Task 38685371

Name test_435-GPUGRID_TEST_ATM_40STEP_20261023-19-40-RND5744_0
Workunit 31626841
Created 27 Oct 2026, 20:45:34 UTC
Sent 27 Oct 2026, 20:45:37 UTC
Report deadline 1 Nov 2026, 20:45:37 UTC
Received 27 Oct 2026, 22:11:19 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 630739
Run time 40 min 52 sec
CPU time 37 min 40 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 15,302.18 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 729.00 MB
Peak swap size 11.38 GB
Peak disk usage 4.18 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
17:31:31 (18124): wrapper (7.9.26016): starting
17:31:31 (18124): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
17:31:33 (18124): Library/usr/bin/tar.exe exited; CPU time 0.000000
17:31:33 (18124): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\28\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
18:10:35 (18124): C:/Windows/system32/cmd.exe exited; CPU time 2260.109375
18:10:35 (18124): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 48591649 bytes.
Dumping objects ->
{3835284} normal block at 0x00000288BE5BD490, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835273} normal block at 0x00000288BC7B46D0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835262} normal block at 0x00000288BC7B4660, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835251} normal block at 0x00000288BC7B4BA0, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835240} normal block at 0x00000288BC7B4D60, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835209} normal block at 0x00000288BE609100, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835198} normal block at 0x00000288BE61E520, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835195} normal block at 0x00000288BC7AFA00, 8 bytes long.
 Data: <  &#211;&#188;    > 00 00 D3 BC 88 02 00 00 
{3834571} normal block at 0x00000288BE61E730, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833963} normal block at 0x00000288BC7AF9B0, 8 bytes long.
 Data: < 9f&#190;    > 80 39 66 BE 88 02 00 00 
..\zip\boinc_zip.cpp(122) : {313} normal block at 0x00000288BC7A6600, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{298} normal block at 0x00000288BC7A7A60, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{297} normal block at 0x00000288BC7B5B50, 16 bytes long.
 Data: < g{&#188;            > 08 67 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x00000288BC7B60F0, 16 bytes long.
 Data: <&#224;f{&#188;            > E0 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x00000288BC7B0BC0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{294} normal block at 0x00000288BC7B5920, 16 bytes long.
 Data: <&#184;f{&#188;            > B8 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x00000288BC7B6050, 16 bytes long.
 Data: < f{&#188;            > 90 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x00000288BC7B5B00, 16 bytes long.
 Data: <hf{&#188;            > 68 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x00000288BC7B5970, 16 bytes long.
 Data: <@f{&#188;            > 40 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x00000288BC7B4A50, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{289} normal block at 0x00000288BC7B5650, 16 bytes long.
 Data: <&#248;&#159;z&#188;            > F8 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{288} normal block at 0x00000288BC7B0DA0, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{287} normal block at 0x00000288BC7B54C0, 16 bytes long.
 Data: <&#208;&#159;z&#188;            > D0 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x00000288BC7B5880, 16 bytes long.
 Data: <&#168;&#159;z&#188;            > A8 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x00000288BC7B5A60, 16 bytes long.
 Data: < &#159;z&#188;            > 80 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x00000288BC7B5D80, 16 bytes long.
 Data: <X&#159;z&#188;            > 58 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x00000288BC7B5A10, 16 bytes long.
 Data: <0&#159;z&#188;            > 30 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x00000288BC7B5FB0, 16 bytes long.
 Data: < &#159;z&#188;            > 08 9F 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x00000288BC7B0EC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{279} normal block at 0x00000288BC7B5830, 16 bytes long.
 Data: <&#224;&#158;z&#188;            > E0 9E 7A BC 88 02 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x00000288BC7A9EE0, 320 bytes long.
 Data: <0X{&#188;    &#192; {&#188;    > 30 58 7B BC 88 02 00 00 C0 0E 7B BC 88 02 00 00 
{277} normal block at 0x00000288BC7B5600, 16 bytes long.
 Data: < f{&#188;            > 20 66 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x00000288BC7B57E0, 16 bytes long.
 Data: <&#248;e{&#188;            > F8 65 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x00000288BC7B1100, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{274} normal block at 0x00000288BC7B5F10, 16 bytes long.
 Data: <&#208;e{&#188;            > D0 65 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x00000288BC7B0E60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{272} normal block at 0x00000288BC7B5BA0, 16 bytes long.
 Data: < e{&#188;            > 18 65 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x00000288BC7B5790, 16 bytes long.
 Data: <&#240;d{&#188;            > F0 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x00000288BC7B6000, 16 bytes long.
 Data: <&#200;d{&#188;            > C8 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x00000288BC7B60A0, 16 bytes long.
 Data: <&#160;d{&#188;            > A0 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x00000288BC7B59C0, 16 bytes long.
 Data: <xd{&#188;            > 78 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x00000288BC7B5EC0, 16 bytes long.
 Data: <Pd{&#188;            > 50 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x00000288BC7B5D30, 16 bytes long.
 Data: < L{&#188;            > 10 4C 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x00000288BC7B4C10, 40 bytes long.
 Data: <0]{&#188;     &#145;`&#190;    > 30 5D 7B BC 88 02 00 00 00 91 60 BE 88 02 00 00 
{263} normal block at 0x00000288BC7B5F60, 16 bytes long.
 Data: <0d{&#188;            > 30 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x00000288BC7B5CE0, 16 bytes long.
 Data: < d{&#188;            > 08 64 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x00000288BC7B0AA0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{260} normal block at 0x00000288BC7B5BF0, 16 bytes long.
 Data: <&#224;c{&#188;            > E0 63 7B BC 88 02 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x00000288BC7B63E0, 992 bytes long.
 Data: <&#240;[{&#188;    &#160; {&#188;    > F0 5B 7B BC 88 02 00 00 A0 0A 7B BC 88 02 00 00 
{95} normal block at 0x00000288BC7B0860, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{94} normal block at 0x00000288BC7B0040, 16 bytes long.
 Data: <`&#201;y&#188;            > 60 C9 79 BC 88 02 00 00 00 00 00 00 00 00 00 00 
{93} normal block at 0x00000288BC79C960, 40 bytes long.
 Data: <@ {&#188;    ` {&#188;    > 40 00 7B BC 88 02 00 00 60 08 7B BC 88 02 00 00 
{72} normal block at 0x00000288BC7B05E0, 16 bytes long.
 Data: < &#234;g[&#246;           > 80 EA 67 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x00000288BC7B01D0, 16 bytes long.
 Data: <@&#233;g[&#246;           > 40 E9 67 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x00000288BC7AF960, 16 bytes long.
 Data: <&#248;Wd[&#246;           > F8 57 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x00000288BC7AF910, 16 bytes long.
 Data: <&#216;Wd[&#246;           > D8 57 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x00000288BC7AF730, 16 bytes long.
 Data: <P d[&#246;           > 50 04 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x00000288BC7B0590, 16 bytes long.
 Data: <0 d[&#246;           > 30 04 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x00000288BC7AFF00, 16 bytes long.
 Data: <&#224; d[&#246;           > E0 02 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x00000288BC7AFEB0, 16 bytes long.
 Data: <  d[&#246;           > 10 04 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x00000288BC7AFB40, 16 bytes long.
 Data: <p d[&#246;           > 70 04 64 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x00000288BC7AFA50, 16 bytes long.
 Data: < &#192;b[&#246;           > 18 C0 62 5B F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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