Task 38685485

Name test_403-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND1692_0
Workunit 31626951
Created 27 Oct 2026, 21:17:11 UTC
Sent 27 Oct 2026, 21:17:14 UTC
Report deadline 1 Nov 2026, 21:17:14 UTC
Received 27 Oct 2026, 22:17:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 610900
Run time 58 min 5 sec
CPU time 51 min 48 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 7,990.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 738.90 MB
Peak swap size 9.91 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
17:18:49 (46980): wrapper (7.9.26016): starting
17:18:49 (46980): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:18:50 (46980): Library/usr/bin/tar.exe exited; CPU time 0.031250
17:18:51 (46980): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:16:28 (46980): C:/Windows/system32/cmd.exe exited; CPU time 3108.484375
18:16:28 (46980): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 82731269 bytes.
Dumping objects ->
{3835500} normal block at 0x000002798C9643A0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835489} normal block at 0x000002798C964560, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835478} normal block at 0x000002798C9644F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835467} normal block at 0x000002798C964870, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835456} normal block at 0x000002798C964640, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835425} normal block at 0x000002798E6B51F0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835412} normal block at 0x000002798C95EFA0, 8 bytes long.
 Data: <  &#215;&#140;y   > 00 00 D7 8C 79 02 00 00 
{3833959} normal block at 0x000002798C95EE60, 8 bytes long.
 Data: <`&#235;&#163;&#140;y   > 60 EB A3 8C 79 02 00 00 
..\zip\boinc_zip.cpp(122) : {311} normal block at 0x000002798C960D90, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x000002798C956160, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{295} normal block at 0x000002798C965CF0, 16 bytes long.
 Data: < b&#150;&#140;y           > 18 62 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000002798C965CA0, 16 bytes long.
 Data: <&#240;a&#150;&#140;y           > F0 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x000002798C95F600, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{292} normal block at 0x000002798C9654D0, 16 bytes long.
 Data: <&#200;a&#150;&#140;y           > C8 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000002798C965C50, 16 bytes long.
 Data: <&#160;a&#150;&#140;y           > A0 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000002798C9658E0, 16 bytes long.
 Data: <xa&#150;&#140;y           > 78 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000002798C965BB0, 16 bytes long.
 Data: <Pa&#150;&#140;y           > 50 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x000002798C964330, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{287} normal block at 0x000002798C965890, 16 bytes long.
 Data: <&#232;&#180;&#148;&#140;y           > E8 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000002798C95F780, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{285} normal block at 0x000002798C9652F0, 16 bytes long.
 Data: <&#192;&#180;&#148;&#140;y           > C0 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000002798C965AC0, 16 bytes long.
 Data: < &#180;&#148;&#140;y           > 98 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000002798C9652A0, 16 bytes long.
 Data: <p&#180;&#148;&#140;y           > 70 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000002798C965660, 16 bytes long.
 Data: <H&#180;&#148;&#140;y           > 48 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000002798C965610, 16 bytes long.
 Data: < &#180;&#148;&#140;y           > 20 B4 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000002798C965200, 16 bytes long.
 Data: <&#248;&#179;&#148;&#140;y           > F8 B3 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000002798C95F2A0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{277} normal block at 0x000002798C965840, 16 bytes long.
 Data: <&#208;&#179;&#148;&#140;y           > D0 B3 94 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000002798C94B3D0, 320 bytes long.
 Data: <@X&#150;&#140;y   &#160;&#242;&#149;&#140;y   > 40 58 96 8C 79 02 00 00 A0 F2 95 8C 79 02 00 00 
{275} normal block at 0x000002798C965A20, 16 bytes long.
 Data: <0a&#150;&#140;y           > 30 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000002798C965E80, 16 bytes long.
 Data: < a&#150;&#140;y           > 08 61 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000002798C95FC60, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{272} normal block at 0x000002798C965E30, 16 bytes long.
 Data: <&#224;`&#150;&#140;y           > E0 60 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000002798C95F5A0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{270} normal block at 0x000002798C964F30, 16 bytes long.
 Data: <(`&#150;&#140;y           > 28 60 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000002798C9653E0, 16 bytes long.
 Data: < `&#150;&#140;y           > 00 60 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000002798C9659D0, 16 bytes long.
 Data: <&#216;_&#150;&#140;y           > D8 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000002798C9657F0, 16 bytes long.
 Data: <&#176;_&#150;&#140;y           > B0 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000002798C965480, 16 bytes long.
 Data: < _&#150;&#140;y           > 88 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000002798C965250, 16 bytes long.
 Data: <`_&#150;&#140;y           > 60 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000002798C965A70, 16 bytes long.
 Data: <&#176;F&#150;&#140;y           > B0 46 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000002798C9646B0, 40 bytes long.
 Data: <pZ&#150;&#140;y   &#240;Qk&#142;y   > 70 5A 96 8C 79 02 00 00 F0 51 6B 8E 79 02 00 00 
{261} normal block at 0x000002798C965C00, 16 bytes long.
 Data: <@_&#150;&#140;y           > 40 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000002798C965110, 16 bytes long.
 Data: < _&#150;&#140;y           > 18 5F 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000002798C95F8A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{258} normal block at 0x000002798C965D90, 16 bytes long.
 Data: <&#240;^&#150;&#140;y           > F0 5E 96 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{257} normal block at 0x000002798C965EF0, 992 bytes long.
 Data: < ]&#150;&#140;y   &#160;&#248;&#149;&#140;y   > 90 5D 96 8C 79 02 00 00 A0 F8 95 8C 79 02 00 00 
{93} normal block at 0x000002798C95FEA0, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{92} normal block at 0x000002798C95E550, 16 bytes long.
 Data: <&#160;9&#149;&#140;y           > A0 39 95 8C 79 02 00 00 00 00 00 00 00 00 00 00 
{91} normal block at 0x000002798C9539A0, 40 bytes long.
 Data: <P&#229;&#149;&#140;y   &#160;&#254;&#149;&#140;y   > 50 E5 95 8C 79 02 00 00 A0 FE 95 8C 79 02 00 00 
{70} normal block at 0x000002798C95ED70, 16 bytes long.
 Data: < &#234;&#203;e&#247;           > 80 EA CB 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000002798C95E500, 16 bytes long.
 Data: <@&#233;&#203;e&#247;           > 40 E9 CB 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000002798C95EE10, 16 bytes long.
 Data: <&#248;W&#200;e&#247;           > F8 57 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000002798C95EA00, 16 bytes long.
 Data: <&#216;W&#200;e&#247;           > D8 57 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000002798C95E3C0, 16 bytes long.
 Data: <P &#200;e&#247;           > 50 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000002798C95E7D0, 16 bytes long.
 Data: <0 &#200;e&#247;           > 30 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000002798C95ED20, 16 bytes long.
 Data: <&#224; &#200;e&#247;           > E0 02 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000002798C95E780, 16 bytes long.
 Data: <  &#200;e&#247;           > 10 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000002798C95E870, 16 bytes long.
 Data: <p &#200;e&#247;           > 70 04 C8 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000002798C95E9B0, 16 bytes long.
 Data: < &#192;&#198;e&#247;           > 18 C0 C6 65 F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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