Task 38685289

Name test_642-GPUGRID_TEST_ATM_40STEP_20261023-36-40-RND3962_0
Workunit 31626764
Created 27 Oct 2026, 20:20:05 UTC
Sent 27 Oct 2026, 20:20:06 UTC
Report deadline 1 Nov 2026, 20:20:06 UTC
Received 27 Oct 2026, 21:11:10 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 517637
Run time 46 min 45 sec
CPU time 46 min 45 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 5,030.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 713.52 MB
Peak swap size 9.74 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.0.2</core_client_version>
<![CDATA[
<stderr_txt>
21:22:55 (3444): wrapper (7.9.26016): starting
21:22:55 (3444): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:22:56 (3444): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:22:56 (3444): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\22\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\22\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:09:56 (3444): C:/Windows/system32/cmd.exe exited; CPU time 2805.968750
22:09:56 (3444): called boinc_finish(0)
0 bytes in 0 Free Blocks.
460 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 48170937 bytes.
Dumping objects ->
{3835363} normal block at 0x0000025F0FEFB670, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835352} normal block at 0x0000025F0FEFAF00, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835341} normal block at 0x0000025F0FED4F10, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835330} normal block at 0x0000025F0FED4E30, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835319} normal block at 0x0000025F0FED4A40, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835288} normal block at 0x0000025F11C666C0, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835277} normal block at 0x0000025F11CB86B0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835274} normal block at 0x0000025F0FECF850, 8 bytes long.
 Data: <  &#234; _   > 00 00 EA 0F 5F 02 00 00 
{3834606} normal block at 0x0000025F11CB88C0, 102 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833965} normal block at 0x0000025F0FECF260, 8 bytes long.
 Data: <`J&#207; _   > 60 4A CF 11 5F 02 00 00 
..\zip\boinc_zip.cpp(122) : {314} normal block at 0x0000025F0FED1370, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{299} normal block at 0x0000025F0FEC66B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{298} normal block at 0x0000025F0FED62B0, 16 bytes long.
 Data: <&#200;h&#237; _           > C8 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{297} normal block at 0x0000025F0FED5F90, 16 bytes long.
 Data: <&#160;h&#237; _           > A0 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{296} normal block at 0x0000025F0FECFCE0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{295} normal block at 0x0000025F0FED5C70, 16 bytes long.
 Data: <xh&#237; _           > 78 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{294} normal block at 0x0000025F0FED5950, 16 bytes long.
 Data: <Ph&#237; _           > 50 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{293} normal block at 0x0000025F0FED5900, 16 bytes long.
 Data: <(h&#237; _           > 28 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x0000025F0FED5860, 16 bytes long.
 Data: < h&#237; _           > 00 68 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{291} normal block at 0x0000025F0FED4EA0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{290} normal block at 0x0000025F0FED5810, 16 bytes long.
 Data: < &#232;&#236; _           > 08 E8 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x0000025F0FECFC80, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{288} normal block at 0x0000025F0FED5EF0, 16 bytes long.
 Data: <&#224;&#231;&#236; _           > E0 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x0000025F0FED58B0, 16 bytes long.
 Data: <&#184;&#231;&#236; _           > B8 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x0000025F0FED57C0, 16 bytes long.
 Data: < &#231;&#236; _           > 90 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x0000025F0FED5C20, 16 bytes long.
 Data: <h&#231;&#236; _           > 68 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x0000025F0FED5770, 16 bytes long.
 Data: <@&#231;&#236; _           > 40 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x0000025F0FED5720, 16 bytes long.
 Data: < &#231;&#236; _           > 18 E7 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x0000025F0FECFC20, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{280} normal block at 0x0000025F0FED5E00, 16 bytes long.
 Data: <&#240;&#230;&#236; _           > F0 E6 EC 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x0000025F0FECE6F0, 320 bytes long.
 Data: < ^&#237; _    &#252;&#236; _   > 00 5E ED 0F 5F 02 00 00 20 FC EC 0F 5F 02 00 00 
{278} normal block at 0x0000025F0FED56D0, 16 bytes long.
 Data: <&#224;g&#237; _           > E0 67 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x0000025F0FED5BD0, 16 bytes long.
 Data: <&#184;g&#237; _           > B8 67 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x0000025F0FED00A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{275} normal block at 0x0000025F0FED5680, 16 bytes long.
 Data: < g&#237; _           > 90 67 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x0000025F0FECFB60, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{273} normal block at 0x0000025F0FED5A40, 16 bytes long.
 Data: <&#216;f&#237; _           > D8 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x0000025F0FED63F0, 16 bytes long.
 Data: <&#176;f&#237; _           > B0 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x0000025F0FED6530, 16 bytes long.
 Data: < f&#237; _           > 88 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x0000025F0FED5CC0, 16 bytes long.
 Data: <`f&#237; _           > 60 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x0000025F0FED5B80, 16 bytes long.
 Data: <8f&#237; _           > 38 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{268} normal block at 0x0000025F0FED5B30, 16 bytes long.
 Data: < f&#237; _           > 10 66 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x0000025F0FED63A0, 16 bytes long.
 Data: <&#224;L&#237; _           > E0 4C ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x0000025F0FED4CE0, 40 bytes long.
 Data: <&#160;c&#237; _   &#192;f&#198; _   > A0 63 ED 0F 5F 02 00 00 C0 66 C6 11 5F 02 00 00 
{264} normal block at 0x0000025F0FED5630, 16 bytes long.
 Data: <&#240;e&#237; _           > F0 65 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x0000025F0FED6440, 16 bytes long.
 Data: <&#200;e&#237; _           > C8 65 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x0000025F0FED0700, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{261} normal block at 0x0000025F0FED6030, 16 bytes long.
 Data: <&#160;e&#237; _           > A0 65 ED 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x0000025F0FED65A0, 992 bytes long.
 Data: <0`&#237; _     &#237; _   > 30 60 ED 0F 5F 02 00 00 00 07 ED 0F 5F 02 00 00 
{96} normal block at 0x0000025F0FED0340, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{95} normal block at 0x0000025F0FECF080, 16 bytes long.
 Data: <&#224;&#240;&#235; _           > E0 F0 EB 0F 5F 02 00 00 00 00 00 00 00 00 00 00 
{94} normal block at 0x0000025F0FEBF0E0, 40 bytes long.
 Data: < &#240;&#236; _   @ &#237; _   > 80 F0 EC 0F 5F 02 00 00 40 03 ED 0F 5F 02 00 00 
{73} normal block at 0x0000025F0FECF440, 16 bytes long.
 Data: < &#234;&#217;*&#246;           > 80 EA D9 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{72} normal block at 0x0000025F0FECED60, 16 bytes long.
 Data: <@&#233;&#217;*&#246;           > 40 E9 D9 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{71} normal block at 0x0000025F0FECF210, 16 bytes long.
 Data: <&#248;W&#214;*&#246;           > F8 57 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{70} normal block at 0x0000025F0FECF5D0, 16 bytes long.
 Data: <&#216;W&#214;*&#246;           > D8 57 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{69} normal block at 0x0000025F0FECED10, 16 bytes long.
 Data: <P &#214;*&#246;           > 50 04 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{68} normal block at 0x0000025F0FECF800, 16 bytes long.
 Data: <0 &#214;*&#246;           > 30 04 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{67} normal block at 0x0000025F0FECEEA0, 16 bytes long.
 Data: <&#224; &#214;*&#246;           > E0 02 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{66} normal block at 0x0000025F0FECF530, 16 bytes long.
 Data: <  &#214;*&#246;           > 10 04 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x0000025F0FECECC0, 16 bytes long.
 Data: <p &#214;*&#246;           > 70 04 D6 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x0000025F0FECEC20, 16 bytes long.
 Data: < &#192;&#212;*&#246;           > 18 C0 D4 2A F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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