053B7894E0, 16 bytes long.
 Data: <  x;            > B8 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002053B789710, 16 bytes long.
 Data: <  x;            > 90 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002053B78A110, 16 bytes long.
 Data: <h x;            > 68 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002053B78A1B0, 16 bytes long.
 Data: <@ x;            > 40 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002053B781D60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002053B7896C0, 16 bytes long.
 Data: <  x;            > 18 8C 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002053B783720, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002053B7859B0, 16 bytes long.
 Data: <  x;            > F0 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002053B7855F0, 16 bytes long.
 Data: <  x;            > C8 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002053B785460, 16 bytes long.
 Data: <  x;            > A0 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002053B785410, 16 bytes long.
 Data: <x x;            > 78 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002053B785370, 16 bytes long.
 Data: <P x;            > 50 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002053B785230, 16 bytes long.
 Data: <( x;            > 28 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002053B783240, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002053B785960, 16 bytes long.
 Data: <  x;            > 00 8B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002053B788B00, 320 bytes long.
 Data: <`Yx;    @2x;    > 60 59 78 3B 05 02 00 00 40 32 78 3B 05 02 00 00 
{268} normal block at 0x000002053B785820, 16 bytes long.
 Data: <  x;            > 20 91 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002053B7850F0, 16 bytes long.
 Data: <  x;            > F8 90 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002053B783180, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002053B785000, 16 bytes long.
 Data: <  x;            > D0 90 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002053B782E20, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002053B784BA0, 16 bytes long.
 Data: <  x;            > 18 90 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002053B784FB0, 16 bytes long.
 Data: <  x;            > F0 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002053B784F10, 16 bytes long.
 Data: <  x;            > C8 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002053B784E70, 16 bytes long.
 Data: <  x;            > A0 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002053B784D30, 16 bytes long.
 Data: <x x;            > 78 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002053B7857D0, 16 bytes long.
 Data: <P x;            > 50 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002053B785780, 16 bytes long.
 Data: <0 x;            > 30 1B 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002053B781B30, 40 bytes long.
 Data: < Wx;     J >    > 80 57 78 3B 05 02 00 00 F0 4A FC 3E 05 02 00 00 
{254} normal block at 0x000002053B784C40, 16 bytes long.
 Data: <0 x;            > 30 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002053B7855A0, 16 bytes long.
 Data: <  x;            > 08 8F 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002053B782CA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002053B784B50, 16 bytes long.
 Data: <  x;            > E0 8E 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002053B788EE0, 992 bytes long.
 Data: <PKx;     ,x;    > 50 4B 78 3B 05 02 00 00 A0 2C 78 3B 05 02 00 00 
{86} normal block at 0x000002053B7830C0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002053B7850A0, 16 bytes long.
 Data: <  x;            > E0 20 78 3B 05 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002053B7820E0, 40 bytes long.
 Data: < Px;     0x;    > A0 50 78 3B 05 02 00 00 C0 30 78 3B 05 02 00 00 
{61} normal block at 0x000002053B785A50, 16 bytes long.
 Data: <                > 80 EA D8 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002053B785050, 16 bytes long.
 Data: <@               > 40 E9 D8 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002053B785320, 16 bytes long.
 Data: < W              > F8 57 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002053B7853C0, 16 bytes long.
 Data: < W              > D8 57 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002053B784DD0, 16 bytes long.
 Data: <P               > 50 04 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002053B784BF0, 16 bytes long.
 Data: <0               > 30 04 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002053B785190, 16 bytes long.
 Data: <                > E0 02 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002053B785550, 16 bytes long.
 Data: <                > 10 04 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002053B784E20, 16 bytes long.
 Data: <p               > 70 04 D5 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000002053B785280, 16 bytes long.
 Data: <                > 18 C0 D3 A7 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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