Task 38686781

Name test_981-GPUGRID_TEST_ATM_40STEP_20261023-28-40-RND4125_0
Workunit 31628194
Created 28 Oct 2026, 4:21:13 UTC
Sent 28 Oct 2026, 4:21:16 UTC
Report deadline 2 Nov 2026, 4:21:16 UTC
Received 28 Oct 2026, 5:22:58 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610900
Run time 1 hours 0 min 5 sec
CPU time 51 min 25 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,990.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 737.48 MB
Peak swap size 9.91 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
00:22:49 (30992): wrapper (7.9.26016): starting
00:22:49 (30992): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
00:22:50 (30992): Library/usr/bin/tar.exe exited; CPU time 0.015625
00:22:50 (30992): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
01:22:09 (30992): C:/Windows/system32/cmd.exe exited; CPU time 3085.734375
01:22:09 (30992): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 85233651 bytes.
Dumping objects ->
{3835500} normal block at 0x00000234A5DD4920, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835489} normal block at 0x00000234A5DD48B0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835478} normal block at 0x00000234A5DD4840, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835467} normal block at 0x00000234A5DD47D0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835456} normal block at 0x00000234A5DD46F0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835425} normal block at 0x00000234A7B998A0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835412} normal block at 0x00000234A5DCE7E0, 8 bytes long.
 Data: <  .&#166;4   > 00 00 2E A6 34 02 00 00 
{3833959} normal block at 0x00000234A5DCE740, 8 bytes long.
 Data: <&#176;&#223;&#170;&#167;4   > B0 DF AA A7 34 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x00000234A5DD0EE0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000234A5DC5DC0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x00000234A5DD55D0, 16 bytes long.
 Data: <(g&#221;&#165;4           > 28 67 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000234A5DD6160, 16 bytes long.
 Data: < g&#221;&#165;4           > 00 67 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000234A5DD0110, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x00000234A5DD5B20, 16 bytes long.
 Data: <&#216;f&#221;&#165;4           > D8 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000234A5DD6070, 16 bytes long.
 Data: <&#176;f&#221;&#165;4           > B0 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000234A5DD62A0, 16 bytes long.
 Data: < f&#221;&#165;4           > 88 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000234A5DD5AD0, 16 bytes long.
 Data: <`f&#221;&#165;4           > 60 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000234A5DD4C30, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x00000234A5DD5EE0, 16 bytes long.
 Data: <  &#220;&#165;4           > 18 8F DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000234A5DCFBD0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x00000234A5DD6020, 16 bytes long.
 Data: <&#240;&#142;&#220;&#165;4           > F0 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000234A5DD5D00, 16 bytes long.
 Data: <&#200;&#142;&#220;&#165;4           > C8 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000234A5DD5710, 16 bytes long.
 Data: <&#160;&#142;&#220;&#165;4           > A0 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000234A5DD5530, 16 bytes long.
 Data: <x&#142;&#220;&#165;4           > 78 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000234A5DD57B0, 16 bytes long.
 Data: <P&#142;&#220;&#165;4           > 50 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000234A5DD54E0, 16 bytes long.
 Data: <(&#142;&#220;&#165;4           > 28 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000234A5DD0170, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x00000234A5DD5760, 16 bytes long.
 Data: < &#142;&#220;&#165;4           > 00 8E DC A5 34 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000234A5DC8E00, 320 bytes long.
 Data: <`W&#221;&#165;4   p &#221;&#165;4   > 60 57 DD A5 34 02 00 00 70 01 DD A5 34 02 00 00 
{275} normal block at 0x00000234A5DD5490, 16 bytes long.
 Data: <@f&#221;&#165;4           > 40 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000234A5DD62F0, 16 bytes long.
 Data: < f&#221;&#165;4           > 18 66 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000234A5DD0050, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x00000234A5DD5440, 16 bytes long.
 Data: <&#240;e&#221;&#165;4           > F0 65 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000234A5DD0350, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x00000234A5DD59E0, 16 bytes long.
 Data: <8e&#221;&#165;4           > 38 65 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000234A5DD58F0, 16 bytes long.
 Data: < e&#221;&#165;4           > 10 65 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000234A5DD6200, 16 bytes long.
 Data: <&#232;d&#221;&#165;4           > E8 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000234A5DD6390, 16 bytes long.
 Data: <&#192;d&#221;&#165;4           > C0 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000234A5DD5A30, 16 bytes long.
 Data: < d&#221;&#165;4           > 98 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000234A5DD6110, 16 bytes long.
 Data: <pd&#221;&#165;4           > 70 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000234A5DD5E90, 16 bytes long.
 Data: <pJ&#221;&#165;4           > 70 4A DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000234A5DD4A70, 40 bytes long.
 Data: < ^&#221;&#165;4   &#160; &#185;&#167;4   > 90 5E DD A5 34 02 00 00 A0 98 B9 A7 34 02 00 00 
{261} normal block at 0x00000234A5DD5C60, 16 bytes long.
 Data: <Pd&#221;&#165;4           > 50 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000234A5DD5D50, 16 bytes long.
 Data: <(d&#221;&#165;4           > 28 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000234A5DD0590, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x00000234A5DD5850, 16 bytes long.
 Data: < d&#221;&#165;4           > 00 64 DD A5 34 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x00000234A5DD6400, 992 bytes long.
 Data: <PX&#221;&#165;4     &#221;&#165;4   > 50 58 DD A5 34 02 00 00 90 05 DD A5 34 02 00 00 
{93} normal block at 0x00000234A5DCFCF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x00000234A5DCEBF0, 16 bytes long.
 Data: <P&#227;&#219;&#165;4           > 50 E3 DB A5 34 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x00000234A5DBE350, 40 bytes long.
 Data: <&#240;&#235;&#220;&#165;4   &#240;&#252;&#220;&#165;4   > F0 EB DC A5 34 02 00 00 F0 FC DC A5 34 02 00 00 
{70} normal block at 0x00000234A5DCE8D0, 16 bytes long.
 Data: < &#234;&#203;e&#247;           > 80 EA CB 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000234A5DCF640, 16 bytes long.
 Data: <@&#233;&#203;e&#247;           > 40 E9 CB 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000234A5DCEAB0, 16 bytes long.
 Data: <&#248;W&#200;e&#247;           > F8 57 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000234A5DCEA10, 16 bytes long.
 Data: <&#216;W&#200;e&#247;           > D8 57 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000234A5DCEA60, 16 bytes long.
 Data: <P &#200;e&#247;           > 50 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000234A5DCEF60, 16 bytes long.
 Data: <0 &#200;e&#247;           > 30 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000234A5DCF1E0, 16 bytes long.
 Data: <&#224; &#200;e&#247;           > E0 02 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000234A5DCEF10, 16 bytes long.
 Data: <  &#200;e&#247;           > 10 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000234A5DCF5F0, 16 bytes long.
 Data: <p &#200;e&#247;           > 70 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000234A5DCF230, 16 bytes long.
 Data: < &#192;&#198;e&#247;           > 18 C0 C6 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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