Task 38687229

Name test_609-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND8489_0
Workunit 31628623
Created 28 Oct 2026, 6:38:51 UTC
Sent 28 Oct 2026, 6:38:56 UTC
Report deadline 2 Nov 2026, 6:38:56 UTC
Received 28 Oct 2026, 7:50:32 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 156955
Run time 35 min 18 sec
CPU time 32 min 20 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 22,242.34 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 713.40 MB
Peak swap size 8.48 GB
Peak disk usage 3.02 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
08:16:00 (29116): wrapper (7.9.26016): starting
08:16:00 (29116): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:16:03 (29116): Library/usr/bin/tar.exe exited; CPU time 0.015625
08:16:03 (29116): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'D:\Boinc_data\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\Boinc_data\slots\5\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:49:41 (29116): C:/Windows/system32/cmd.exe exited; CPU time 1940.203125
08:49:41 (29116): called boinc_finish(0)
0 bytes in 0 Free Blocks.
380 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 45083435 bytes.
Dumping objects ->
{3835307} normal block at 0x000001EB328C64E0, 48 bytes long.
 Data: <PATH=D:\Boinc_da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835296} normal block at 0x000001EB34653330, 32 bytes long.
 Data: <HOME=D:\Boinc_da> 48 4F 4D 45 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835285} normal block at 0x000001EB34653A50, 32 bytes long.
 Data: <TMP=D:\Boinc_dat> 54 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 74 
{3835274} normal block at 0x000001EB34653CF0, 32 bytes long.
 Data: <TEMP=D:\Boinc_da> 54 45 4D 50 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835263} normal block at 0x000001EB34653930, 32 bytes long.
 Data: <TMPDIR=D:\Boinc_> 54 4D 50 44 49 52 3D 44 3A 5C 42 6F 69 6E 63 5F 
{3835232} normal block at 0x000001EB328C6D30, 48 bytes long.
 Data: <PATH=D:\Boinc_da> 50 41 54 48 3D 44 3A 5C 42 6F 69 6E 63 5F 64 61 
{3835221} normal block at 0x000001EB3461DCD0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835218} normal block at 0x000001EB32897410, 8 bytes long.
 Data: <   2&#235;   > 00 00 81 32 EB 01 00 00 
{3834570} normal block at 0x000001EB3461E5C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x000001EB32897320, 8 bytes long.
 Data: <&#176;&#230;Q4&#235;   > B0 E6 51 34 EB 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001EB328A1AB0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001EB32886290, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001EB328A29B0, 16 bytes long.
 Data: <XA&#138;2&#235;           > 58 41 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001EB328A2910, 16 bytes long.
 Data: <0A&#138;2&#235;           > 30 41 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EB3289C630, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001EB328A33B0, 16 bytes long.
 Data: < A&#138;2&#235;           > 08 41 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001EB328A3810, 16 bytes long.
 Data: <&#224;@&#138;2&#235;           > E0 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EB328A3360, 16 bytes long.
 Data: <&#184;@&#138;2&#235;           > B8 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001EB328A32C0, 16 bytes long.
 Data: < @&#138;2&#235;           > 90 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EB3289DDC0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001EB328A3270, 16 bytes long.
 Data: <(b 2&#235;           > 28 62 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EB3289C510, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001EB328A2A50, 16 bytes long.
 Data: < b 2&#235;           > 00 62 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EB328A2E10, 16 bytes long.
 Data: <&#216;a 2&#235;           > D8 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001EB328A3220, 16 bytes long.
 Data: <&#176;a 2&#235;           > B0 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001EB328A37C0, 16 bytes long.
 Data: < a 2&#235;           > 88 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EB328A2C30, 16 bytes long.
 Data: <`a 2&#235;           > 60 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001EB328A3770, 16 bytes long.
 Data: <8a 2&#235;           > 38 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EB3289BB50, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001EB328A3590, 16 bytes long.
 Data: < a 2&#235;           > 10 61 88 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001EB32886110, 320 bytes long.
 Data: < 5&#138;2&#235;   P&#187;&#137;2&#235;   > 90 35 8A 32 EB 01 00 00 50 BB 89 32 EB 01 00 00 
{274} normal block at 0x000001EB328A3540, 16 bytes long.
 Data: <p@&#138;2&#235;           > 70 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001EB328A2D20, 16 bytes long.
 Data: <H@&#138;2&#235;           > 48 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EB3289C4B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001EB328A2B90, 16 bytes long.
 Data: < @&#138;2&#235;           > 20 40 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001EB3289C030, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001EB328A2CD0, 16 bytes long.
 Data: <h?&#138;2&#235;           > 68 3F 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001EB328A3630, 16 bytes long.
 Data: <@?&#138;2&#235;           > 40 3F 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001EB328A3310, 16 bytes long.
 Data: < ?&#138;2&#235;           > 18 3F 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EB328A31D0, 16 bytes long.
 Data: <&#240;>&#138;2&#235;           > F0 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EB328A2FF0, 16 bytes long.
 Data: <&#200;>&#138;2&#235;           > C8 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001EB328A34F0, 16 bytes long.
 Data: <&#160;>&#138;2&#235;           > A0 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001EB328A3720, 16 bytes long.
 Data: <&#176;&#218;&#137;2&#235;           > B0 DA 89 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001EB3289DAB0, 40 bytes long.
 Data: < 7&#138;2&#235;   0m&#140;2&#235;   > 20 37 8A 32 EB 01 00 00 30 6D 8C 32 EB 01 00 00 
{260} normal block at 0x000001EB328A2FA0, 16 bytes long.
 Data: < >&#138;2&#235;           > 80 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001EB328A3180, 16 bytes long.
 Data: <X>&#138;2&#235;           > 58 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001EB3289BA30, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001EB328A2E60, 16 bytes long.
 Data: <0>&#138;2&#235;           > 30 3E 8A 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001EB328A3E30, 992 bytes long.
 Data: <`.&#138;2&#235;   0&#186;&#137;2&#235;   > 60 2E 8A 32 EB 01 00 00 30 BA 89 32 EB 01 00 00 
{92} normal block at 0x000001EB3289C870, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001EB32896F10, 16 bytes long.
 Data: < &#219;&#137;2&#235;           > 90 DB 89 32 EB 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001EB3289DB90, 40 bytes long.
 Data: < o&#137;2&#235;   p&#200;&#137;2&#235;   > 10 6F 89 32 EB 01 00 00 70 C8 89 32 EB 01 00 00 
{69} normal block at 0x000001EB32897870, 16 bytes long.
 Data: < &#234;S&#130;&#246;           > 80 EA 53 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001EB32896FB0, 16 bytes long.
 Data: <@&#233;S&#130;&#246;           > 40 E9 53 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EB32897A00, 16 bytes long.
 Data: <&#248;WP&#130;&#246;           > F8 57 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001EB32897190, 16 bytes long.
 Data: <&#216;WP&#130;&#246;           > D8 57 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EB328970A0, 16 bytes long.
 Data: <P P&#130;&#246;           > 50 04 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EB32896CE0, 16 bytes long.
 Data: <0 P&#130;&#246;           > 30 04 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001EB32896C90, 16 bytes long.
 Data: <&#224; P&#130;&#246;           > E0 02 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001EB328974B0, 16 bytes long.
 Data: <  P&#130;&#246;           > 10 04 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001EB32897960, 16 bytes long.
 Data: <p P&#130;&#246;           > 70 04 50 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001EB32897780, 16 bytes long.
 Data: < &#192;N&#130;&#246;           > 18 C0 4E 82 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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