Task 38685788

Name test_479-GPUGRID_TEST_ATM_40STEP_20261023-23-40-RND8676_0
Workunit 31627245
Created 27 Oct 2026, 22:55:10 UTC
Sent 27 Oct 2026, 22:55:20 UTC
Report deadline 1 Nov 2026, 22:55:20 UTC
Received 27 Oct 2026, 23:47:20 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 47 min 27 sec
CPU time 47 min 22 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,710.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 680.84 MB
Peak swap size 6.75 GB
Peak disk usage 4.05 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
06:56:55 (33320): wrapper (7.9.26016): starting
06:56:55 (33320): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
06:56:56 (33320): Library/usr/bin/tar.exe exited; CPU time 0.000000
06:56:56 (33320): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
07:43:30 (33320): C:/Windows/system32/cmd.exe exited; CPU time 2842.609375
07:43:30 (33320): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 45500481 bytes.
Dumping objects ->
{3835255} normal block at 0x000002A17561B930, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835244} normal block at 0x000002A17561C340, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x000002A17561BCB0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835222} normal block at 0x000002A17561BFC0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x000002A17561C180, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835180} normal block at 0x000002A178E22A80, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835167} normal block at 0x000002A175618D70, 8 bytes long.
 Data: <   w    > 00 00 01 77 A1 02 00 00 
{3834025} normal block at 0x000002A175618A00, 8 bytes long.
 Data: <  nu    > D0 E9 6E 75 A1 02 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000002A175617120, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002A1755FCF40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000002A175618D20, 16 bytes long.
 Data: <( au            > 28 87 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000002A175618CD0, 16 bytes long.
 Data: <  au            > 00 87 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002A175612A60, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000002A175619040, 16 bytes long.
 Data: <  au            > D8 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000002A175619220, 16 bytes long.
 Data: <  au            > B0 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002A175618870, 16 bytes long.
 Data: <  au            > 88 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002A175618C80, 16 bytes long.
 Data: <` au            > 60 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002A175611730, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000002A175618AF0, 16 bytes long.
 Data: <8 au            > 38 81 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002A175612100, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000002A175614DD0, 16 bytes long.
 Data: <  au            > 10 81 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002A175614600, 16 bytes long.
 Data: <  au            > E8 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000002A175615050, 16 bytes long.
 Data: <  au            > C0 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002A175614C40, 16 bytes long.
 Data: <  au            > 98 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002A175614D80, 16 bytes long.
 Data: <p au            > 70 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000002A175614BF0, 16 bytes long.
 Data: <H au            > 48 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002A175612E80, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000002A175614880, 16 bytes long.
 Data: <  au            > 20 80 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002A175618020, 320 bytes long.
 Data: < Hau     .au    > 80 48 61 75 A1 02 00 00 80 2E 61 75 A1 02 00 00 
{268} normal block at 0x000002A175614790, 16 bytes long.
 Data: <@ au            > 40 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002A1756145B0, 16 bytes long.
 Data: <  au            > 18 86 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002A1756125E0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000002A175614B50, 16 bytes long.
 Data: <  au            > F0 85 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000002A175612AC0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000002A175614510, 16 bytes long.
 Data: <8 au            > 38 85 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002A1756144C0, 16 bytes long.
 Data: <  au            > 10 85 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000002A175614470, 16 bytes long.
 Data: <  au            > E8 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002A175614420, 16 bytes long.
 Data: <  au            > C0 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002A175614380, 16 bytes long.
 Data: <  au            > 98 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000002A175614150, 16 bytes long.
 Data: <p au            > 70 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000002A175615000, 16 bytes long.
 Data: <p au            > 70 15 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000002A175611570, 40 bytes long.
 Data: < Pau     * x    > 00 50 61 75 A1 02 00 00 80 2A E2 78 A1 02 00 00 
{254} normal block at 0x000002A175614FB0, 16 bytes long.
 Data: <P au            > 50 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000002A1756150A0, 16 bytes long.
 Data: <( au            > 28 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000002A175612D00, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000002A175614EC0, 16 bytes long.
 Data: <  au            > 00 84 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000002A175618400, 992 bytes long.
 Data: < Nau     -au    > C0 4E 61 75 A1 02 00 00 00 2D 61 75 A1 02 00 00 
{86} normal block at 0x000002A1756128E0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000002A175614AB0, 16 bytes long.
 Data: <P au            > 50 16 61 75 A1 02 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000002A175611650, 40 bytes long.
 Data: < Jau     (au    > B0 4A 61 75 A1 02 00 00 E0 28 61 75 A1 02 00 00 
{61} normal block at 0x000002A175614CE0, 16 bytes long.
 Data: <   J            > 80 EA 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000002A1756146F0, 16 bytes long.
 Data: <@  J            > 40 E9 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000002A1756146A0, 16 bytes long.
 Data: < W J            > F8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000002A175614920, 16 bytes long.
 Data: < W J            > D8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000002A175614650, 16 bytes long.
 Data: <P  J            > 50 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000002A1756141A0, 16 bytes long.
 Data: <0  J            > 30 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000002A175614A60, 16 bytes long.
 Data: <   J            > E0 02 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000002A175614560, 16 bytes long.
 Data: <   J            > 10 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000002A175614B00, 16 bytes long.
 Data: <p  J            > 70 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000002A1756148D0, 16 bytes long.
 Data: <   J            > 18 C0 10 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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