Task 38686570

Name test_375-GPUGRID_TEST_ATM_40STEP_20261023-38-40-RND8953_0
Workunit 31628000
Created 28 Oct 2026, 3:15:47 UTC
Sent 28 Oct 2026, 3:15:50 UTC
Report deadline 2 Nov 2026, 3:15:50 UTC
Received 28 Oct 2026, 4:18:43 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 644440
Run time 59 min 32 sec
CPU time 59 min 32 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 8,090.66 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 743.28 MB
Peak swap size 12.90 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
23:17:44 (76628): wrapper (7.9.26016): starting
23:17:44 (76628): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:17:46 (76628): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:17:46 (76628): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\32\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
00:18:00 (76628): C:/Windows/system32/cmd.exe exited; CPU time 3572.203125
00:18:00 (76628): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 102605157 bytes.
Dumping objects ->
{3835512} normal block at 0x00000216AE26C740, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835501} normal block at 0x00000216AC4A9310, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835490} normal block at 0x00000216AC4A92A0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835479} normal block at 0x00000216AC4A95B0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835468} normal block at 0x00000216AC4A9230, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835437} normal block at 0x00000216AE279920, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835424} normal block at 0x00000216AC4A0A50, 8 bytes long.
 Data: <  &#167;&#172;    > 00 00 A7 AC 16 02 00 00 
{3833965} normal block at 0x00000216AC4A1090, 8 bytes long.
 Data: <`&#214;W&#172;    > 60 D6 57 AC 16 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x00000216AC498AD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x00000216AC498FA0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x00000216AC4A9DA0, 16 bytes long.
 Data: <&#216;&#171;J&#172;            > D8 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000216AC4AA110, 16 bytes long.
 Data: <&#176;&#171;J&#172;            > B0 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000216AC4A2F20, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x00000216AC4A9DF0, 16 bytes long.
 Data: < &#171;J&#172;            > 88 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000216AC4A9D00, 16 bytes long.
 Data: <`&#171;J&#172;            > 60 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000216AC4A9F30, 16 bytes long.
 Data: <8&#171;J&#172;            > 38 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000216AC4A9C10, 16 bytes long.
 Data: < &#171;J&#172;            > 10 AB 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000216AC4A93F0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x00000216AC4A9CB0, 16 bytes long.
 Data: <8 I&#172;            > 38 05 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000216AC4A2EC0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x00000216AC4AA1B0, 16 bytes long.
 Data: <  I&#172;            > 10 05 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x00000216AC4A9B70, 16 bytes long.
 Data: <&#232; I&#172;            > E8 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000216AC4A9B20, 16 bytes long.
 Data: <&#192; I&#172;            > C0 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000216AC4A9AD0, 16 bytes long.
 Data: <  I&#172;            > 98 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000216AC4AA3E0, 16 bytes long.
 Data: <p I&#172;            > 70 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000216AC4A9A80, 16 bytes long.
 Data: <H I&#172;            > 48 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000216AC4A2E00, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x00000216AC4A9990, 16 bytes long.
 Data: <  I&#172;            > 20 04 49 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000216AC490420, 320 bytes long.
 Data: <  J&#172;     .J&#172;    > 90 99 4A AC 16 02 00 00 00 2E 4A AC 16 02 00 00 
{278} normal block at 0x00000216AC4A9A30, 16 bytes long.
 Data: <&#240;&#170;J&#172;            > F0 AA 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000216AC4A9940, 16 bytes long.
 Data: <&#200;&#170;J&#172;            > C8 AA 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000216AC4A3940, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x00000216AC4AA390, 16 bytes long.
 Data: <&#160;&#170;J&#172;            > A0 AA 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000216AC4A3280, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x00000216AC4AA7A0, 16 bytes long.
 Data: <&#232;&#169;J&#172;            > E8 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000216AC4AA7F0, 16 bytes long.
 Data: <&#192;&#169;J&#172;            > C0 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000216AC4AA840, 16 bytes long.
 Data: < &#169;J&#172;            > 98 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000216AC4A9D50, 16 bytes long.
 Data: <p&#169;J&#172;            > 70 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000216AC4AA480, 16 bytes long.
 Data: <H&#169;J&#172;            > 48 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000216AC4AA0C0, 16 bytes long.
 Data: < &#169;J&#172;            > 20 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000216AC4A9FD0, 16 bytes long.
 Data: < &#147;J&#172;            > 80 93 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000216AC4A9380, 40 bytes long.
 Data: <&#208;&#159;J&#172;      '&#174;    > D0 9F 4A AC 16 02 00 00 20 99 27 AE 16 02 00 00 
{264} normal block at 0x00000216AC4A9BC0, 16 bytes long.
 Data: < &#169;J&#172;            > 00 A9 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000216AC4A9F80, 16 bytes long.
 Data: <&#216;&#168;J&#172;            > D8 A8 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000216AC4A3520, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x00000216AC4AA250, 16 bytes long.
 Data: <&#176;&#168;J&#172;            > B0 A8 4A AC 16 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000216AC4AA8B0, 992 bytes long.
 Data: <P&#162;J&#172;     5J&#172;    > 50 A2 4A AC 16 02 00 00 20 35 4A AC 16 02 00 00 
{96} normal block at 0x00000216AC4A33A0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x00000216AC4A0D70, 16 bytes long.
 Data: < &#226;H&#172;            > 00 E2 48 AC 16 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x00000216AC48E200, 40 bytes long.
 Data: <p J&#172;    &#160;3J&#172;    > 70 0D 4A AC 16 02 00 00 A0 33 4A AC 16 02 00 00 
{73} normal block at 0x00000216AC4A1310, 16 bytes long.
 Data: < &#234;&#253;&#225;&#246;           > 80 EA FD E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x00000216AC4A0960, 16 bytes long.
 Data: <@&#233;&#253;&#225;&#246;           > 40 E9 FD E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000216AC4A0BE0, 16 bytes long.
 Data: <&#248;W&#250;&#225;&#246;           > F8 57 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000216AC4A0FF0, 16 bytes long.
 Data: <&#216;W&#250;&#225;&#246;           > D8 57 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000216AC4A0EB0, 16 bytes long.
 Data: <P &#250;&#225;&#246;           > 50 04 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000216AC4A07D0, 16 bytes long.
 Data: <0 &#250;&#225;&#246;           > 30 04 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000216AC4A0F00, 16 bytes long.
 Data: <&#224; &#250;&#225;&#246;           > E0 02 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000216AC4A1450, 16 bytes long.
 Data: <  &#250;&#225;&#246;           > 10 04 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000216AC4A0CD0, 16 bytes long.
 Data: <p &#250;&#225;&#246;           > 70 04 FA E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000216AC4A16D0, 16 bytes long.
 Data: < &#192;&#248;&#225;&#246;           > 18 C0 F8 E1 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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