Task 38686294

Name test_176-GPUGRID_TEST_ATM_40STEP_20261023-15-40-RND7215_0
Workunit 31627730
Created 28 Oct 2026, 1:46:00 UTC
Sent 28 Oct 2026, 1:46:04 UTC
Report deadline 2 Nov 2026, 1:46:04 UTC
Received 28 Oct 2026, 4:06:11 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 496592
Run time 43 min 56 sec
CPU time 42 min 54 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,334.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 670.82 MB
Peak swap size 3.76 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
04:16:52 (13604): wrapper (7.9.26016): starting
04:16:52 (13604): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
04:16:54 (13604): Library/usr/bin/tar.exe exited; CPU time 0.000000
04:16:54 (13604): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:00:55 (13604): C:/Windows/system32/cmd.exe exited; CPU time 2574.250000
05:00:55 (13604): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36666647 bytes.
Dumping objects ->
{3835361} normal block at 0x0000020EE61E1410, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835350} normal block at 0x0000020EE61E0F40, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835339} normal block at 0x0000020EE61E0C30, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835328} normal block at 0x0000020EE61E1020, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835317} normal block at 0x0000020EE61E1330, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835286} normal block at 0x0000020EE62D5240, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x0000020EE481D940, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835272} normal block at 0x0000020EE47B8990, 8 bytes long.
 Data: <  ?&#230;    > 00 00 3F E6 0E 02 00 00 
{3834603} normal block at 0x0000020EE481DFC0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x0000020EE47B8490, 8 bytes long.
 Data: <&#192;.3&#230;    > C0 2E 33 E6 0E 02 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x0000020EE47C3BA0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000020EE47AEA70, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x0000020EE47C4E10, 16 bytes long.
 Data: < _|&#228;            > 18 5F 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x0000020EE47C4D70, 16 bytes long.
 Data: <&#240;^|&#228;            > F0 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000020EE47BC8A0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x0000020EE47C52C0, 16 bytes long.
 Data: <&#200;^|&#228;            > C8 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000020EE47C5680, 16 bytes long.
 Data: <&#160;^|&#228;            > A0 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000020EE47C5090, 16 bytes long.
 Data: <x^|&#228;            > 78 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000020EE47C5A40, 16 bytes long.
 Data: <P^|&#228;            > 50 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000020EE47BEB60, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x0000020EE47C59F0, 16 bytes long.
 Data: <&#184;_z&#228;            > B8 5F 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000020EE47BD440, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x0000020EE47C5950, 16 bytes long.
 Data: < _z&#228;            > 90 5F 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000020EE47C53B0, 16 bytes long.
 Data: <h_z&#228;            > 68 5F 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x0000020EE47C4D20, 16 bytes long.
 Data: <@_z&#228;            > 40 5F 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000020EE47C5720, 16 bytes long.
 Data: < _z&#228;            > 18 5F 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000020EE47C5220, 16 bytes long.
 Data: <&#240;^z&#228;            > F0 5E 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000020EE47C5B30, 16 bytes long.
 Data: <&#200;^z&#228;            > C8 5E 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000020EE47BCBA0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x0000020EE47C5040, 16 bytes long.
 Data: <&#160;^z&#228;            > A0 5E 7A E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000020EE47A5EA0, 320 bytes long.
 Data: <@P|&#228;    &#160;&#203;{&#228;    > 40 50 7C E4 0E 02 00 00 A0 CB 7B E4 0E 02 00 00 
{271} normal block at 0x0000020EE47C5AE0, 16 bytes long.
 Data: <0^|&#228;            > 30 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000020EE47C4FF0, 16 bytes long.
 Data: < ^|&#228;            > 08 5E 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000020EE47BD620, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x0000020EE47C5630, 16 bytes long.
 Data: <&#224;]|&#228;            > E0 5D 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000020EE47BCF60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x0000020EE47C4CD0, 16 bytes long.
 Data: <(]|&#228;            > 28 5D 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000020EE47C4FA0, 16 bytes long.
 Data: < ]|&#228;            > 00 5D 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000020EE47C56D0, 16 bytes long.
 Data: <&#216;\|&#228;            > D8 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000020EE47C5A90, 16 bytes long.
 Data: <&#176;\|&#228;            > B0 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000020EE47C57C0, 16 bytes long.
 Data: < \|&#228;            > 88 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000020EE47C4C80, 16 bytes long.
 Data: <`\|&#228;            > 60 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000020EE47C4C30, 16 bytes long.
 Data: <`&#228;{&#228;            > 60 E4 7B E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000020EE47BE460, 40 bytes long.
 Data: <0L|&#228;    @R-&#230;    > 30 4C 7C E4 0E 02 00 00 40 52 2D E6 0E 02 00 00 
{257} normal block at 0x0000020EE47C5B80, 16 bytes long.
 Data: <@\|&#228;            > 40 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000020EE47C4F00, 16 bytes long.
 Data: < \|&#228;            > 18 5C 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000020EE47BD5C0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x0000020EE47C5860, 16 bytes long.
 Data: <&#240;[|&#228;            > F0 5B 7C E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000020EE47C5BF0, 992 bytes long.
 Data: <`X|&#228;    &#192;&#213;{&#228;    > 60 58 7C E4 0E 02 00 00 C0 D5 7B E4 0E 02 00 00 
{89} normal block at 0x0000020EE47BD380, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x0000020EE47B83A0, 16 bytes long.
 Data: <p&#231;{&#228;            > 70 E7 7B E4 0E 02 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x0000020EE47BE770, 40 bytes long.
 Data: <&#160;&#131;{&#228;     &#211;{&#228;    > A0 83 7B E4 0E 02 00 00 80 D3 7B E4 0E 02 00 00 
{66} normal block at 0x0000020EE47B8210, 16 bytes long.
 Data: < &#234;&&#183;&#246;           > 80 EA 26 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000020EE47B8D00, 16 bytes long.
 Data: <@&#233;&&#183;&#246;           > 40 E9 26 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000020EE47B85D0, 16 bytes long.
 Data: <&#248;W#&#183;&#246;           > F8 57 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x0000020EE47B8BC0, 16 bytes long.
 Data: <&#216;W#&#183;&#246;           > D8 57 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000020EE47B8CB0, 16 bytes long.
 Data: <P #&#183;&#246;           > 50 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000020EE47B88F0, 16 bytes long.
 Data: <0 #&#183;&#246;           > 30 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000020EE47B8710, 16 bytes long.
 Data: <&#224; #&#183;&#246;           > E0 02 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000020EE47B8DA0, 16 bytes long.
 Data: <  #&#183;&#246;           > 10 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000020EE47B8170, 16 bytes long.
 Data: <p #&#183;&#246;           > 70 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000020EE47B87B0, 16 bytes long.
 Data: < &#192;!&#183;&#246;           > 18 C0 21 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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