Task 38685914

Name test_293-GPUGRID_TEST_ATM_40STEP_20261023-35-40-RND4941_0
Workunit 31627367
Created 27 Oct 2026, 23:37:50 UTC
Sent 27 Oct 2026, 23:37:58 UTC
Report deadline 1 Nov 2026, 23:37:58 UTC
Received 28 Oct 2026, 0:31:31 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 631520
Run time 35 min 23 sec
CPU time 32 min 59 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,608.41 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 700.38 MB
Peak swap size 5.25 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
08:45:35 (896): wrapper (7.9.26016): starting
08:45:35 (896): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
08:45:36 (896): Library/usr/bin/tar.exe exited; CPU time 0.000000
08:45:36 (896): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
09:19:37 (896): C:/Windows/system32/cmd.exe exited; CPU time 1979.937500
09:19:37 (896): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 37536853 bytes.
Dumping objects ->
{3835268} normal block at 0x000002744DADBE30, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835257} normal block at 0x000002744BBA4C70, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835246} normal block at 0x000002744BBA4AB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835235} normal block at 0x000002744BBA4960, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835224} normal block at 0x000002744BBA4A40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835193} normal block at 0x000002744DB24A30, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835180} normal block at 0x000002744BBA0B80, 8 bytes long.
 Data: <   Lt   > 00 00 0F 4C 74 02 00 00 
{3834037} normal block at 0x000002744BBA0D60, 8 bytes long.
 Data: <&#176; jMt   > B0 E3 6A 4D 74 02 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000002744BB969D0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000002744BB96CB0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000002744BBA54C0, 16 bytes long.
 Data: <&#216;d&#186;Kt           > D8 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002744BBA5B50, 16 bytes long.
 Data: <&#176;d&#186;Kt           > B0 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002744BB9FBD0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000002744BBA5D80, 16 bytes long.
 Data: < d&#186;Kt           > 88 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002744BBA5970, 16 bytes long.
 Data: <`d&#186;Kt           > 60 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002744BBA60A0, 16 bytes long.
 Data: <8d&#186;Kt           > 38 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000002744BBA5920, 16 bytes long.
 Data: < d&#186;Kt           > 10 64 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002744BBA4880, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000002744BBA5C90, 16 bytes long.
 Data: <  &#184;Kt           > E8 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002744BB9FB10, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000002744BBA5E70, 16 bytes long.
 Data: <&#192; &#184;Kt           > C0 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002744BBA5790, 16 bytes long.
 Data: <  &#184;Kt           > 98 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002744BBA6000, 16 bytes long.
 Data: <p &#184;Kt           > 70 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000002744BBA5BA0, 16 bytes long.
 Data: <H &#184;Kt           > 48 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002744BBA5FB0, 16 bytes long.
 Data: <  &#184;Kt           > 20 EF B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002744BBA5C40, 16 bytes long.
 Data: <  &#184;Kt           > F8 EE B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002744BB9FD50, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000002744BBA58D0, 16 bytes long.
 Data: <&#208; &#184;Kt           > D0 EE B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002744BB8EED0, 320 bytes long.
 Data: <&#208;X&#186;Kt   P &#185;Kt   > D0 58 BA 4B 74 02 00 00 50 FD B9 4B 74 02 00 00 
{271} normal block at 0x000002744BBA5240, 16 bytes long.
 Data: < c&#186;Kt           > F0 63 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000002744BBA5AB0, 16 bytes long.
 Data: <&#200;c&#186;Kt           > C8 63 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002744BB9F5D0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000002744BBA5740, 16 bytes long.
 Data: < c&#186;Kt           > A0 63 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002744BB9F870, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000002744BBA6050, 16 bytes long.
 Data: < b&#186;Kt           > E8 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002744BBA56F0, 16 bytes long.
 Data: <&#192;b&#186;Kt           > C0 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002744BBA5290, 16 bytes long.
 Data: < b&#186;Kt           > 98 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002744BBA5D30, 16 bytes long.
 Data: <pb&#186;Kt           > 70 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002744BBA51F0, 16 bytes long.
 Data: <Hb&#186;Kt           > 48 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002744BBA5CE0, 16 bytes long.
 Data: < b&#186;Kt           > 20 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002744BBA5380, 16 bytes long.
 Data: < K&#186;Kt           > 20 4B BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002744BBA4B20, 40 bytes long.
 Data: < S&#186;Kt   0J&#178;Mt   > 80 53 BA 4B 74 02 00 00 30 4A B2 4D 74 02 00 00 
{257} normal block at 0x000002744BBA5880, 16 bytes long.
 Data: < b&#186;Kt           > 00 62 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002744BBA53D0, 16 bytes long.
 Data: <&#216;a&#186;Kt           > D8 61 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002744BB9F690, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000002744BBA60F0, 16 bytes long.
 Data: <&#176;a&#186;Kt           > B0 61 BA 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002744BBA61B0, 992 bytes long.
 Data: < `&#186;Kt     &#185;Kt   > F0 60 BA 4B 74 02 00 00 90 F6 B9 4B 74 02 00 00 
{89} normal block at 0x000002744BB9FCF0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000002744BBA0900, 16 bytes long.
 Data: <&#208;&#212;&#184;Kt           > D0 D4 B8 4B 74 02 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000002744BB8D4D0, 40 bytes long.
 Data: < 	&#186;Kt     &#185;Kt   > 00 09 BA 4B 74 02 00 00 F0 FC B9 4B 74 02 00 00 
{64} normal block at 0x000002744BBA08B0, 16 bytes long.
 Data: <  f             > 80 EA 66 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002744BBA0EF0, 16 bytes long.
 Data: <@ f             > 40 E9 66 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002744BBA0860, 16 bytes long.
 Data: < Wc             > F8 57 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002744BBA0720, 16 bytes long.
 Data: <&#216;Wc             > D8 57 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002744BBA0BD0, 16 bytes long.
 Data: <P c             > 50 04 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002744BBA0FE0, 16 bytes long.
 Data: <0 c             > 30 04 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002744BBA09F0, 16 bytes long.
 Data: <  c             > E0 02 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002744BBA05E0, 16 bytes long.
 Data: <  c             > 10 04 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002744BBA0A40, 16 bytes long.
 Data: <p c             > 70 04 63 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002744BBA09A0, 16 bytes long.
 Data: < &#192;a             > 18 C0 61 93 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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