Task 38687272

Name test_700-GPUGRID_TEST_ATM_40STEP_20261023-24-40-RND2043_0
Workunit 31628666
Created 28 Oct 2026, 6:53:01 UTC
Sent 28 Oct 2026, 6:53:01 UTC
Report deadline 2 Nov 2026, 6:53:01 UTC
Received 28 Oct 2026, 7:32:02 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 590887
Run time 38 min 16 sec
CPU time 34 min 20 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 11,977.76 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 674.17 MB
Peak swap size 5.28 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:55:19 (34304): wrapper (7.9.26016): starting
01:55:19 (34304): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:55:21 (34304): Library/usr/bin/tar.exe exited; CPU time 0.000000
01:55:21 (34304): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\ProgramData\BOINC\slots\11\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
02:31:41 (34304): C:/Windows/system32/cmd.exe exited; CPU time 2060.671875
02:31:41 (34304): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 35723589 bytes.
Dumping objects ->
{3835286} normal block at 0x000001402C5EEEB0, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x000001402C5EEBA0, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835264} normal block at 0x000001402C5EEE40, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835253} normal block at 0x000001402A9D5D80, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835242} normal block at 0x000001402A9D5D10, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835211} normal block at 0x000001402C63C990, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835200} normal block at 0x000001402AA3BC70, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835197} normal block at 0x000001402A9CE350, 8 bytes long.
 Data: <  &#149;*@   > 00 00 95 2A 40 01 00 00 
{3834570} normal block at 0x000001402AA3BAD0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001402A9CDE00, 8 bytes long.
 Data: <@&#234;&#170;*@   > 40 EA AA 2A 40 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001402A9D27D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001402A9C6B40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001402A9D6DC0, 16 bytes long.
 Data: < w *@           > 98 77 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001402A9D6780, 16 bytes long.
 Data: <pw *@           > 70 77 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001402A9D0C00, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001402A9D68C0, 16 bytes long.
 Data: <Hw *@           > 48 77 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001402A9D6CD0, 16 bytes long.
 Data: < w *@           > 20 77 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001402A9D6870, 16 bytes long.
 Data: <&#248;v *@           > F8 76 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001402A9D6EB0, 16 bytes long.
 Data: <&#208;v *@           > D0 76 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001402A9D5B50, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001402A9D7310, 16 bytes long.
 Data: <(&#255;&#156;*@           > 28 FF 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001402A9D0AE0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001402A9D65F0, 16 bytes long.
 Data: < &#255;&#156;*@           > 00 FF 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001402A9D6960, 16 bytes long.
 Data: <&#216;&#254;&#156;*@           > D8 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001402A9D6C80, 16 bytes long.
 Data: <&#176;&#254;&#156;*@           > B0 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001402A9D6910, 16 bytes long.
 Data: < &#254;&#156;*@           > 88 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001402A9D70E0, 16 bytes long.
 Data: <`&#254;&#156;*@           > 60 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001402A9D6E10, 16 bytes long.
 Data: <8&#254;&#156;*@           > 38 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001402A9D04E0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001402A9D6FA0, 16 bytes long.
 Data: < &#254;&#156;*@           > 10 FE 9C 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001402A9CFE10, 320 bytes long.
 Data: <&#160;o *@   &#224;  *@   > A0 6F 9D 2A 40 01 00 00 E0 04 9D 2A 40 01 00 00 
{276} normal block at 0x000001402A9D73B0, 16 bytes long.
 Data: <&#176;v *@           > B0 76 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001402A9D6F50, 16 bytes long.
 Data: < v *@           > 88 76 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001402A9D0960, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001402A9D66E0, 16 bytes long.
 Data: <`v *@           > 60 76 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001402A9D02A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001402A9D6B40, 16 bytes long.
 Data: <&#168;u *@           > A8 75 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001402A9D64B0, 16 bytes long.
 Data: < u *@           > 80 75 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001402A9D6D70, 16 bytes long.
 Data: <Xu *@           > 58 75 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001402A9D6F00, 16 bytes long.
 Data: <0u *@           > 30 75 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001402A9D7090, 16 bytes long.
 Data: < u *@           > 08 75 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001402A9D6AF0, 16 bytes long.
 Data: <&#224;t *@           > E0 74 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001402A9D6FF0, 16 bytes long.
 Data: < Z *@           > 00 5A 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001402A9D5A00, 40 bytes long.
 Data: <&#240;o *@    &#201;c,@   > F0 6F 9D 2A 40 01 00 00 90 C9 63 2C 40 01 00 00 
{262} normal block at 0x000001402A9D6AA0, 16 bytes long.
 Data: <&#192;t *@           > C0 74 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001402A9D6730, 16 bytes long.
 Data: < t *@           > 98 74 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001402A9D0180, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001402A9D6BE0, 16 bytes long.
 Data: <pt *@           > 70 74 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001402A9D7470, 992 bytes long.
 Data: <&#224;k *@      *@   > E0 6B 9D 2A 40 01 00 00 80 01 9D 2A 40 01 00 00 
{94} normal block at 0x000001402A9D0360, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001402A9CDF90, 16 bytes long.
 Data: <&#208;W *@           > D0 57 9D 2A 40 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001402A9D57D0, 40 bytes long.
 Data: < &#223;&#156;*@   `  *@   > 90 DF 9C 2A 40 01 00 00 60 03 9D 2A 40 01 00 00 
{71} normal block at 0x000001402A9CE6C0, 16 bytes long.
 Data: < &#234;&#155;&#216;&#246;           > 80 EA 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001402A9CE080, 16 bytes long.
 Data: <@&#233;&#155;&#216;&#246;           > 40 E9 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001402A9CE760, 16 bytes long.
 Data: <&#248;W &#216;&#246;           > F8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001402A9CE530, 16 bytes long.
 Data: <&#216;W &#216;&#246;           > D8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001402A9CE1C0, 16 bytes long.
 Data: <P  &#216;&#246;           > 50 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001402A9CDDB0, 16 bytes long.
 Data: <0  &#216;&#246;           > 30 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001402A9CE620, 16 bytes long.
 Data: <&#224;  &#216;&#246;           > E0 02 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001402A9CE8A0, 16 bytes long.
 Data: <   &#216;&#246;           > 10 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001402A9CDEF0, 16 bytes long.
 Data: <p  &#216;&#246;           > 70 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001402A9CEA30, 16 bytes long.
 Data: < &#192;&#150;&#216;&#246;           > 18 C0 96 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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