Task 38685115

Name test_567-GPUGRID_TEST_ATM_40STEP_20261023-12-40-RND2937_0
Workunit 31626599
Created 27 Oct 2026, 19:27:13 UTC
Sent 27 Oct 2026, 19:27:23 UTC
Report deadline 1 Nov 2026, 19:27:23 UTC
Received 27 Oct 2026, 21:42:03 UTC
Server state Over
Outcome Success
Client state Done
Exit status 0 (0x00000000)
Computer ID 496592
Run time 44 min 1 sec
CPU time 42 min 50 sec
Validate state Valid
Credit 60,000.00
Device peak FLOPS 9,334.82 GFLOPS
Application version ATM: Free energy calculations of protein-ligand binding v1.20 (cuda1121)
windows_x86_64
Peak working set size 674.06 MB
Peak swap size 3.77 GB
Peak disk usage 3.03 GB

Stderr output

<core_client_version>7.24.1</core_client_version>
<![CDATA[
<stderr_txt>
21:57:06 (17012): wrapper (7.9.26016): starting
21:57:06 (17012): wrapper: running Library/usr/bin/tar.exe (xjvf input.tar.bz2)
QB_A34_A12_0.pdb
QB_A34_A12_0.xml
QB_A34_A12_input.yaml
QB_A34_A12.pdb
QB_A34_A12.prmtop
QB_A34_A12_sys.xml
run.bat
run.sh
21:57:07 (17012): Library/usr/bin/tar.exe exited; CPU time 0.000000
21:57:07 (17012): wrapper: running C:/Windows/system32/cmd.exe (/c call Scripts\activate.bat && Scripts\conda-unpack.exe && run.bat)
  WARNING: The script pyaml.exe is installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
  WARNING: The scripts abfe_production.exe, abfe_structprep.exe, make_atm_system_from_amber.exe, make_atm_system_from_pdb.exe, make_atm_system_from_rcpt_lig.exe, rbfe_production.exe and rbfe_structprep.exe are installed in 'C:\ProgramData\BOINC\slots\0\Scripts' which is not on PATH.
  Consider adding this directory to PATH or, if you prefer to suppress this warning, use --no-warn-script-location.
Warning: importing 'simtk.openmm' is deprecated.  Import 'openmm' instead.
tar: run.log: file changed as we read it
tar: r*/*.dcd: Cannot stat: No such file or directory
tar: r*/*.xtc: Cannot stat: No such file or directory
tar: Exiting with failure status due to previous errors
22:41:01 (17012): C:/Windows/system32/cmd.exe exited; CPU time 2570.296875
22:41:01 (17012): called boinc_finish(0)
0 bytes in 0 Free Blocks.
538 bytes in 8 Normal Blocks.
1144 bytes in 1 CRT Blocks.
0 bytes in 0 Ignore Blocks.
0 bytes in 0 Client Blocks.
Largest number used: 0 bytes.
Total allocations: 36525379 bytes.
Dumping objects ->
{3835361} normal block at 0x000001C344930BC0, 48 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835350} normal block at 0x000001C3449308B0, 48 bytes long.
 Data: <HOME=C:\ProgramD> 48 4F 4D 45 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835339} normal block at 0x000001C344931250, 48 bytes long.
 Data: <TMP=C:\ProgramDa> 54 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 61 
{3835328} normal block at 0x000001C344931330, 48 bytes long.
 Data: <TEMP=C:\ProgramD> 54 45 4D 50 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835317} normal block at 0x000001C344930A70, 48 bytes long.
 Data: <TMPDIR=C:\Progra> 54 4D 50 44 49 52 3D 43 3A 5C 50 72 6F 67 72 61 
{3835286} normal block at 0x000001C344A0C310, 64 bytes long.
 Data: <PATH=C:\ProgramD> 50 41 54 48 3D 43 3A 5C 50 72 6F 67 72 61 6D 44 
{3835275} normal block at 0x000001C344AB28C0, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
..\api\boinc_api.cpp(309) : {3835272} normal block at 0x000001C342F16CB0, 8 bytes long.
 Data: <  &#148;D&#195;   > 00 00 94 44 C3 01 00 00 
{3834603} normal block at 0x000001C344AB2170, 141 bytes long.
 Data: <<project_prefere> 3C 70 72 6F 6A 65 63 74 5F 70 72 65 66 65 72 65 
{3833951} normal block at 0x000001C342F17750, 8 bytes long.
 Data: < S D&#195;   > 90 53 99 44 C3 01 00 00 
..\zip\boinc_zip.cpp(122) : {307} normal block at 0x000001C342F21A00, 260 bytes long.
 Data: <                > 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 00 
{292} normal block at 0x000001C342F06020, 80 bytes long.
 Data: </c call Scripts\> 2F 63 20 63 61 6C 6C 20 53 63 72 69 70 74 73 5C 
{291} normal block at 0x000001C342F23170, 16 bytes long.
 Data: <&#248;>&#242;B&#195;           > F8 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{290} normal block at 0x000001C342F236C0, 16 bytes long.
 Data: <&#208;>&#242;B&#195;           > D0 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{289} normal block at 0x000001C342F1C1E0, 32 bytes long.
 Data: <r0/checkpoint.xm> 72 30 2F 63 68 65 63 6B 70 6F 69 6E 74 2E 78 6D 
{288} normal block at 0x000001C342F23210, 16 bytes long.
 Data: <&#168;>&#242;B&#195;           > A8 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{287} normal block at 0x000001C342F23030, 16 bytes long.
 Data: < >&#242;B&#195;           > 80 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{286} normal block at 0x000001C342F231C0, 16 bytes long.
 Data: <X>&#242;B&#195;           > 58 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{285} normal block at 0x000001C342F22FE0, 16 bytes long.
 Data: <0>&#242;B&#195;           > 30 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{284} normal block at 0x000001C342F1D4B0, 48 bytes long.
 Data: <ComSpec=C:\Windo> 43 6F 6D 53 70 65 63 3D 43 3A 5C 57 69 6E 64 6F 
{283} normal block at 0x000001C342F22EA0, 16 bytes long.
 Data: <&#184;_&#240;B&#195;           > B8 5F F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{282} normal block at 0x000001C342F1BA00, 32 bytes long.
 Data: <SystemRoot=C:\Wi> 53 79 73 74 65 6D 52 6F 6F 74 3D 43 3A 5C 57 69 
{281} normal block at 0x000001C342F22E50, 16 bytes long.
 Data: < _&#240;B&#195;           > 90 5F F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{279} normal block at 0x000001C342F230D0, 16 bytes long.
 Data: <h_&#240;B&#195;           > 68 5F F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{278} normal block at 0x000001C342F22E00, 16 bytes long.
 Data: <@_&#240;B&#195;           > 40 5F F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{277} normal block at 0x000001C342F23120, 16 bytes long.
 Data: < _&#240;B&#195;           > 18 5F F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{276} normal block at 0x000001C342F233F0, 16 bytes long.
 Data: <&#240;^&#240;B&#195;           > F0 5E F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{275} normal block at 0x000001C342F22D10, 16 bytes long.
 Data: <&#200;^&#240;B&#195;           > C8 5E F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{274} normal block at 0x000001C342F1B940, 32 bytes long.
 Data: <CUDA_DEVICE=0 PU> 43 55 44 41 5F 44 45 56 49 43 45 3D 30 00 50 55 
{273} normal block at 0x000001C342F22CC0, 16 bytes long.
 Data: <&#160;^&#240;B&#195;           > A0 5E F0 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{272} normal block at 0x000001C342F05EA0, 320 bytes long.
 Data: <&#192;,&#242;B&#195;   @&#185;&#241;B&#195;   > C0 2C F2 42 C3 01 00 00 40 B9 F1 42 C3 01 00 00 
{271} normal block at 0x000001C342F23620, 16 bytes long.
 Data: < >&#242;B&#195;           > 10 3E F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{270} normal block at 0x000001C342F23760, 16 bytes long.
 Data: <&#232;=&#242;B&#195;           > E8 3D F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{269} normal block at 0x000001C342F1B7C0, 32 bytes long.
 Data: <C:/Windows/syste> 43 3A 2F 57 69 6E 64 6F 77 73 2F 73 79 73 74 65 
{268} normal block at 0x000001C342F23490, 16 bytes long.
 Data: <&#192;=&#242;B&#195;           > C0 3D F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{267} normal block at 0x000001C342F1B8E0, 32 bytes long.
 Data: <xjvf input.tar.b> 78 6A 76 66 20 69 6E 70 75 74 2E 74 61 72 2E 62 
{266} normal block at 0x000001C342F22C70, 16 bytes long.
 Data: < =&#242;B&#195;           > 08 3D F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{265} normal block at 0x000001C342F22DB0, 16 bytes long.
 Data: <&#224;<&#242;B&#195;           > E0 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{264} normal block at 0x000001C342F22AE0, 16 bytes long.
 Data: <&#184;<&#242;B&#195;           > B8 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{263} normal block at 0x000001C342F22BD0, 16 bytes long.
 Data: < <&#242;B&#195;           > 90 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{262} normal block at 0x000001C342F228B0, 16 bytes long.
 Data: <h<&#242;B&#195;           > 68 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{261} normal block at 0x000001C342F22A40, 16 bytes long.
 Data: <@<&#242;B&#195;           > 40 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{259} normal block at 0x000001C342F22A90, 16 bytes long.
 Data: < &#217;&#241;B&#195;           > 80 D9 F1 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{258} normal block at 0x000001C342F1D980, 40 bytes long.
 Data: < *&#242;B&#195;    &#195;&#160;D&#195;   > 90 2A F2 42 C3 01 00 00 10 C3 A0 44 C3 01 00 00 
{257} normal block at 0x000001C342F22B80, 16 bytes long.
 Data: < <&#242;B&#195;           > 20 3C F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{256} normal block at 0x000001C342F22D60, 16 bytes long.
 Data: <&#248;;&#242;B&#195;           > F8 3B F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{255} normal block at 0x000001C342F1C240, 32 bytes long.
 Data: <Library/usr/bin/> 4C 69 62 72 61 72 79 2F 75 73 72 2F 62 69 6E 2F 
{254} normal block at 0x000001C342F233A0, 16 bytes long.
 Data: <&#208;;&#242;B&#195;           > D0 3B F2 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{253} normal block at 0x000001C342F23BD0, 992 bytes long.
 Data: <&#160;3&#242;B&#195;   @&#194;&#241;B&#195;   > A0 33 F2 42 C3 01 00 00 40 C2 F1 42 C3 01 00 00 
{89} normal block at 0x000001C342F1BB20, 32 bytes long.
 Data: <windows_x86_64__> 77 69 6E 64 6F 77 73 5F 78 38 36 5F 36 34 5F 5F 
{88} normal block at 0x000001C342F16D50, 16 bytes long.
 Data: < &#213;&#241;B&#195;           > 20 D5 F1 42 C3 01 00 00 00 00 00 00 00 00 00 00 
{87} normal block at 0x000001C342F1D520, 40 bytes long.
 Data: <Pm&#241;B&#195;    &#187;&#241;B&#195;   > 50 6D F1 42 C3 01 00 00 20 BB F1 42 C3 01 00 00 
{66} normal block at 0x000001C342F17110, 16 bytes long.
 Data: < &#234;&&#183;&#246;           > 80 EA 26 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{65} normal block at 0x000001C342F17430, 16 bytes long.
 Data: <@&#233;&&#183;&#246;           > 40 E9 26 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{64} normal block at 0x000001C342F16E90, 16 bytes long.
 Data: <&#248;W#&#183;&#246;           > F8 57 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{63} normal block at 0x000001C342F16C10, 16 bytes long.
 Data: <&#216;W#&#183;&#246;           > D8 57 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{62} normal block at 0x000001C342F16940, 16 bytes long.
 Data: <P #&#183;&#246;           > 50 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{61} normal block at 0x000001C342F16AD0, 16 bytes long.
 Data: <0 #&#183;&#246;           > 30 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{60} normal block at 0x000001C342F16DF0, 16 bytes long.
 Data: <&#224; #&#183;&#246;           > E0 02 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{59} normal block at 0x000001C342F16BC0, 16 bytes long.
 Data: <  #&#183;&#246;           > 10 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{58} normal block at 0x000001C342F168F0, 16 bytes long.
 Data: <p #&#183;&#246;           > 70 04 23 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
{57} normal block at 0x000001C342F16B20, 16 bytes long.
 Data: < &#192;!&#183;&#246;           > 18 C0 21 B7 F6 7F 00 00 00 00 00 00 00 00 00 00 
Object dump complete.

</stderr_txt>
]]>


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