Task 38686464
| Name | test_541-GPUGRID_TEST_ATM_40STEP_20261023-28-40-RND8000_0 |
| Workunit | 31627896 |
| Created | 28 Oct 2026, 2:41:36 UTC |
| Sent | 28 Oct 2026, 2:41:40 UTC |
| Report deadline | 2 Nov 2026, 2:41:40 UTC |
| Received | 28 Oct 2026, 4:09:06 UTC |
| Server state | Over |
| Outcome | Success |
| Client state | Done |
| Exit status | 0 (0x00000000) |
| Computer ID | 628087 |
| Run time | 1 hours 19 min 41 sec |
| CPU time | 1 hours 19 min 41 sec |
| Validate state | Valid |
| Credit | 60,000.00 |
| Device peak FLOPS | 5,809.69 GFLOPS |
| Application version | ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121) windows_x86_64 |
| Peak working set size | 770.21 MB |
| Peak swap size | 12.94 GB |
| Peak disk usage | 3.03 GB |
Stderr output
<core_client_version>7.16.20</core_client_version>
<![CDATA[
<stderr_txt>
10:45:04 (61344): wrapper (7.9.26016): starting
10:45:04 (61344): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
10:45:06 (61344): Library/usr/bin/tar.exe exited; CPU time 0.000000
10:45:06 (61344): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
WARNING: Retrying (Retry(total=4, connect=None, read=None, redirect=None, status=None)) after connection broken by 'SSLError(SSLEOFError(8, '[SSL: UNEXPECTED_EOF_WHILE_READING] EOF occurred in violation of protocol (_ssl.c:1006)'))': /simple/pyaml/
WARNING: The script pyaml.exe is installed in 'D:\BOINCPROJECT\slots\9\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'D:\BOINCPROJECT\slots\9\Scripts' which is not on PATH.
Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated. Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:06:57 (61344): C:/Windows/system32/cmd.exe exited; CPU time 4781.609375
12:06:57 (61344): called boinc_finish(0)
0 bytes in 0 Free Blocks.
176 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 151967969 bytes.
Dumping objects ->
{3835668} normal block at 0x000001C947D94040, 48 bytes long.
Data: <PATH=D:\BOINCPRO> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 50 52 4F
{3835657} normal block at 0x000001C949D31FE0, 32 bytes long.
Data: <HOME=D:\BOINCPRO> 48 4F 4D 45 3D 44 3A 5C 42 4F 49 4E 43 50 52 4F
{3835646} normal block at 0x000001C949D32FA0, 32 bytes long.
Data: <TMP=D:\BOINCPROJ> 54 4D 50 3D 44 3A 5C 42 4F 49 4E 43 50 52 4F 4A
{3835635} normal block at 0x000001C949D32AC0, 32 bytes long.
Data: <TEMP=D:\BOINCPRO> 54 45 4D 50 3D 44 3A 5C 42 4F 49 4E 43 50 52 4F
{3835624} normal block at 0x000001C949D32580, 32 bytes long.
Data: <TMPDIR=D:\BOINCP> 54 4D 50 44 49 52 3D 44 3A 5C 42 4F 49 4E 43 50
{3835593} normal block at 0x000001C947D94580, 48 bytes long.
Data: <PATH=D:\BOINCPRO> 50 41 54 48 3D 44 3A 5C 42 4F 49 4E 43 50 52 4F
..\api\boinc_api.cpp(309) : {3835580} normal block at 0x000001C947CC2D50, 8 bytes long.
Data: < !H > 00 00 21 48 C9 01 00 00
{3834085} normal block at 0x000001C947CC25D0, 8 bytes long.
Data: < G > 00 E6 CA 47 C9 01 00 00
..\zip\boinc_zip.cpp(122) : {319} normal block at 0x000001C947CC10E0, 260 bytes long.
Data: < > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00
{304} normal block at 0x000001C947CB1AE0, 80 bytes long.
Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C
{303} normal block at 0x000001C947CC88D0, 16 bytes long.
Data: <( G > 28 83 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{302} normal block at 0x000001C947CC87E0, 16 bytes long.
Data: < G > 00 83 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{301} normal block at 0x000001C947CBF8F0, 32 bytes long.
Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D
{300} normal block at 0x000001C947CC8DD0, 16 bytes long.
Data: < G > D8 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{299} normal block at 0x000001C947CC9230, 16 bytes long.
Data: < G > B0 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{298} normal block at 0x000001C947CC8B50, 16 bytes long.
Data: < G > 88 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{297} normal block at 0x000001C947CC8F10, 16 bytes long.
Data: <` G > 60 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{296} normal block at 0x000001C947CC63D0, 48 bytes long.
Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F
{295} normal block at 0x000001C947CC91E0, 16 bytes long.
Data: < | G > 08 7C CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{294} normal block at 0x000001C947CC0010, 32 bytes long.
Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69
{293} normal block at 0x000001C947CC8650, 16 bytes long.
Data: < { G > E0 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{291} normal block at 0x000001C947CC8AB0, 16 bytes long.
Data: < { G > B8 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{290} normal block at 0x000001C947CC8A10, 16 bytes long.
Data: < { G > 90 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{289} normal block at 0x000001C947CC8790, 16 bytes long.
Data: <h{ G > 68 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{288} normal block at 0x000001C947CC8A60, 16 bytes long.
Data: <@{ G > 40 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{287} normal block at 0x000001C947CC8E20, 16 bytes long.
Data: < { G > 18 7B CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{286} normal block at 0x000001C947CBF530, 32 bytes long.
Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55
{285} normal block at 0x000001C947CC90F0, 16 bytes long.
Data: < z G > F0 7A CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{284} normal block at 0x000001C947CC7AF0, 320 bytes long.
Data: < G 0 G > F0 90 CC 47 C9 01 00 00 30 F5 CB 47 C9 01 00 00
{283} normal block at 0x000001C947CC8740, 16 bytes long.
Data: <@ G > 40 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{282} normal block at 0x000001C947CC8600, 16 bytes long.
Data: < G > 18 82 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{281} normal block at 0x000001C947CBFDD0, 32 bytes long.
Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65
{280} normal block at 0x000001C947CC9320, 16 bytes long.
Data: < G > F0 81 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{279} normal block at 0x000001C947CBF890, 32 bytes long.
Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62
{278} normal block at 0x000001C947CC92D0, 16 bytes long.
Data: <8 G > 38 81 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{277} normal block at 0x000001C947CC8920, 16 bytes long.
Data: < G > 10 81 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{276} normal block at 0x000001C947CC8BA0, 16 bytes long.
Data: < G > E8 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{275} normal block at 0x000001C947CC9050, 16 bytes long.
Data: < G > C0 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{274} normal block at 0x000001C947CC9140, 16 bytes long.
Data: < G > 98 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{273} normal block at 0x000001C947CC2A30, 16 bytes long.
Data: <p G > 70 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{271} normal block at 0x000001C947CC2350, 16 bytes long.
Data: < i G > F0 69 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{270} normal block at 0x000001C947CC69F0, 40 bytes long.
Data: <P# G E G > 50 23 CC 47 C9 01 00 00 80 45 D9 47 C9 01 00 00
{269} normal block at 0x000001C947CC28A0, 16 bytes long.
Data: <P G > 50 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{268} normal block at 0x000001C947CC2580, 16 bytes long.
Data: <( G > 28 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{267} normal block at 0x000001C947CBF9B0, 32 bytes long.
Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F
{266} normal block at 0x000001C947CC2260, 16 bytes long.
Data: < G > 00 80 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{265} normal block at 0x000001C947CC8000, 992 bytes long.
Data: <`" G G > 60 22 CC 47 C9 01 00 00 B0 F9 CB 47 C9 01 00 00
{101} normal block at 0x000001C947CBFFB0, 32 bytes long.
Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F
{100} normal block at 0x000001C947CC2DA0, 16 bytes long.
Data: < f G > E0 66 CC 47 C9 01 00 00 00 00 00 00 00 00 00 00
{99} normal block at 0x000001C947CC66E0, 40 bytes long.
Data: < - G G > A0 2D CC 47 C9 01 00 00 B0 FF CB 47 C9 01 00 00
{76} normal block at 0x000001C947CC2030, 16 bytes long.
Data: < > 80 EA 19 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{75} normal block at 0x000001C947CC29E0, 16 bytes long.
Data: <@ > 40 E9 19 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{74} normal block at 0x000001C947CC2300, 16 bytes long.
Data: < W > F8 57 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{73} normal block at 0x000001C947CC2120, 16 bytes long.
Data: < W > D8 57 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{72} normal block at 0x000001C947CC2850, 16 bytes long.
Data: <P > 50 04 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{71} normal block at 0x000001C947CC24E0, 16 bytes long.
Data: <0 > 30 04 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{70} normal block at 0x000001C947CC2490, 16 bytes long.
Data: < > E0 02 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{69} normal block at 0x000001C947CC1FE0, 16 bytes long.
Data: < > 10 04 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{68} normal block at 0x000001C947CC2440, 16 bytes long.
Data: <p > 70 04 16 FB F7 7F 00 00 00 00 00 00 00 00 00 00
{67} normal block at 0x000001C947CC2B20, 16 bytes long.
Data: < > 18 C0 14 FB F7 7F 00 00 00 00 00 00 00 00 00 00
Object dump complete.
</stderr_txt>
]]>
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