Task 38687274

Name test_989-GPUGRID_TEST_ATM_40STEP_20261023-35-40-RND6001_0
Workunit 31628668
Created 28 Oct 2026, 6:53:42 UTC
Sent 28 Oct 2026, 6:53:46 UTC
Report deadline 2 Nov 2026, 6:53:46 UTC
Received 28 Oct 2026, 8:01:28 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 652326
Run time 24 min 37 sec
CPU time 23 min 11 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 33,165.87 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 730.09 MB
Peak swap size 12.99 GB
Peak disk usage 3.53 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
16:37:05 (34800): wrapper (7.9.26016): starting
16:37:05 (34800): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:37:06 (34800): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:37:06 (34800): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\2\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:00:46 (34800): C:/Windows/system32/cmd.exe exited; CPU time 1391.343750
17:00:46 (34800): called boinc_finish(0)
0 bytes in 0 Free Blocks.
536 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28971951 bytes.
Dumping objects ->
{3835342} normal block at 0x0000024C09213C00, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835331} normal block at 0x0000024C07085900, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835320} normal block at 0x0000024C07085F90, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835309} normal block at 0x0000024C07085DD0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835298} normal block at 0x0000024C07085D60, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835267} normal block at 0x0000024C09187700, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835256} normal block at 0x0000024C070DCE60, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835253} normal block at 0x0000024C07080080, 8 bytes long.
 Data: <  k L   > 00 00 6B 07 4C 02 00 00 
{3834654} normal block at 0x0000024C070DC8B0, 140 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3834069} normal block at 0x0000024C070803F0, 8 bytes long.
 Data: < R  L   > 90 52 08 07 4C 02 00 00 
..\zip\boinc_zip.cpp(122) : {315} normal block at 0x0000024C070816A0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{300} normal block at 0x0000024C070770E0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{299} normal block at 0x0000024C070861B0, 16 bytes long.
 Data: < u  L           > A8 75 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000024C07086ED0, 16 bytes long.
 Data: < u  L           > 80 75 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000024C07080550, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{296} normal block at 0x0000024C07086750, 16 bytes long.
 Data: <Xu  L           > 58 75 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000024C07086110, 16 bytes long.
 Data: <0u  L           > 30 75 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000024C070866B0, 16 bytes long.
 Data: < u  L           > 08 75 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000024C07086A70, 16 bytes long.
 Data: < t  L           > E0 74 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000024C070859E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{291} normal block at 0x0000024C07086660, 16 bytes long.
 Data: <    L           > B8 B5 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000024C07080730, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{289} normal block at 0x0000024C07086840, 16 bytes long.
 Data: <    L           > 90 B5 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024C07086430, 16 bytes long.
 Data: <h   L           > 68 B5 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024C07086A20, 16 bytes long.
 Data: <@   L           > 40 B5 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000024C07086D90, 16 bytes long.
 Data: <    L           > 18 B5 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000024C07086390, 16 bytes long.
 Data: <    L           > F0 B4 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000024C07086610, 16 bytes long.
 Data: <    L           > C8 B4 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000024C070806D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{281} normal block at 0x0000024C07087060, 16 bytes long.
 Data: <    L           > A0 B4 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000024C0706B4A0, 320 bytes long.
 Data: <`p  L       L   > 60 70 08 07 4C 02 00 00 D0 06 08 07 4C 02 00 00 
{279} normal block at 0x0000024C070862F0, 16 bytes long.
 Data: < t  L           > C0 74 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000024C07086520, 16 bytes long.
 Data: < t  L           > 98 74 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000024C07080E50, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{276} normal block at 0x0000024C07086480, 16 bytes long.
 Data: <pt  L           > 70 74 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000024C07080910, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{274} normal block at 0x0000024C070865C0, 16 bytes long.
 Data: < s  L           > B8 73 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000024C07086E80, 16 bytes long.
 Data: < s  L           > 90 73 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000024C070868E0, 16 bytes long.
 Data: <hs  L           > 68 73 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000024C070867F0, 16 bytes long.
 Data: <@s  L           > 40 73 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000024C07086340, 16 bytes long.
 Data: < s  L           > 18 73 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000024C07086890, 16 bytes long.
 Data: < r  L           > F0 72 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000024C07086E30, 16 bytes long.
 Data: <pY  L           > 70 59 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000024C07085970, 40 bytes long.
 Data: <0n  L    w 	L   > 30 6E 08 07 4C 02 00 00 00 77 18 09 4C 02 00 00 
{265} normal block at 0x0000024C07087010, 16 bytes long.
 Data: < r  L           > D0 72 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000024C07086BB0, 16 bytes long.
 Data: < r  L           > A8 72 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000024C070812D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{262} normal block at 0x0000024C070863E0, 16 bytes long.
 Data: < r  L           > 80 72 08 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000024C07087280, 992 bytes long.
 Data: < c  L       L   > E0 63 08 07 4C 02 00 00 D0 12 08 07 4C 02 00 00 
{97} normal block at 0x0000024C07080CD0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{96} normal block at 0x0000024C0707FD60, 16 bytes long.
 Data: <    L           > 10 E0 06 07 4C 02 00 00 00 00 00 00 00 00 00 00 
{95} normal block at 0x0000024C0706E010, 40 bytes long.
 Data: <`   L       L   > 60 FD 07 07 4C 02 00 00 D0 0C 08 07 4C 02 00 00 
{72} normal block at 0x0000024C0707FEA0, 16 bytes long.
 Data: <   S            > 80 EA 86 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000024C0707FFE0, 16 bytes long.
 Data: <@  S            > 40 E9 86 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000024C0707F8B0, 16 bytes long.
 Data: < W S            > F8 57 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000024C070803A0, 16 bytes long.
 Data: < W S            > D8 57 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000024C0707FD10, 16 bytes long.
 Data: <P  S            > 50 04 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000024C07080030, 16 bytes long.
 Data: <0  S            > 30 04 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000024C07080300, 16 bytes long.
 Data: <   S            > E0 02 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000024C070802B0, 16 bytes long.
 Data: <   S            > 10 04 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000024C07080490, 16 bytes long.
 Data: <p  S            > 70 04 83 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000024C0707FCC0, 16 bytes long.
 Data: <   S            > 18 C0 81 53 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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