Task 38685493

Name test_305-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND5899_0
Workunit 31626959
Created 27 Oct 2026, 21:20:53 UTC
Sent 27 Oct 2026, 21:20:55 UTC
Report deadline 1 Nov 2026, 21:20:55 UTC
Received 28 Oct 2026, 0:14:52 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 653795
Run time 58 min 46 sec
CPU time 56 min 21 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,071.14 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 663.68 MB
Peak swap size 3.75 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
18:15:49 (15532): wrapper (7.9.26016): starting
18:15:49 (15532): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
18:15:51 (15532): Library/usr/bin/tar.exe exited; CPU time 0.000000
18:15:51 (15532): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\8\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
19:14:27 (15532): C:/Windows/system32/cmd.exe exited; CPU time 3381.031250
19:14:27 (15532): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 44862025 bytes.
Dumping objects ->
{3835176} normal block at 0x0000013D63EF57F0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835165} normal block at 0x0000013D63EF5BE0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835154} normal block at 0x0000013D63EF6120, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835143} normal block at 0x0000013D63EF5780, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835132} normal block at 0x0000013D63EF6190, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835101} normal block at 0x0000013D65A342C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835088} normal block at 0x0000013D63EC75C0, 8 bytes long.
 Data: <  &#232;c=   > 00 00 E8 63 3D 01 00 00 
{3833945} normal block at 0x0000013D63EC6D00, 8 bytes long.
 Data: <&#192; &#169;e=   > C0 1C A9 65 3D 01 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x0000013D63ED1450, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000013D63EB5BC0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x0000013D63ED2D00, 16 bytes long.
 Data: <H5&#237;c=           > 48 35 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x0000013D63ED3020, 16 bytes long.
 Data: < 5&#237;c=           > 20 35 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000013D63ECD870, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x0000013D63ED2C60, 16 bytes long.
 Data: <&#248;4&#237;c=           > F8 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000013D63ED2CB0, 16 bytes long.
 Data: <&#208;4&#237;c=           > D0 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000013D63ED23F0, 16 bytes long.
 Data: <&#168;4&#237;c=           > A8 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000013D63ED2C10, 16 bytes long.
 Data: < 4&#237;c=           > 80 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000013D63ECBE80, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x0000013D63ED2BC0, 16 bytes long.
 Data: <X[&#235;c=           > 58 5B EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000013D63ECD510, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x0000013D63ED28A0, 16 bytes long.
 Data: <0[&#235;c=           > 30 5B EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000013D63ED2DF0, 16 bytes long.
 Data: < [&#235;c=           > 08 5B EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x0000013D63ED2530, 16 bytes long.
 Data: <&#224;Z&#235;c=           > E0 5A EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000013D63ED2580, 16 bytes long.
 Data: <&#184;Z&#235;c=           > B8 5A EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x0000013D63ED2AD0, 16 bytes long.
 Data: < Z&#235;c=           > 90 5A EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000013D63ED2A30, 16 bytes long.
 Data: <hZ&#235;c=           > 68 5A EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000013D63ECD930, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x0000013D63ED3160, 16 bytes long.
 Data: <@Z&#235;c=           > 40 5A EB 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000013D63EB5A40, 320 bytes long.
 Data: <`1&#237;c=   0&#217;&#236;c=   > 60 31 ED 63 3D 01 00 00 30 D9 EC 63 3D 01 00 00 
{268} normal block at 0x0000013D63ED2990, 16 bytes long.
 Data: <`4&#237;c=           > 60 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x0000013D63ED2FD0, 16 bytes long.
 Data: <84&#237;c=           > 38 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000013D63ECD7B0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x0000013D63ED26C0, 16 bytes long.
 Data: < 4&#237;c=           > 10 34 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x0000013D63ECD750, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x0000013D63ED2670, 16 bytes long.
 Data: <X3&#237;c=           > 58 33 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000013D63ED2A80, 16 bytes long.
 Data: <03&#237;c=           > 30 33 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x0000013D63ED25D0, 16 bytes long.
 Data: < 3&#237;c=           > 08 33 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000013D63ED29E0, 16 bytes long.
 Data: <&#224;2&#237;c=           > E0 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x0000013D63ED2940, 16 bytes long.
 Data: <&#184;2&#237;c=           > B8 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x0000013D63ED27B0, 16 bytes long.
 Data: < 2&#237;c=           > 90 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x0000013D63ED28F0, 16 bytes long.
 Data: <&#240;&#183;&#236;c=           > F0 B7 EC 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x0000013D63ECB7F0, 40 bytes long.
 Data: <&#240;(&#237;c=   &#192;B&#163;e=   > F0 28 ED 63 3D 01 00 00 C0 42 A3 65 3D 01 00 00 
{254} normal block at 0x0000013D63ED24E0, 16 bytes long.
 Data: <p2&#237;c=           > 70 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x0000013D63ED2850, 16 bytes long.
 Data: <H2&#237;c=           > 48 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x0000013D63ECD5D0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x0000013D63ED2760, 16 bytes long.
 Data: < 2&#237;c=           > 20 32 ED 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x0000013D63ED3220, 992 bytes long.
 Data: <`'&#237;c=   &#208;&#213;&#236;c=   > 60 27 ED 63 3D 01 00 00 D0 D5 EC 63 3D 01 00 00 
{86} normal block at 0x0000013D63ECD990, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x0000013D63EC7520, 16 bytes long.
 Data: <&#160;&#189;&#236;c=           > A0 BD EC 63 3D 01 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x0000013D63ECBDA0, 40 bytes long.
 Data: < u&#236;c=    &#217;&#236;c=   > 20 75 EC 63 3D 01 00 00 90 D9 EC 63 3D 01 00 00 
{63} normal block at 0x0000013D63EC6C60, 16 bytes long.
 Data: < &#234; U&#246;           > 80 EA 00 55 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x0000013D63EC6C10, 16 bytes long.
 Data: <@&#233; U&#246;           > 40 E9 00 55 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x0000013D63EC7660, 16 bytes long.
 Data: <&#248;W&#253;T&#246;           > F8 57 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x0000013D63EC7700, 16 bytes long.
 Data: <&#216;W&#253;T&#246;           > D8 57 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x0000013D63EC6FD0, 16 bytes long.
 Data: <P &#253;T&#246;           > 50 04 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x0000013D63EC6DA0, 16 bytes long.
 Data: <0 &#253;T&#246;           > 30 04 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x0000013D63EC7570, 16 bytes long.
 Data: <&#224; &#253;T&#246;           > E0 02 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x0000013D63EC6BC0, 16 bytes long.
 Data: <  &#253;T&#246;           > 10 04 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x0000013D63EC7200, 16 bytes long.
 Data: <p &#253;T&#246;           > 70 04 FD 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x0000013D63EC7610, 16 bytes long.
 Data: < &#192;&#251;T&#246;           > 18 C0 FB 54 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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