Task 38685849

Name test_405-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND1637_0
Workunit 31627303
Created 27 Oct 2026, 23:14:43 UTC
Sent 27 Oct 2026, 23:14:53 UTC
Report deadline 1 Nov 2026, 23:14:53 UTC
Received 28 Oct 2026, 0:56:45 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 590887
Run time 38 min 27 sec
CPU time 34 min 2 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 11,977.76 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 669.17 MB
Peak swap size 5.28 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
19:20:07 (172944): wrapper (7.9.26016): starting
19:20:07 (172944): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
19:20:09 (172944): Library/usr/bin/tar.exe exited; CPU time 0.000000
19:20:09 (172944): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
19:56:25 (172944): C:/Windows/system32/cmd.exe exited; CPU time 2042.375000
19:56:25 (172944): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 35285729 bytes.
Dumping objects ->
{3835286} normal block at 0x000002537861EEB0, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x000002537861E660, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835264} normal block at 0x000002537861E3C0, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835253} normal block at 0x00000253769E5D10, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835242} normal block at 0x00000253769E5CA0, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835211} normal block at 0x000002537866BE10, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835200} normal block at 0x0000025376A4BAD0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835197} normal block at 0x00000253769DDD10, 8 bytes long.
 Data: <  &#229;vS   > 00 00 E5 76 53 02 00 00 
{3834570} normal block at 0x0000025376A4B930, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x00000253769DE2B0, 8 bytes long.
 Data: <@&#234;&#171;vS   > 40 EA AB 76 53 02 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x00000253769E2CD0, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x00000253769D6EA0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x00000253769E6F50, 16 bytes long.
 Data: < w&#158;vS           > 98 77 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000253769E6D70, 16 bytes long.
 Data: <pw&#158;vS           > 70 77 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x00000253769E0BA0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x00000253769E67D0, 16 bytes long.
 Data: <Hw&#158;vS           > 48 77 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000253769E6D20, 16 bytes long.
 Data: < w&#158;vS           > 20 77 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000253769E6C80, 16 bytes long.
 Data: <&#248;v&#158;vS           > F8 76 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000253769E6870, 16 bytes long.
 Data: <&#208;v&#158;vS           > D0 76 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x00000253769E5AE0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x00000253769E6820, 16 bytes long.
 Data: <(&#255; vS           > 28 FF 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000253769E0600, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x00000253769E6E10, 16 bytes long.
 Data: < &#255; vS           > 00 FF 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000253769E6A00, 16 bytes long.
 Data: <&#216;&#254; vS           > D8 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000253769E6A50, 16 bytes long.
 Data: <&#176;&#254; vS           > B0 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000253769E70E0, 16 bytes long.
 Data: < &#254; vS           > 88 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000253769E6EB0, 16 bytes long.
 Data: <`&#254; vS           > 60 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000253769E7360, 16 bytes long.
 Data: <8&#254; vS           > 38 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x00000253769E05A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x00000253769E7400, 16 bytes long.
 Data: < &#254; vS           > 10 FE 9D 76 53 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000253769DFE10, 320 bytes long.
 Data: < t&#158;vS   &#160; &#158;vS   > 00 74 9E 76 53 02 00 00 A0 05 9E 76 53 02 00 00 
{276} normal block at 0x00000253769E7310, 16 bytes long.
 Data: <&#176;v&#158;vS           > B0 76 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000253769E72C0, 16 bytes long.
 Data: < v&#158;vS           > 88 76 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x00000253769E0540, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x00000253769E6BE0, 16 bytes long.
 Data: <`v&#158;vS           > 60 76 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000253769E00C0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x00000253769E6CD0, 16 bytes long.
 Data: <&#168;u&#158;vS           > A8 75 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000253769E6910, 16 bytes long.
 Data: < u&#158;vS           > 80 75 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000253769E7040, 16 bytes long.
 Data: <Xu&#158;vS           > 58 75 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000253769E6550, 16 bytes long.
 Data: <0u&#158;vS           > 30 75 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000253769E6F00, 16 bytes long.
 Data: < u&#158;vS           > 08 75 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x00000253769E68C0, 16 bytes long.
 Data: <&#224;t&#158;vS           > E0 74 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000253769E7220, 16 bytes long.
 Data: <`W&#158;vS           > 60 57 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x00000253769E5760, 40 bytes long.
 Data: < r&#158;vS    &#190;fxS   > 20 72 9E 76 53 02 00 00 10 BE 66 78 53 02 00 00 
{262} normal block at 0x00000253769E6500, 16 bytes long.
 Data: <&#192;t&#158;vS           > C0 74 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000253769E6690, 16 bytes long.
 Data: < t&#158;vS           > 98 74 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x00000253769E01E0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x00000253769E6C30, 16 bytes long.
 Data: <pt&#158;vS           > 70 74 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x00000253769E7470, 992 bytes long.
 Data: <0l&#158;vS   &#224; &#158;vS   > 30 6C 9E 76 53 02 00 00 E0 01 9E 76 53 02 00 00 
{94} normal block at 0x00000253769E0420, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x00000253769DEA30, 16 bytes long.
 Data: <0\&#158;vS           > 30 5C 9E 76 53 02 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x00000253769E5C30, 40 bytes long.
 Data: <0&#234; vS     &#158;vS   > 30 EA 9D 76 53 02 00 00 20 04 9E 76 53 02 00 00 
{71} normal block at 0x00000253769DE710, 16 bytes long.
 Data: < &#234;&#155;&#216;&#246;           > 80 EA 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000253769DE350, 16 bytes long.
 Data: <@&#233;&#155;&#216;&#246;           > 40 E9 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000253769DE9E0, 16 bytes long.
 Data: <&#248;W &#216;&#246;           > F8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000253769DE940, 16 bytes long.
 Data: <&#216;W &#216;&#246;           > D8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000253769DE8F0, 16 bytes long.
 Data: <P  &#216;&#246;           > 50 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000253769DDC20, 16 bytes long.
 Data: <0  &#216;&#246;           > 30 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000253769DDE50, 16 bytes long.
 Data: <&#224;  &#216;&#246;           > E0 02 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000253769DE120, 16 bytes long.
 Data: <   &#216;&#246;           > 10 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000253769DE300, 16 bytes long.
 Data: <p  &#216;&#246;           > 70 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000253769DE8A0, 16 bytes long.
 Data: < &#192;&#150;&#216;&#246;           > 18 C0 96 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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