Task 38686927

Name test_841-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND2316_0
Workunit 31628336
Created 28 Oct 2026, 5:07:59 UTC
Sent 28 Oct 2026, 5:08:01 UTC
Report deadline 2 Nov 2026, 5:08:01 UTC
Received 28 Oct 2026, 7:40:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 647670
Run time 39 min 44 sec
CPU time 37 min 31 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,117.86 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 709.03 MB
Peak swap size 6.86 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.15</core_client_version>
<![CDATA[
<stderr_txt>
08:02:10 (17524): wrapper (7.9.26016): starting
08:02:10 (17524): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:02:12 (17524): Library/usr/bin/tar.exe exited; CPU time 0.000000
08:02:12 (17524): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\18\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\18\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
08:40:24 (17524): C:/Windows/system32/cmd.exe exited; CPU time 2251.437500
08:40:24 (17524): called boinc_finish(0)
0 bytes in 0 Free Blocks.
544 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 39250519 bytes.
Dumping objects ->
{3835240} normal block at 0x0000026A02294590, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835229} normal block at 0x0000026A02294520, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835218} normal block at 0x0000026A02294210, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835207} normal block at 0x0000026A022943D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835196} normal block at 0x0000026A022942F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835165} normal block at 0x0000026A03F89D40, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x0000026A022ECB80, 144 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835151} normal block at 0x0000026A0228E700, 8 bytes long.
 Data: <  n j   > 00 00 6E 02 6A 02 00 00 
{3834552} normal block at 0x0000026A022ED540, 144 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833957} normal block at 0x0000026A0228E9D0, 8 bytes long.
 Data: <pm&#254; j   > 70 6D FE 03 6A 02 00 00 
..\zip\boinc_zip.cpp(122) : {310} normal block at 0x0000026A02290540, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000026A02285590, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{294} normal block at 0x0000026A02294B20, 16 bytes long.
 Data: <(^) j           > 28 5E 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000026A02294E40, 16 bytes long.
 Data: < ^) j           > 00 5E 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000026A0228F270, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{291} normal block at 0x0000026A02294DF0, 16 bytes long.
 Data: <&#216;]) j           > D8 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000026A02294DA0, 16 bytes long.
 Data: <&#176;]) j           > B0 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000026A022951B0, 16 bytes long.
 Data: < ]) j           > 88 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000026A02294F80, 16 bytes long.
 Data: <`]) j           > 60 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000026A02294670, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{286} normal block at 0x0000026A02294AD0, 16 bytes long.
 Data: <H&#180;' j           > 48 B4 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000026A0228FB70, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{284} normal block at 0x0000026A02295480, 16 bytes long.
 Data: < &#180;' j           > 20 B4 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000026A02294A80, 16 bytes long.
 Data: <&#248;&#179;' j           > F8 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000026A02294A30, 16 bytes long.
 Data: <&#208;&#179;' j           > D0 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x0000026A02294D00, 16 bytes long.
 Data: <&#168;&#179;' j           > A8 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000026A02295390, 16 bytes long.
 Data: < &#179;' j           > 80 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000026A02295110, 16 bytes long.
 Data: <X&#179;' j           > 58 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000026A0228FB10, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{276} normal block at 0x0000026A02294990, 16 bytes long.
 Data: <0&#179;' j           > 30 B3 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000026A0227B330, 320 bytes long.
 Data: < I) j    &#251;( j   > 90 49 29 02 6A 02 00 00 10 FB 28 02 6A 02 00 00 
{274} normal block at 0x0000026A02294C60, 16 bytes long.
 Data: <@]) j           > 40 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000026A02294F30, 16 bytes long.
 Data: < ]) j           > 18 5D 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000026A0228F990, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{271} normal block at 0x0000026A02294EE0, 16 bytes long.
 Data: <&#240;\) j           > F0 5C 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000026A0228F210, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{269} normal block at 0x0000026A02294BC0, 16 bytes long.
 Data: <8\) j           > 38 5C 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000026A022958E0, 16 bytes long.
 Data: < \) j           > 10 5C 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000026A02294E90, 16 bytes long.
 Data: <&#232;[) j           > E8 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000026A02295890, 16 bytes long.
 Data: <&#192;[) j           > C0 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000026A02294C10, 16 bytes long.
 Data: < [) j           > 98 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000026A02295340, 16 bytes long.
 Data: <p[) j           > 70 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000026A02295840, 16 bytes long.
 Data: < F) j           > 00 46 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000026A02294600, 40 bytes long.
 Data: <@X) j   @ &#248; j   > 40 58 29 02 6A 02 00 00 40 9D F8 03 6A 02 00 00 
{260} normal block at 0x0000026A02295430, 16 bytes long.
 Data: <P[) j           > 50 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000026A02294B70, 16 bytes long.
 Data: <([) j           > 28 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000026A0228F690, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{257} normal block at 0x0000026A02295160, 16 bytes long.
 Data: < [) j           > 00 5B 29 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000026A02295B00, 992 bytes long.
 Data: <`Q) j    &#246;( j   > 60 51 29 02 6A 02 00 00 90 F6 28 02 6A 02 00 00 
{92} normal block at 0x0000026A0228EE50, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{91} normal block at 0x0000026A0228DDA0, 16 bytes long.
 Data: < &#222;' j           > 80 DE 27 02 6A 02 00 00 00 00 00 00 00 00 00 00 
{90} normal block at 0x0000026A0227DE80, 40 bytes long.
 Data: <&#160;&#221;( j   P&#238;( j   > A0 DD 28 02 6A 02 00 00 50 EE 28 02 6A 02 00 00 
{69} normal block at 0x0000026A0228DCB0, 16 bytes long.
 Data: < &#234;4 &#247;           > 80 EA 34 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000026A0228EB60, 16 bytes long.
 Data: <@&#233;4 &#247;           > 40 E9 34 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000026A0228EA70, 16 bytes long.
 Data: <&#248;W1 &#247;           > F8 57 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000026A0228DC60, 16 bytes long.
 Data: <&#216;W1 &#247;           > D8 57 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000026A0228E8E0, 16 bytes long.
 Data: <P 1 &#247;           > 50 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000026A0228E520, 16 bytes long.
 Data: <0 1 &#247;           > 30 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000026A0228DDF0, 16 bytes long.
 Data: <&#224; 1 &#247;           > E0 02 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000026A0228E4D0, 16 bytes long.
 Data: <  1 &#247;           > 10 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000026A0228E430, 16 bytes long.
 Data: <p 1 &#247;           > 70 04 31 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000026A0228E890, 16 bytes long.
 Data: < &#192;/ &#247;           > 18 C0 2F 1C F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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