Task 38686314

Name test_857-GPUGRID_TEST_ATM_40STEP_20261023-18-40-RND5272_0
Workunit 31627749
Created 28 Oct 2026, 1:54:16 UTC
Sent 28 Oct 2026, 1:54:21 UTC
Report deadline 2 Nov 2026, 1:54:21 UTC
Received 28 Oct 2026, 3:15:13 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 495923
Run time 20 min 16 sec
CPU time 19 min 13 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 31,792.68 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 740.42 MB
Peak swap size 9.95 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
21:55:25 (56312): wrapper (7.9.26016): starting
21:55:25 (56312): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:55:26 (56312): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:55:26 (56312): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:14:49 (56312): C:/Windows/system32/cmd.exe exited; CPU time 1153.562500
22:14:49 (56312): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 29529837 bytes.
Dumping objects ->
{3835236} normal block at 0x0000014A64240DF0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835225} normal block at 0x0000014A64240840, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835214} normal block at 0x0000014A64241170, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835203} normal block at 0x0000014A64241020, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835192} normal block at 0x0000014A642413A0, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835161} normal block at 0x0000014A64338740, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835150} normal block at 0x0000014A6434FA80, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835147} normal block at 0x0000014A6266DC10, 8 bytes long.
 Data: <  cbJ   > 00 00 63 62 4A 01 00 00 
{3834547} normal block at 0x0000014A6434FD40, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833969} normal block at 0x0000014A6266DEE0, 8 bytes long.
 Data: <&#208;F<dJ   > D0 46 3C 64 4A 01 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000014A626721D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{301} normal block at 0x0000014A626633F0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x0000014A62676910, 16 bytes long.
 Data: <XqgbJ           > 58 71 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000014A62675F60, 16 bytes long.
 Data: <0qgbJ           > 30 71 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000014A6266F7B0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000014A626768C0, 16 bytes long.
 Data: < qgbJ           > 08 71 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000014A626761E0, 16 bytes long.
 Data: <&#224;pgbJ           > E0 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000014A626762D0, 16 bytes long.
 Data: <&#184;pgbJ           > B8 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000014A62676370, 16 bytes long.
 Data: < pgbJ           > 90 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000014A62670B60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000014A62675F10, 16 bytes long.
 Data: <&#168;&#245;fbJ           > A8 F5 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000014A6266F750, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000014A62676DC0, 16 bytes long.
 Data: < &#245;fbJ           > 80 F5 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000014A62676140, 16 bytes long.
 Data: <X&#245;fbJ           > 58 F5 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000014A626763C0, 16 bytes long.
 Data: <0&#245;fbJ           > 30 F5 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000014A62675FB0, 16 bytes long.
 Data: < &#245;fbJ           > 08 F5 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000014A62676870, 16 bytes long.
 Data: <&#224;&#244;fbJ           > E0 F4 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000014A62675EC0, 16 bytes long.
 Data: <&#184;&#244;fbJ           > B8 F4 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000014A626704D0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000014A62676D70, 16 bytes long.
 Data: < &#244;fbJ           > 90 F4 66 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000014A6266F490, 320 bytes long.
 Data: <pmgbJ   &#208; gbJ   > 70 6D 67 62 4A 01 00 00 D0 04 67 62 4A 01 00 00 
{280} normal block at 0x0000014A62676820, 16 bytes long.
 Data: <ppgbJ           > 70 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000014A62676780, 16 bytes long.
 Data: <HpgbJ           > 48 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000014A6266FDB0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000014A62676AA0, 16 bytes long.
 Data: < pgbJ           > 20 70 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000014A6266F930, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000014A626766E0, 16 bytes long.
 Data: <hogbJ           > 68 6F 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000014A62676A50, 16 bytes long.
 Data: <@ogbJ           > 40 6F 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000014A62676690, 16 bytes long.
 Data: < ogbJ           > 18 6F 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000014A626765F0, 16 bytes long.
 Data: <&#240;ngbJ           > F0 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000014A62676460, 16 bytes long.
 Data: <&#200;ngbJ           > C8 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000014A62675E70, 16 bytes long.
 Data: <&#160;ngbJ           > A0 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000014A62676A00, 16 bytes long.
 Data: <&#240; gbJ           > F0 0A 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000014A62670AF0, 40 bytes long.
 Data: < jgbJ   @&#135;3dJ   > 00 6A 67 62 4A 01 00 00 40 87 33 64 4A 01 00 00 
{266} normal block at 0x0000014A62676280, 16 bytes long.
 Data: < ngbJ           > 80 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000014A62676640, 16 bytes long.
 Data: <XngbJ           > 58 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000014A6266FD50, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000014A626767D0, 16 bytes long.
 Data: <0ngbJ           > 30 6E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000014A62676E30, 992 bytes long.
 Data: <&#208;ggbJ   P&#253;fbJ   > D0 67 67 62 4A 01 00 00 50 FD 66 62 4A 01 00 00 
{98} normal block at 0x0000014A6266F6F0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x0000014A6266E5C0, 16 bytes long.
 Data: <  gbJ           > 00 0E 67 62 4A 01 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x0000014A62670E00, 40 bytes long.
 Data: <&#192;&#229;fbJ   &#240;&#246;fbJ   > C0 E5 66 62 4A 01 00 00 F0 F6 66 62 4A 01 00 00 
{75} normal block at 0x0000014A6266E2A0, 16 bytes long.
 Data: < &#234;&#162;&#229;&#246;           > 80 EA A2 E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x0000014A6266E160, 16 bytes long.
 Data: <@&#233;&#162;&#229;&#246;           > 40 E9 A2 E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x0000014A6266DAD0, 16 bytes long.
 Data: <&#248;W&#159;&#229;&#246;           > F8 57 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000014A6266D990, 16 bytes long.
 Data: <&#216;W&#159;&#229;&#246;           > D8 57 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000014A6266DCB0, 16 bytes long.
 Data: <P &#159;&#229;&#246;           > 50 04 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000014A6266DE90, 16 bytes long.
 Data: <0 &#159;&#229;&#246;           > 30 04 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000014A6266DB20, 16 bytes long.
 Data: <&#224; &#159;&#229;&#246;           > E0 02 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000014A6266DC60, 16 bytes long.
 Data: <  &#159;&#229;&#246;           > 10 04 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000014A6266DF30, 16 bytes long.
 Data: <p &#159;&#229;&#246;           > 70 04 9F E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000014A6266E570, 16 bytes long.
 Data: < &#192; &#229;&#246;           > 18 C0 9D E5 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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