Task 38685710

Name test_406-GPUGRID_TEST_ATM_40STEP_20261023-27-40-RND8261_0
Workunit 31627170
Created 27 Oct 2026, 22:30:22 UTC
Sent 27 Oct 2026, 22:30:28 UTC
Report deadline 1 Nov 2026, 22:30:28 UTC
Received 27 Oct 2026, 23:58:54 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 650754
Run time 56 min 47 sec
CPU time 56 min 38 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,332.26 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 698.59 MB
Peak swap size 9.85 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.8</core_client_version>
<![CDATA[
<stderr_txt>
23:00:32 (11432): wrapper (7.9.26016): starting
23:00:32 (11432): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
23:00:33 (11432): Library/usr/bin/tar.exe exited; CPU time 0.000000
23:00:33 (11432): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\BOINCdata\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\BOINCdata\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
23:56:31 (11432): C:/Windows/system32/cmd.exe exited; CPU time 3398.937500
23:56:31 (11432): called boinc_finish(0)
0 bytes in 0 Free Blocks.
576 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 37641181 bytes.
Dumping objects ->
{3835233} normal block at 0x0000027524726480, 48 bytes long.
 Data: <PATH=C:\BOINCdat> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 64 61 74 
{3835222} normal block at 0x0000027526364150, 32 bytes long.
 Data: <HOME=C:\BOINCdat> 48 4F 4D 45 3D 43 3A 5C 42 4F 49 4E 43 64 61 74 
{3835211} normal block at 0x0000027526364030, 32 bytes long.
 Data: <TMP=C:\BOINCdata> 54 4D 50 3D 43 3A 5C 42 4F 49 4E 43 64 61 74 61 
{3835200} normal block at 0x00000275263646F0, 32 bytes long.
 Data: <TEMP=C:\BOINCdat> 54 45 4D 50 3D 43 3A 5C 42 4F 49 4E 43 64 61 74 
{3835189} normal block at 0x0000027526363F70, 32 bytes long.
 Data: <TMPDIR=C:\BOINCd> 54 4D 50 44 49 52 3D 43 3A 5C 42 4F 49 4E 43 64 
{3835158} normal block at 0x0000027524725BC0, 48 bytes long.
 Data: <PATH=C:\BOINCdat> 50 41 54 48 3D 43 3A 5C 42 4F 49 4E 43 64 61 74 
{3835147} normal block at 0x00000275246F8F10, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835144} normal block at 0x00000275246F6A30, 8 bytes long.
 Data: <  l$u   > 00 00 6C 24 75 02 00 00 
{3834547} normal block at 0x00000275246F9790, 200 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833947} normal block at 0x00000275246F6D00, 8 bytes long.
 Data: <`&#235;}$u   > 60 EB 7D 24 75 02 00 00 
..\zip\boinc_zip.cpp(122) : {305} normal block at 0x00000275246FC180, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000275246E5A40, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{289} normal block at 0x0000027524702E20, 16 bytes long.
 Data: <X7p$u           > 58 37 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x0000027524703050, 16 bytes long.
 Data: <07p$u           > 30 37 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x00000275246FDBB0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{286} normal block at 0x0000027524702D80, 16 bytes long.
 Data: < 7p$u           > 08 37 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000027524702D30, 16 bytes long.
 Data: <&#224;6p$u           > E0 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000275247031E0, 16 bytes long.
 Data: <&#184;6p$u           > B8 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000027524702CE0, 16 bytes long.
 Data: < 6p$u           > 90 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000275246FE850, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{281} normal block at 0x0000027524702C90, 16 bytes long.
 Data: <8&#175;n$u           > 38 AF 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000275246FE210, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{279} normal block at 0x0000027524702C40, 16 bytes long.
 Data: < &#175;n$u           > 10 AF 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x00000275247027E0, 16 bytes long.
 Data: <&#232;&#174;n$u           > E8 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000027524702510, 16 bytes long.
 Data: <&#192;&#174;n$u           > C0 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000027524703190, 16 bytes long.
 Data: < &#174;n$u           > 98 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000027524702BF0, 16 bytes long.
 Data: <p&#174;n$u           > 70 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000027524703320, 16 bytes long.
 Data: <H&#174;n$u           > 48 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x00000275246FDD90, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{271} normal block at 0x0000027524702BA0, 16 bytes long.
 Data: < &#174;n$u           > 20 AE 6E 24 75 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000275246EAE20, 320 bytes long.
 Data: <&#160;+p$u    &#221;o$u   > A0 2B 70 24 75 02 00 00 90 DD 6F 24 75 02 00 00 
{269} normal block at 0x0000027524703230, 16 bytes long.
 Data: <p6p$u           > 70 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000027524702790, 16 bytes long.
 Data: <H6p$u           > 48 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000275246FE030, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{266} normal block at 0x0000027524702B50, 16 bytes long.
 Data: < 6p$u           > 20 36 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000275246FDA30, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{264} normal block at 0x0000027524702920, 16 bytes long.
 Data: <h5p$u           > 68 35 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000027524702B00, 16 bytes long.
 Data: <@5p$u           > 40 35 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000275247026A0, 16 bytes long.
 Data: < 5p$u           > 18 35 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000275247033C0, 16 bytes long.
 Data: <&#240;4p$u           > F0 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000027524703000, 16 bytes long.
 Data: <&#200;4p$u           > C8 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000027524702740, 16 bytes long.
 Data: <&#160;4p$u           > A0 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x0000027524702AB0, 16 bytes long.
 Data: < &#234;o$u           > 80 EA 6F 24 75 02 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x00000275246FEA80, 40 bytes long.
 Data: <&#176;*p$u   &#192;[r$u   > B0 2A 70 24 75 02 00 00 C0 5B 72 24 75 02 00 00 
{255} normal block at 0x0000027524702880, 16 bytes long.
 Data: < 4p$u           > 80 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{254} normal block at 0x0000027524702DD0, 16 bytes long.
 Data: <X4p$u           > 58 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x00000275246FDB50, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{252} normal block at 0x0000027524702A60, 16 bytes long.
 Data: <04p$u           > 30 34 70 24 75 02 00 00 00 00 00 00 00 00 00 00 
{251} normal block at 0x0000027524703430, 992 bytes long.
 Data: <`*p$u   P&#219;o$u   > 60 2A 70 24 75 02 00 00 50 DB 6F 24 75 02 00 00 
{87} normal block at 0x00000275246FDD30, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{86} normal block at 0x00000275246F6DA0, 16 bytes long.
 Data: <0&#233;o$u           > 30 E9 6F 24 75 02 00 00 00 00 00 00 00 00 00 00 
{85} normal block at 0x00000275246FE930, 40 bytes long.
 Data: <&#160;mo$u   0&#221;o$u   > A0 6D 6F 24 75 02 00 00 30 DD 6F 24 75 02 00 00 
{64} normal block at 0x00000275246F6F30, 16 bytes long.
 Data: < &#234;#&#135;&#247;           > 80 EA 23 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000275246F7160, 16 bytes long.
 Data: <@&#233;#&#135;&#247;           > 40 E9 23 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x00000275246F6940, 16 bytes long.
 Data: <&#248;W &#135;&#247;           > F8 57 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x00000275246F63F0, 16 bytes long.
 Data: <&#216;W &#135;&#247;           > D8 57 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x00000275246F6710, 16 bytes long.
 Data: <P  &#135;&#247;           > 50 04 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x00000275246F63A0, 16 bytes long.
 Data: <0  &#135;&#247;           > 30 04 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x00000275246F6C60, 16 bytes long.
 Data: <&#224;  &#135;&#247;           > E0 02 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x00000275246F6FD0, 16 bytes long.
 Data: <   &#135;&#247;           > 10 04 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x00000275246F66C0, 16 bytes long.
 Data: <p  &#135;&#247;           > 70 04 20 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x00000275246F6350, 16 bytes long.
 Data: < &#192; &#135;&#247;           > 18 C0 1E 87 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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