Task 38686448

Name test_287-GPUGRID_TEST_ATM_40STEP_20261023-30-40-RND9350_0
Workunit 31627880
Created 28 Oct 2026, 2:33:15 UTC
Sent 28 Oct 2026, 2:33:20 UTC
Report deadline 2 Nov 2026, 2:33:20 UTC
Received 28 Oct 2026, 4:45:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 654622
Run time 53 min 44 sec
CPU time 39 min 30 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 12,353.06 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 705.96 MB
Peak swap size 6.86 GB
Peak disk usage 4.20 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
11:10:03 (26256): wrapper (7.9.26016): starting
11:10:03 (26256): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
11:10:05 (26256): Library/usr/bin/tar.exe exited; CPU time 0.000000
11:10:05 (26256): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\16\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
12:01:57 (26256): C:/Windows/system32/cmd.exe exited; CPU time 2370.906250
12:01:57 (26256): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 64730799 bytes.
Dumping objects ->
{3835293} normal block at 0x000002630A33C960, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835282} normal block at 0x000002630A33C8F0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835271} normal block at 0x00000263082B4CD0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835260} normal block at 0x00000263082B4C60, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835249} normal block at 0x00000263082B4BF0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835218} normal block at 0x000002630A389B00, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835205} normal block at 0x00000263082AFAF0, 8 bytes long.
 Data: <  x c   > 00 00 78 08 63 02 00 00 
{3834057} normal block at 0x00000263082AF9B0, 8 bytes long.
 Data: < IA c   > C0 49 41 0A 63 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000263082B1280, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000263082A67F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000263082B5F10, 16 bytes long.
 Data: < i+ c           > 88 69 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000263082B5A10, 16 bytes long.
 Data: <`i+ c           > 60 69 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000263082AF1E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000263082B6460, 16 bytes long.
 Data: <8i+ c           > 38 69 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000263082B5D80, 16 bytes long.
 Data: < i+ c           > 10 69 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000263082B5EC0, 16 bytes long.
 Data: < h+ c           > E8 68 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000263082B5DD0, 16 bytes long.
 Data: < h+ c           > C0 68 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000263082B4F00, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000263082B60A0, 16 bytes long.
 Data: <8 ) c           > 38 E8 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000263082AF780, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000263082B6370, 16 bytes long.
 Data: <  ) c           > 10 E8 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000263082B6280, 16 bytes long.
 Data: <  ) c           > E8 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000263082B5D30, 16 bytes long.
 Data: <  ) c           > C0 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000263082B5C90, 16 bytes long.
 Data: <  ) c           > 98 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000263082B5880, 16 bytes long.
 Data: <p ) c           > 70 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000263082B5BF0, 16 bytes long.
 Data: <H ) c           > 48 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000263082AECA0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000263082B6320, 16 bytes long.
 Data: <  ) c           > 20 E7 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002630829E720, 320 bytes long.
 Data: < c+ c     * c   > 20 63 2B 08 63 02 00 00 A0 EC 2A 08 63 02 00 00 
{276} normal block at 0x00000263082B64B0, 16 bytes long.
 Data: < h+ c           > A0 68 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000263082B6230, 16 bytes long.
 Data: <xh+ c           > 78 68 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000263082AF600, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000263082B62D0, 16 bytes long.
 Data: <Ph+ c           > 50 68 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000263082AF2A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000263082B6550, 16 bytes long.
 Data: < g+ c           > 98 67 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000263082B5CE0, 16 bytes long.
 Data: <pg+ c           > 70 67 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000263082B6140, 16 bytes long.
 Data: <Hg+ c           > 48 67 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000263082B57E0, 16 bytes long.
 Data: < g+ c           > 20 67 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000263082B5740, 16 bytes long.
 Data: < f+ c           > F8 66 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000263082B5970, 16 bytes long.
 Data: < f+ c           > D0 66 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000263082B61E0, 16 bytes long.
 Data: < N+ c           > 90 4E 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000263082B4E90, 40 bytes long.
 Data: < a+ c     8 c   > E0 61 2B 08 63 02 00 00 00 9B 38 0A 63 02 00 00 
{262} normal block at 0x00000263082B63C0, 16 bytes long.
 Data: < f+ c           > B0 66 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000263082B5BA0, 16 bytes long.
 Data: < f+ c           > 88 66 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000263082AEB20, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000263082B6050, 16 bytes long.
 Data: <`f+ c           > 60 66 2B 08 63 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000263082B6660, 992 bytes long.
 Data: <P`+ c     * c   > 50 60 2B 08 63 02 00 00 20 EB 2A 08 63 02 00 00 
{94} normal block at 0x00000263082AEBE0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000263082AFEB0, 16 bytes long.
 Data: <@ ) c           > 40 D5 29 08 63 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000002630829D540, 40 bytes long.
 Data: <  * c     * c   > B0 FE 2A 08 63 02 00 00 E0 EB 2A 08 63 02 00 00 
{69} normal block at 0x00000263082B0590, 16 bytes long.
 Data: <  mt            > 80 EA 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000263082AFE60, 16 bytes long.
 Data: <@ mt            > 40 E9 6D 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000263082AFE10, 16 bytes long.
 Data: < Wjt            > F8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000263082B04A0, 16 bytes long.
 Data: < Wjt            > D8 57 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000263082AFF00, 16 bytes long.
 Data: <P jt            > 50 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000263082B00E0, 16 bytes long.
 Data: <0 jt            > 30 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000263082B0540, 16 bytes long.
 Data: <  jt            > E0 02 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000263082AFDC0, 16 bytes long.
 Data: <  jt            > 10 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000263082B0900, 16 bytes long.
 Data: <p jt            > 70 04 6A 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000263082B0040, 16 bytes long.
 Data: <  ht            > 18 C0 68 74 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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