Task 38687188

Name test_6-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND2363_0
Workunit 31628586
Created 28 Oct 2026, 6:26:44 UTC
Sent 28 Oct 2026, 6:26:46 UTC
Report deadline 2 Nov 2026, 6:26:46 UTC
Received 28 Oct 2026, 6:45:42 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 649098
Run time 18 min 32 sec
CPU time 16 min 4 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 91,065.39 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 745.98 MB
Peak swap size 19.21 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
07:27:43 (37832): wrapper (7.9.26016): starting
07:27:43 (37832): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
07:27:44 (37832): Library/usr/bin/tar.exe exited; CPU time 0.000000
07:27:44 (37832): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\9\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:45:30 (37832): C:/Windows/system32/cmd.exe exited; CPU time 964.453125
07:45:30 (37832): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 19600671 bytes.
Dumping objects ->
{3835248} normal block at 0x000001EBC99E8010, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835237} normal block at 0x000001EBC7AE4620, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835226} normal block at 0x000001EBC7AE4540, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835215} normal block at 0x000001EBC7AE4AF0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835204} normal block at 0x000001EBC7AE4A80, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835173} normal block at 0x000001EBC9997940, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835160} normal block at 0x000001EBC7ADFDB0, 8 bytes long.
 Data: <  &#171;&#199;&#235;   > 00 00 AB C7 EB 01 00 00 
{3833957} normal block at 0x000001EBC7ADFAE0, 8 bytes long.
 Data: <&#160;l&#158;&#201;&#235;   > A0 6C 9E C9 EB 01 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x000001EBC7AE0550, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001EBC7AD59B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x000001EBC7AE59F0, 16 bytes long.
 Data: < P&#174;&#199;&#235;           > 88 50 AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000001EBC7AE5CC0, 16 bytes long.
 Data: <`P&#174;&#199;&#235;           > 60 50 AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001EBC7ADE270, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x000001EBC7AE5F90, 16 bytes long.
 Data: <8P&#174;&#199;&#235;           > 38 50 AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001EBC7AE5310, 16 bytes long.
 Data: < P&#174;&#199;&#235;           > 10 50 AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001EBC7AE5EF0, 16 bytes long.
 Data: <&#232;O&#174;&#199;&#235;           > E8 4F AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000001EBC7AE5680, 16 bytes long.
 Data: <&#192;O&#174;&#199;&#235;           > C0 4F AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001EBC7AE47E0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x000001EBC7AE5EA0, 16 bytes long.
 Data: <&#216;&#135;&#173;&#199;&#235;           > D8 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001EBC7ADE690, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x000001EBC7AE5360, 16 bytes long.
 Data: <&#176;&#135;&#173;&#199;&#235;           > B0 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001EBC7AE5270, 16 bytes long.
 Data: < &#135;&#173;&#199;&#235;           > 88 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001EBC7AE54A0, 16 bytes long.
 Data: <`&#135;&#173;&#199;&#235;           > 60 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001EBC7AE59A0, 16 bytes long.
 Data: <8&#135;&#173;&#199;&#235;           > 38 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001EBC7AE5950, 16 bytes long.
 Data: < &#135;&#173;&#199;&#235;           > 10 87 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001EBC7AE5AE0, 16 bytes long.
 Data: <&#232;&#134;&#173;&#199;&#235;           > E8 86 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001EBC7ADE8D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x000001EBC7AE5A90, 16 bytes long.
 Data: <&#192;&#134;&#173;&#199;&#235;           > C0 86 AD C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001EBC7AD86C0, 320 bytes long.
 Data: < Z&#174;&#199;&#235;   &#208;&#232;&#173;&#199;&#235;   > 90 5A AE C7 EB 01 00 00 D0 E8 AD C7 EB 01 00 00 
{274} normal block at 0x000001EBC7AE5220, 16 bytes long.
 Data: <&#160;O&#174;&#199;&#235;           > A0 4F AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001EBC7AE5BD0, 16 bytes long.
 Data: <xO&#174;&#199;&#235;           > 78 4F AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001EBC7ADE870, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x000001EBC7AE5630, 16 bytes long.
 Data: <PO&#174;&#199;&#235;           > 50 4F AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001EBC7ADE810, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x000001EBC7AE58B0, 16 bytes long.
 Data: < N&#174;&#199;&#235;           > 98 4E AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001EBC7AE56D0, 16 bytes long.
 Data: <pN&#174;&#199;&#235;           > 70 4E AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001EBC7AE5E50, 16 bytes long.
 Data: <HN&#174;&#199;&#235;           > 48 4E AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001EBC7AE5E00, 16 bytes long.
 Data: < N&#174;&#199;&#235;           > 20 4E AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001EBC7AE5900, 16 bytes long.
 Data: <&#248;M&#174;&#199;&#235;           > F8 4D AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001EBC7ADF130, 16 bytes long.
 Data: <&#208;M&#174;&#199;&#235;           > D0 4D AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001EBC7ADFA90, 16 bytes long.
 Data: <&#240;C&#174;&#199;&#235;           > F0 43 AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001EBC7AE43F0, 40 bytes long.
 Data: < &#250;&#173;&#199;&#235;   @y &#201;&#235;   > 90 FA AD C7 EB 01 00 00 40 79 99 C9 EB 01 00 00 
{260} normal block at 0x000001EBC7ADF950, 16 bytes long.
 Data: <&#176;M&#174;&#199;&#235;           > B0 4D AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001EBC7ADFF90, 16 bytes long.
 Data: < M&#174;&#199;&#235;           > 88 4D AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001EBC7ADEF30, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x000001EBC7ADFF40, 16 bytes long.
 Data: <`M&#174;&#199;&#235;           > 60 4D AE C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001EBC7AE4D60, 992 bytes long.
 Data: <@&#255;&#173;&#199;&#235;   0&#239;&#173;&#199;&#235;   > 40 FF AD C7 EB 01 00 00 30 EF AD C7 EB 01 00 00 
{92} normal block at 0x000001EBC7ADE450, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x000001EBC7ADF310, 16 bytes long.
 Data: <P&#238;&#172;&#199;&#235;           > 50 EE AC C7 EB 01 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x000001EBC7ACEE50, 40 bytes long.
 Data: < &#243;&#173;&#199;&#235;   P&#228;&#173;&#199;&#235;   > 10 F3 AD C7 EB 01 00 00 50 E4 AD C7 EB 01 00 00 
{69} normal block at 0x000001EBC7ADF9F0, 16 bytes long.
 Data: < &#234;  &#246;           > 80 EA 8D 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001EBC7ADF590, 16 bytes long.
 Data: <@&#233;  &#246;           > 40 E9 8D 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001EBC7ADF9A0, 16 bytes long.
 Data: <&#248;W&#138; &#246;           > F8 57 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001EBC7ADFA40, 16 bytes long.
 Data: <&#216;W&#138; &#246;           > D8 57 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001EBC7ADF1D0, 16 bytes long.
 Data: <P &#138; &#246;           > 50 04 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001EBC7ADF4A0, 16 bytes long.
 Data: <0 &#138; &#246;           > 30 04 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001EBC7ADFD10, 16 bytes long.
 Data: <&#224; &#138; &#246;           > E0 02 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001EBC7ADFEA0, 16 bytes long.
 Data: <  &#138; &#246;           > 10 04 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001EBC7ADF860, 16 bytes long.
 Data: <p &#138; &#246;           > 70 04 8A 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001EBC7ADFB80, 16 bytes long.
 Data: < &#192;  &#246;           > 18 C0 88 0A F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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