Task 38685258

Name test_989-GPUGRID_TEST_ATM_40STEP_20261023-29-40-RND6001_0
Workunit 31626734
Created 27 Oct 2026, 20:11:59 UTC
Sent 27 Oct 2026, 20:12:01 UTC
Report deadline 1 Nov 2026, 20:12:01 UTC
Received 27 Oct 2026, 21:43:22 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 648712
Run time 44 min 21 sec
CPU time 44 min 20 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 6,710.17 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 643.88 MB
Peak swap size 6.76 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>8.2.9</core_client_version>
<![CDATA[
<stderr_txt>
04:58:44 (2804): wrapper (7.9.26016): starting
04:58:44 (2804): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
04:58:45 (2804): Library/usr/bin/tar.exe exited; CPU time 0.000000
04:58:45 (2804): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
05:42:14 (2804): C:/Windows/system32/cmd.exe exited; CPU time 2660.921875
05:42:14 (2804): called boinc_finish(0)
0 bytes in 0 Free Blocks.
256 bytes in 6 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 41354439 bytes.
Dumping objects ->
{3835255} normal block at 0x000001E8D96BA350, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835244} normal block at 0x000001E8D96B9860, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835233} normal block at 0x000001E8D96BA5F0, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835222} normal block at 0x000001E8D96BA740, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835211} normal block at 0x000001E8D96B9940, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835180} normal block at 0x000001E8DCE03780, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
..\api\boinc_api.cpp(309) : {3835167} normal block at 0x000001E8D96B68B0, 8 bytes long.
 Data: <        > 00 00 FD DA E8 01 00 00 
{3834025} normal block at 0x000001E8D96B6D10, 8 bytes long.
 Data: <@       > 40 A1 E9 DC E8 01 00 00 
..\zip\boinc_zip.cpp(122) : {304} normal block at 0x000001E8D96B5170, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001E8D96B60B0, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{288} normal block at 0x000001E8D96B7710, 16 bytes long.
 Data: < fk             > C8 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001E8D96B6DB0, 16 bytes long.
 Data: < fk             > A0 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001E8D96A6460, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{285} normal block at 0x000001E8D96B7620, 16 bytes long.
 Data: <xfk             > 78 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001E8D96B6860, 16 bytes long.
 Data: <Pfk             > 50 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{283} normal block at 0x000001E8D96B6D60, 16 bytes long.
 Data: <(fk             > 28 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001E8D96B69A0, 16 bytes long.
 Data: < fk             > 00 66 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{281} normal block at 0x000001E8D96B06A0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{280} normal block at 0x000001E8D96B7530, 16 bytes long.
 Data: <H`k             > 48 60 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001E8D96A6580, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{278} normal block at 0x000001E8D96B2470, 16 bytes long.
 Data: < `k             > 20 60 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001E8D96B2290, 16 bytes long.
 Data: < _k             > F8 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001E8D96B27E0, 16 bytes long.
 Data: < _k             > D0 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001E8D96B2240, 16 bytes long.
 Data: < _k             > A8 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{273} normal block at 0x000001E8D96B25B0, 16 bytes long.
 Data: < _k             > 80 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001E8D96B2B00, 16 bytes long.
 Data: <X_k             > 58 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{271} normal block at 0x000001E8D96A6AC0, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{270} normal block at 0x000001E8D96B20B0, 16 bytes long.
 Data: <0_k             > 30 5F 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001E8D96B5F30, 320 bytes long.
 Data: <  k      jj     > B0 20 6B D9 E8 01 00 00 C0 6A 6A D9 E8 01 00 00 
{268} normal block at 0x000001E8D96B2060, 16 bytes long.
 Data: < ek             > E0 65 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001E8D96B2FB0, 16 bytes long.
 Data: < ek             > B8 65 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{266} normal block at 0x000001E8D96A63A0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{265} normal block at 0x000001E8D96B2AB0, 16 bytes long.
 Data: < ek             > 90 65 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001E8D96A5FE0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{263} normal block at 0x000001E8D96B2CE0, 16 bytes long.
 Data: < dk             > D8 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001E8D96B29C0, 16 bytes long.
 Data: < dk             > B0 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001E8D96B2A60, 16 bytes long.
 Data: < dk             > 88 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{260} normal block at 0x000001E8D96B2740, 16 bytes long.
 Data: <`dk             > 60 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001E8D96B2D30, 16 bytes long.
 Data: <8dk             > 38 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001E8D96B2C90, 16 bytes long.
 Data: < dk             > 10 64 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001E8D96B2BF0, 16 bytes long.
 Data: <` k             > 60 08 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001E8D96B0860, 40 bytes long.
 Data: < +k      7      > F0 2B 6B D9 E8 01 00 00 80 37 E0 DC E8 01 00 00 
{254} normal block at 0x000001E8D96B26F0, 16 bytes long.
 Data: < ck             > F0 63 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001E8D96B2790, 16 bytes long.
 Data: < ck             > C8 63 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{252} normal block at 0x000001E8D96A6D60, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{251} normal block at 0x000001E8D96B2330, 16 bytes long.
 Data: < ck             > A0 63 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{250} normal block at 0x000001E8D96B63A0, 992 bytes long.
 Data: <0#k     `mj     > 30 23 6B D9 E8 01 00 00 60 6D 6A D9 E8 01 00 00 
{86} normal block at 0x000001E8D96A6400, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{85} normal block at 0x000001E8D96B2DD0, 16 bytes long.
 Data: <0 k             > 30 06 6B D9 E8 01 00 00 00 00 00 00 00 00 00 00 
{84} normal block at 0x000001E8D96B0630, 40 bytes long.
 Data: < -k      dj     > D0 2D 6B D9 E8 01 00 00 00 64 6A D9 E8 01 00 00 
{61} normal block at 0x000001E8D96B2600, 16 bytes long.
 Data: <   J            > 80 EA 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001E8D96B2EC0, 16 bytes long.
 Data: <@  J            > 40 E9 15 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001E8D96B23D0, 16 bytes long.
 Data: < W J            > F8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001E8D96B2A10, 16 bytes long.
 Data: < W J            > D8 57 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001E8D96B2510, 16 bytes long.
 Data: <P  J            > 50 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{56} normal block at 0x000001E8D96B2E70, 16 bytes long.
 Data: <0  J            > 30 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{55} normal block at 0x000001E8D96B2150, 16 bytes long.
 Data: <   J            > E0 02 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{54} normal block at 0x000001E8D96B2380, 16 bytes long.
 Data: <   J            > 10 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{53} normal block at 0x000001E8D96B21A0, 16 bytes long.
 Data: <p  J            > 70 04 12 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
{52} normal block at 0x000001E8D96B2BA0, 16 bytes long.
 Data: <   J            > 18 C0 10 4A F7 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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