Task 38686959

Name test_986-GPUGRID_TEST_ATM_40STEP_20261023-35-40-RND0939_0
Workunit 31628365
Created 28 Oct 2026, 5:16:45 UTC
Sent 28 Oct 2026, 5:16:48 UTC
Report deadline 2 Nov 2026, 5:16:48 UTC
Received 28 Oct 2026, 5:59:49 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 645746
Run time 42 min 20 sec
CPU time 36 min 54 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,741.16 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 695.36 MB
Peak swap size 8.37 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
01:18:10 (21956): wrapper (7.9.26016): starting
01:18:10 (21956): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
01:18:11 (21956): Library/usr/bin/tar.exe exited; CPU time 0.000000
01:18:11 (21956): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\20\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\20\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:59:17 (21956): C:/Windows/system32/cmd.exe exited; CPU time 2214.453125
01:59:17 (21956): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 40401125 bytes.
Dumping objects ->
{3835188} normal block at 0x00000000005D4ED0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835177} normal block at 0x00000000005D4DF0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835166} normal block at 0x00000000005D4D10, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835155} normal block at 0x00000000005D4BC0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835144} normal block at 0x00000000005D4A00, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835113} normal block at 0x0000000002507C70, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835100} normal block at 0x00000000005D0010, 8 bytes long.
 Data: <  W     > 00 00 57 00 00 00 00 00 
{3833951} normal block at 0x00000000005D0600, 8 bytes long.
 Data: < &#230;j     > 00 E6 6A 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x00000000005D0DA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000000005C6BD0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x00000000005D66C0, 16 bytes long.
 Data: <HY]             > 48 59 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000000005D5EF0, 16 bytes long.
 Data: < Y]             > 20 59 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000000005CF460, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x00000000005D5A90, 16 bytes long.
 Data: <&#248;X]             > F8 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000000005D64E0, 16 bytes long.
 Data: <&#208;X]             > D0 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000000005D5C70, 16 bytes long.
 Data: <&#168;X]             > A8 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000000005D6990, 16 bytes long.
 Data: < X]             > 80 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000000005D4C30, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x00000000005D6350, 16 bytes long.
 Data: <8 \             > 38 90 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000000005CEDA0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x00000000005D69E0, 16 bytes long.
 Data: <  \             > 10 90 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000000005D6440, 16 bytes long.
 Data: <&#232; \             > E8 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000000005D6120, 16 bytes long.
 Data: <&#192; \             > C0 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000000005D6530, 16 bytes long.
 Data: <  \             > 98 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000000005D6940, 16 bytes long.
 Data: <p \             > 70 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000000005D6300, 16 bytes long.
 Data: <H \             > 48 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000000005CEE60, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x00000000005D5E00, 16 bytes long.
 Data: <  \             > 20 8F 5C 00 00 00 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000000005C8F20, 320 bytes long.
 Data: < ^]     `&#238;\     > 00 5E 5D 00 00 00 00 00 60 EE 5C 00 00 00 00 00 
{271} normal block at 0x00000000005D5FE0, 16 bytes long.
 Data: <`X]             > 60 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000000005D63A0, 16 bytes long.
 Data: <8X]             > 38 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000000005CECE0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x00000000005D5E50, 16 bytes long.
 Data: < X]             > 10 58 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000000005CE860, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x00000000005D6260, 16 bytes long.
 Data: <XW]             > 58 57 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000000005D5C20, 16 bytes long.
 Data: <0W]             > 30 57 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000000005D68F0, 16 bytes long.
 Data: < W]             > 08 57 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000000005D63F0, 16 bytes long.
 Data: <&#224;V]             > E0 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000000005D01A0, 16 bytes long.
 Data: <&#184;V]             > B8 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000000005CF840, 16 bytes long.
 Data: < V]             > 90 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000000005CF8E0, 16 bytes long.
 Data: < M]             > 80 4D 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000000005D4D80, 40 bytes long.
 Data: <&#224;&#248;\     p|P     > E0 F8 5C 00 00 00 00 00 70 7C 50 02 00 00 00 00 
{257} normal block at 0x00000000005CF890, 16 bytes long.
 Data: <pV]             > 70 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000000005CFDE0, 16 bytes long.
 Data: <HV]             > 48 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x00000000005CEC20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x00000000005D06A0, 16 bytes long.
 Data: < V]             > 20 56 5D 00 00 00 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000000005D5620, 992 bytes long.
 Data: <&#160; ]      &#236;\     > A0 06 5D 00 00 00 00 00 20 EC 5C 00 00 00 00 00 
{89} normal block at 0x00000000005CF520, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x00000000005CFFC0, 16 bytes long.
 Data: < &#177;[             > 20 B1 5B 00 00 00 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x00000000005BB120, 40 bytes long.
 Data: <&#192;&#255;\      &#245;\     > C0 FF 5C 00 00 00 00 00 20 F5 5C 00 00 00 00 00 
{66} normal block at 0x00000000005CFAC0, 16 bytes long.
 Data: < &#234;&#248;&#207;&#247;           > 80 EA F8 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000000005D0100, 16 bytes long.
 Data: <@&#233;&#248;&#207;&#247;           > 40 E9 F8 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000000005CFC00, 16 bytes long.
 Data: <&#248;W&#245;&#207;&#247;           > F8 57 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000000005CFBB0, 16 bytes long.
 Data: <&#216;W&#245;&#207;&#247;           > D8 57 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000000005CFA20, 16 bytes long.
 Data: <P &#245;&#207;&#247;           > 50 04 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000000005CF930, 16 bytes long.
 Data: <0 &#245;&#207;&#247;           > 30 04 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000000005CF9D0, 16 bytes long.
 Data: <&#224; &#245;&#207;&#247;           > E0 02 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000000005D0380, 16 bytes long.
 Data: <  &#245;&#207;&#247;           > 10 04 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000000005CF7A0, 16 bytes long.
 Data: <p &#245;&#207;&#247;           > 70 04 F5 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000000005CFCA0, 16 bytes long.
 Data: < &#192;&#243;&#207;&#247;           > 18 C0 F3 CF F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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