Task 38685295

Name test_363-GPUGRID_TEST_ATM_40STEP_20261023-31-40-RND1539_0
Workunit 31626770
Created 27 Oct 2026, 20:20:55 UTC
Sent 27 Oct 2026, 20:20:56 UTC
Report deadline 1 Nov 2026, 20:20:56 UTC
Received 27 Oct 2026, 22:22:12 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 590887
Run time 38 min 29 sec
CPU time 34 min 9 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 11,977.76 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 673.94 MB
Peak swap size 5.28 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.11</core_client_version>
<![CDATA[
<stderr_txt>
16:45:26 (79608): wrapper (7.9.26016): starting
16:45:26 (79608): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
16:45:29 (79608): Library/usr/bin/tar.exe exited; CPU time 0.000000
16:45:29 (79608): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'E:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'E:\ProgramData\BOINC\slots\1\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
17:21:51 (79608): C:/Windows/system32/cmd.exe exited; CPU time 2049.937500
17:21:51 (79608): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 35398253 bytes.
Dumping objects ->
{3835286} normal block at 0x000001CF338FD7B0, 48 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x000001CF338FE000, 48 bytes long.
 Data: <HOME=E:\ProgramD> 48 4F 4D 45 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835264} normal block at 0x000001CF338FE150, 48 bytes long.
 Data: <TMP=E:\ProgramDa> 54 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835253} normal block at 0x000001CF31C55930, 48 bytes long.
 Data: <TEMP=E:\ProgramD> 54 45 4D 50 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835242} normal block at 0x000001CF31C55850, 48 bytes long.
 Data: <TMPDIR=E:\Progra> 54 4D 50 44 49 52 3D 45 3A 5C 50 72 6F 67 72 61 
{3835211} normal block at 0x000001CF33948EA0, 64 bytes long.
 Data: <PATH=E:\ProgramD> 50 41 54 48 3D 45 3A 5C 50 72 6F 67 72 61 6D 44 
{3835200} normal block at 0x000001CF31CBB1B0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835197} normal block at 0x000001CF31C4EEA0, 8 bytes long.
 Data: <   2&#207;   > 00 00 04 32 CF 01 00 00 
{3834570} normal block at 0x000001CF31CBB010, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833961} normal block at 0x000001CF31C4EAE0, 8 bytes long.
 Data: <&#176;&#198;&#199;1&#207;   > B0 C6 C7 31 CF 01 00 00 
..\zip\boinc_zip.cpp(122) : {312} normal block at 0x000001CF31C40570, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x000001CF31C48550, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{296} normal block at 0x000001CF31C561B0, 16 bytes long.
 Data: <Xs&#197;1&#207;           > 58 73 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{295} normal block at 0x000001CF31C56480, 16 bytes long.
 Data: <0s&#197;1&#207;           > 30 73 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x000001CF31C512C0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{293} normal block at 0x000001CF31C56D40, 16 bytes long.
 Data: < s&#197;1&#207;           > 08 73 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001CF31C56CA0, 16 bytes long.
 Data: <&#224;r&#197;1&#207;           > E0 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x000001CF31C56CF0, 16 bytes long.
 Data: <&#184;r&#197;1&#207;           > B8 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001CF31C56E30, 16 bytes long.
 Data: < r&#197;1&#207;           > 90 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001CF31C55460, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{288} normal block at 0x000001CF31C567A0, 16 bytes long.
 Data: <&#168; &#197;1&#207;           > A8 0C C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001CF31C51C20, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{286} normal block at 0x000001CF31C56700, 16 bytes long.
 Data: <  &#197;1&#207;           > 80 0C C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001CF31C56390, 16 bytes long.
 Data: <X &#197;1&#207;           > 58 0C C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001CF31C56340, 16 bytes long.
 Data: <0 &#197;1&#207;           > 30 0C C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001CF31C56520, 16 bytes long.
 Data: <  &#197;1&#207;           > 08 0C C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001CF31C56610, 16 bytes long.
 Data: <&#224; &#197;1&#207;           > E0 0B C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{280} normal block at 0x000001CF31C568E0, 16 bytes long.
 Data: <&#184; &#197;1&#207;           > B8 0B C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001CF31C51260, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{278} normal block at 0x000001CF31C56AC0, 16 bytes long.
 Data: <  &#197;1&#207;           > 90 0B C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001CF31C50B90, 320 bytes long.
 Data: <&#192;j&#197;1&#207;   ` &#197;1&#207;   > C0 6A C5 31 CF 01 00 00 60 12 C5 31 CF 01 00 00 
{276} normal block at 0x000001CF31C56980, 16 bytes long.
 Data: <pr&#197;1&#207;           > 70 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001CF31C56160, 16 bytes long.
 Data: <Hr&#197;1&#207;           > 48 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001CF31C51C80, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{273} normal block at 0x000001CF31C56200, 16 bytes long.
 Data: < r&#197;1&#207;           > 20 72 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001CF31C51500, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{271} normal block at 0x000001CF31C56890, 16 bytes long.
 Data: <hq&#197;1&#207;           > 68 71 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001CF31C56250, 16 bytes long.
 Data: <@q&#197;1&#207;           > 40 71 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001CF31C56070, 16 bytes long.
 Data: < q&#197;1&#207;           > 18 71 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x000001CF31C56A20, 16 bytes long.
 Data: <&#240;p&#197;1&#207;           > F0 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001CF31C562F0, 16 bytes long.
 Data: <&#200;p&#197;1&#207;           > C8 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001CF31C56C50, 16 bytes long.
 Data: <&#160;p&#197;1&#207;           > A0 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001CF31C56F20, 16 bytes long.
 Data: < Z&#197;1&#207;           > 10 5A C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001CF31C55A10, 40 bytes long.
 Data: < o&#197;1&#207;   &#160;&#142;&#148;3&#207;   > 20 6F C5 31 CF 01 00 00 A0 8E 94 33 CF 01 00 00 
{262} normal block at 0x000001CF31C56A70, 16 bytes long.
 Data: < p&#197;1&#207;           > 80 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001CF31C563E0, 16 bytes long.
 Data: <Xp&#197;1&#207;           > 58 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001CF31C511A0, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{259} normal block at 0x000001CF31C562A0, 16 bytes long.
 Data: <0p&#197;1&#207;           > 30 70 C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001CF31C57030, 992 bytes long.
 Data: <&#160;b&#197;1&#207;   &#160; &#197;1&#207;   > A0 62 C5 31 CF 01 00 00 A0 11 C5 31 CF 01 00 00 
{94} normal block at 0x000001CF31C50D80, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{93} normal block at 0x000001CF31C4EFE0, 16 bytes long.
 Data: <&#240;Z&#197;1&#207;           > F0 5A C5 31 CF 01 00 00 00 00 00 00 00 00 00 00 
{92} normal block at 0x000001CF31C55AF0, 40 bytes long.
 Data: <&#224;&#239;&#196;1&#207;     &#197;1&#207;   > E0 EF C4 31 CF 01 00 00 80 0D C5 31 CF 01 00 00 
{71} normal block at 0x000001CF31C4EE50, 16 bytes long.
 Data: < &#234;&#155;&#216;&#246;           > 80 EA 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x000001CF31C4EB30, 16 bytes long.
 Data: <@&#233;&#155;&#216;&#246;           > 40 E9 9B D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x000001CF31C4F490, 16 bytes long.
 Data: <&#248;W &#216;&#246;           > F8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x000001CF31C4E900, 16 bytes long.
 Data: <&#216;W &#216;&#246;           > D8 57 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x000001CF31C4F300, 16 bytes long.
 Data: <P  &#216;&#246;           > 50 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x000001CF31C4F1C0, 16 bytes long.
 Data: <0  &#216;&#246;           > 30 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001CF31C4F350, 16 bytes long.
 Data: <&#224;  &#216;&#246;           > E0 02 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001CF31C4EA90, 16 bytes long.
 Data: <   &#216;&#246;           > 10 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001CF31C4F800, 16 bytes long.
 Data: <p  &#216;&#246;           > 70 04 98 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001CF31C4EE00, 16 bytes long.
 Data: < &#192;&#150;&#216;&#246;           > 18 C0 96 D8 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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