Task 38685852

Name test_757-GPUGRID_TEST_ATM_40STEP_20261023-28-40-RND7794_0
Workunit 31627306
Created 27 Oct 2026, 23:15:35 UTC
Sent 27 Oct 2026, 23:15:38 UTC
Report deadline 1 Nov 2026, 23:15:38 UTC
Received 28 Oct 2026, 3:08:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 623034
Run time 23 min 2 sec
CPU time 21 min 26 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 44,609.07 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 701.15 MB
Peak swap size 9.98 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.4</core_client_version>
<![CDATA[
<stderr_txt>
20:35:35 (30200): wrapper (7.9.26016): starting
20:35:35 (30200): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
20:35:36 (30200): Library/usr/bin/tar.exe exited; CPU time 0.015625
20:35:36 (30200): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\24\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
Detected memory leaks!
Dumping objects ->
..\api\boinc_api.cpp(309) : {3835117} normal block at 0x0000022252EFEB50, 8 bytes long.
 Data: <  SS"   > 00 00 53 53 22 02 00 00 
..\lib\diagnostics_win.cpp(417) : {3833968} normal block at 0x0000022254CD6650, 1080 bytes long.
 Data: <        @       > 14 12 00 00 CD CD CD CD 40 01 00 00 00 00 00 00 
..\zip\boinc_zip.cpp(122) : {316} normal block at 0x0000022252F013E0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
Object dump complete.
21:45:57 (11032): wrapper (7.9.26016): starting
21:45:57 (11032): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
A subdirectory or file C:\ProgramData\BOINC\slots\24\tmp already exists.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:08:34 (11032): C:/Windows/system32/cmd.exe exited; CPU time 1286.875000
22:08:34 (11032): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 28267179 bytes.
Dumping objects ->
{1546} normal block at 0x0000024306234870, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1535} normal block at 0x0000024306234B80, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1524} normal block at 0x0000024306234800, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{1513} normal block at 0x0000024306234AA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{1502} normal block at 0x0000024306234C60, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{1471} normal block at 0x000002430622E750, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {1458} normal block at 0x00000243062356C0, 8 bytes long.
 Data: <    C   > 00 00 CC 07 43 02 00 00 
{310} normal block at 0x0000024306235A80, 8 bytes long.
 Data: < g# C   > 80 67 23 06 43 02 00 00 
{301} normal block at 0x0000024306225CF0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{300} normal block at 0x00000243062360C0, 16 bytes long.
 Data: < f# C           > 88 66 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000024306236200, 16 bytes long.
 Data: <`f# C           > 60 66 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x0000024306230220, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{297} normal block at 0x0000024306235760, 16 bytes long.
 Data: <8f# C           > 38 66 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000024306235E40, 16 bytes long.
 Data: < f# C           > 10 66 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x0000024306235CB0, 16 bytes long.
 Data: < e# C           > E8 65 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000024306236160, 16 bytes long.
 Data: < e# C           > C0 65 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000024306234B10, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{292} normal block at 0x0000024306236070, 16 bytes long.
 Data: <  " C           > 18 88 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002430622FBC0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{290} normal block at 0x0000024306235FD0, 16 bytes long.
 Data: <  " C           > F0 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000024306236250, 16 bytes long.
 Data: <  " C           > C8 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000024306235620, 16 bytes long.
 Data: <  " C           > A0 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000024306235C10, 16 bytes long.
 Data: <x " C           > 78 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000024306235580, 16 bytes long.
 Data: <P " C           > 50 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000024306235DF0, 16 bytes long.
 Data: <( " C           > 28 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002430622FDA0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{282} normal block at 0x0000024306235A30, 16 bytes long.
 Data: <  " C           > 00 87 22 06 43 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000024306228700, 320 bytes long.
 Data: <0Z# C     " C   > 30 5A 23 06 43 02 00 00 A0 FD 22 06 43 02 00 00 
{280} normal block at 0x0000024306235490, 16 bytes long.
 Data: < e# C           > A0 65 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000024306235C60, 16 bytes long.
 Data: <xe# C           > 78 65 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002430622FF80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{277} normal block at 0x0000024306235BC0, 16 bytes long.
 Data: <Pe# C           > 50 65 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000243062301C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{275} normal block at 0x0000024306236020, 16 bytes long.
 Data: < d# C           > 98 64 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000243062355D0, 16 bytes long.
 Data: <pd# C           > 70 64 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000243062362A0, 16 bytes long.
 Data: <Hd# C           > 48 64 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000024306235710, 16 bytes long.
 Data: < d# C           > 20 64 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000243062358A0, 16 bytes long.
 Data: < c# C           > F8 63 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000024306235670, 16 bytes long.
 Data: < c# C           > D0 63 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000024306235530, 16 bytes long.
 Data: < K# C           > F0 4B 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000024306234BF0, 40 bytes long.
 Data: <0U# C   P " C   > 30 55 23 06 43 02 00 00 50 E7 22 06 43 02 00 00 
{266} normal block at 0x0000024306235B20, 16 bytes long.
 Data: < c# C           > B0 63 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000024306235B70, 16 bytes long.
 Data: < c# C           > 88 63 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002430622FD40, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{263} normal block at 0x0000024306235D50, 16 bytes long.
 Data: <`c# C           > 60 63 23 06 43 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000024306236360, 992 bytes long.
 Data: <P]# C   @ " C   > 50 5D 23 06 43 02 00 00 40 FD 22 06 43 02 00 00 
{98} normal block at 0x000002430622FF20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{97} normal block at 0x000002430622ED50, 16 bytes long.
 Data: <  ! C           > D0 D9 21 06 43 02 00 00 00 00 00 00 00 00 00 00 
{96} normal block at 0x000002430621D9D0, 40 bytes long.
 Data: <P " C     " C   > 50 ED 22 06 43 02 00 00 20 FF 22 06 43 02 00 00 
{75} normal block at 0x000002430622EE90, 16 bytes long.
 Data: <  $#            > 80 EA 24 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{74} normal block at 0x000002430622F020, 16 bytes long.
 Data: <@ $#            > 40 E9 24 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{73} normal block at 0x000002430622EF80, 16 bytes long.
 Data: < W!#            > F8 57 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x000002430622F660, 16 bytes long.
 Data: < W!#            > D8 57 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x000002430622EAD0, 16 bytes long.
 Data: <P !#            > 50 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000002430622EB20, 16 bytes long.
 Data: <0 !#            > 30 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002430622F340, 16 bytes long.
 Data: <  !#            > E0 02 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002430622E850, 16 bytes long.
 Data: <  !#            > 10 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002430622EA80, 16 bytes long.
 Data: <p !#            > 70 04 21 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002430622F610, 16 bytes long.
 Data: <   #            > 18 C0 1F 23 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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